CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63858	Soybean	cytosol	67.0	68.28
KRH54108	Soybean	cytosol	55.62	60.3
Zm00001d049872_P001	Maize	cytosol	41.38	60.29
KRH45201	Soybean	cytosol	60.5	58.81
GSMUA_Achr11P...	Banana	cytosol	59.12	57.97
KRH01512	Soybean	cytosol	59.88	57.09
Zm00001d009353_P001	Maize	cytosol	8.5	56.2
TraesCS5A01G293000.1	Wheat	cytosol	58.12	55.96
TraesCS5B01G292200.1	Wheat	cytosol	58.25	55.88
GSMUA_Achr4P00060_001	Banana	cytosol	58.38	55.79
TraesCS5D01G300300.2	Wheat	cytosol	58.12	55.36
Os09t0510700-01	Rice	cytosol	57.5	55.02
TraesCS7A01G263800.2	Wheat	cytosol	56.5	54.92
HORVU5Hr1G077570.15	Barley	cytosol	57.25	54.72
Os08t0537600-01	Rice	plasma membrane	56.75	54.63
Zm00001d021087_P003	Maize	cytosol	57.12	54.6
HORVU7Hr1G055220.21	Barley	cytosol	56.5	54.39
OQU80812	Sorghum	cytosol	55.88	54.25
EER99172	Sorghum	cytosol	56.62	54.19
Zm00001d031667_P006	Maize	cytosol	55.62	54.07
Zm00001d015981_P001	Maize	peroxisome	10.25	53.59
TraesCS7D01G264700.1	Wheat	endoplasmic reticulum	55.75	52.66
TraesCS7B01G161800.1	Wheat	endoplasmic reticulum	55.75	52.66
GSMUA_Achr7P22530_001	Banana	endoplasmic reticulum	48.62	52.57
Zm00001d004245_P003	Maize	cytosol	11.12	46.35
Zm00001d015278_P001	Maize	mitochondrion	18.75	44.64
KRH24228	Soybean	cytosol	42.75	44.07
KRH29237	Soybean	cytosol	42.62	43.94
Zm00001d049871_P001	Maize	cytosol	8.75	36.65
KRH15700	Soybean	cytosol	7.5	30.93
Zm00001d023982_P001	Maize	cytosol	14.75	30.33
KRH38902	Soybean	cytosol	7.88	25.93
KRH09434	Soybean	cytosol	7.88	25.82
KRH41906	Soybean	cytosol	9.0	24.08
KRH27179	Soybean	cytosol	10.5	17.36
KRH22157	Soybean	cytosol	10.25	17.05
KRH26038	Soybean	cytosol	10.38	16.6
KRH55419	Soybean	cytosol	10.12	15.7
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	7.88	15.63
KRH75607	Soybean	cytosol	7.88	15.63
KRG95812	Soybean	endoplasmic reticulum	8.0	13.09
KRH19707	Soybean	cytosol	7.75	12.89
KRH67539	Soybean	mitochondrion	7.75	12.76
KRH32302	Soybean	mitochondrion	7.62	12.73
KRH30767	Soybean	nucleus	3.12	10.29

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:1.25.40.20	EntrezGene:100792517	MapMan:22.3.4.1	Gene3D:3.30.40.160	EMBL:ACUP02003339
InterPro:AGD1/2/3/4_BAR_plant	InterPro:AH/BAR_dom_sf	InterPro:ARFGAP/RecO	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	InterPro:BAR_dom	ncoils:Coil	EnsemblPlantsGene:GLYMA_05G200700	GO:GO:0003674
GO:GO:0005096	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	UniProt:I1K6T3
InterPro:IPR001164	InterPro:IPR001849	InterPro:IPR002110	InterPro:IPR004148	InterPro:IPR020683	InterPro:IPR027267
InterPro:IPR036770	InterPro:IPR038508	EnsemblPlants:KRH59741	ProteinID:KRH59741	ProteinID:KRH59741.1	PFAM:PF00169
PFAM:PF01412	PFAM:PF13637	PFAM:PF16746	InterPro:PH_domain	PRINTS:PR00405	PFscan:PS50003
PFscan:PS50088	PFscan:PS50115	PFscan:PS50297	PANTHER:PTHR23180	PANTHER:PTHR23180:SF374	SMART:SM00105
SMART:SM00233	SMART:SM00248	SMART:SM00721	SUPFAM:SSF103657	SUPFAM:SSF48403	SUPFAM:SSF50729
SUPFAM:SSF57863	UniParc:UPI00023399C7	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:38429802..38443762

Molecular Weight (calculated)

90324.1 Da

IEP (calculated)

7.220

GRAVY (calculated)

-0.477

Length

800 amino acids

Sequence
(BLAST)

001: MRFTNLDDTP MFRQQLLCLE ENTESLRARC CKFYKGCRKY MEGLRESYNG DIAFASAIEN FGGGHNDPHF VSLGGPVMAK FTIALREIST YKERLRFQVE
101: HIFNDQLLPI VDVDIHEVKE ARKRFDKASL VYDQAREKFM SLKKSTKIDI ATVIEEELQD ARASFEEARF NLVGTLNNIE FKKRFEVLKA VTGIMDAHLR
201: YFQQGYQLLH QLEPLISEIM DYVKQSKESY NQEQISLYER MQDYKKQVYE ESRLSLNGPY GSPSRDSAPP FSRISNEVAD VVMESAANGK VQIIRQGYLS
301: KRSSNLRGDW KRRYFVVDSR GMLYYYRNPY GSNQPSPKRN SGTENGSGLL SRWLSSHYHG GVHDERSVAR HTVSLLTSTI KVDADQSDLR FCFRIISPSK
401: NYTLQAENAV DQMDWMEKIN GVIASLLSVQ TLGMPLSADS ENGDSYSDDN IDKLESSPDD DHTVTVKSAS KNPTPKNQFR SSRSLQLHKH SMRIEKPIDV
501: LRRVSGNDKC ADCGKPEPEW ASLNLGILIC IECSGVHRNL GVHISKVRSL TLDVKVWDPS VLSMLKSLGN LFANSVWEEL LYPPSNLQTV DTPASSSKEN
601: GEEFFHARKP KHDDSISLKE RFIHAKYSEK IFIPRTKKYH PLFSPAQLVL ESIYANDKKA VYQHIIKSDF DINAIGWQAS SDDSFNMVSS NNLNIASQSE
701: IQPIEAIQDG SSVLHLACLT SDIGMVELLL QHGANINACD SRGQTPLHYC IIKGKTAAAK VLIMRGANTY VADKEGKTPV KLASESGCGD DEILALLTSR

Best Arabidopsis Sequence Match ( AT1G10870.1 )
(BLAST)

001: MATFINLEDS PMFQKQVCSL EGTADELKDR CQKLYKGVKK FMGTLGEASK GESAFAACLE EFGGGPDDPI SLSIGGPVIS KFINALRELA SYKEFLCSQV
101: EHVLLERLMN FISVDLQEAK ESRHRFDKAA HSYDQSREKF VSLKKNTRGE IVAELEEDLE NSKSTFEKSR FNLVNSLMTI EAKKKYEFLE SISAIMDAHL
201: RYFKLGYDLL NQLEPFIHQI LTYAQQSKEQ SKIEQDRLAR RIQEFRTQSE LDSQQLVANA ESSGANGNRV GGNIPYKNTE TSLTADKEVI KQGYLLKRSS
301: SLRTDWKRKF FVLDSHGSMY YYRTNGNKSM GSHHHYSGSS DHNTGVFGRF RARHNRSGSL TEGSLGYNTI DLRTSLIKLD AEDMDLRLCF RIISPQKTYT
401: LQAENGADRM DWVNKITKAI GTLLNSHFLQ QSPVRYLDKD NSSSAPANAV VSGDQIRHND SRQNIGDDVS TILRGLPGNN ACAECNAPEP DWASLNLGVL
501: LCIQCSGVHR NLGVHISKVR SLSLDVKVWE PTILDLFRNL GNVYCNSLWE GLLHLDDDCE DGSALSHASV SKPCPEDSFS VKEKYILGKY LEKALVIKDE
601: SEANLSAASR IWEAVQSRNI REIYRLIVTT GDVNIINTKF DDITDIDAYH HIDAAEKAVK KRHDPTVCQR IKESNEPRSC LQGCSLLHVA CHIGDSVLLE
701: LLLQFGADLN IRDYHGRTPL HHCISSGNHK FAKILLRRGA RPSIEDDGGL SVLERAMEMG AITDEELFLL LAECA

Arabidopsis Description

AGD4ARF-GAP domain 4 [Source:TAIR;Acc:AT1G10870]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.