CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26038	Soybean	cytosol	79.26	81.8
KRH22157	Soybean	cytosol	64.34	69.02
KRH30767	Soybean	nucleus	32.36	68.72
KRH27179	Soybean	cytosol	63.37	67.56
VIT_19s0014g03510.t01	Wine grape	cytosol	54.84	59.2
Solyc07g063550.2.1	Tomato	cytosol	52.52	57.05
PGSC0003DMT400049649	Potato	cytosol	51.74	56.21
Bra002995.1-P	Field mustard	cytosol	50.0	54.43
CDY63834	Canola	cytosol	49.81	54.22
Bra022711.1-P	Field mustard	cytosol	48.45	52.97
CDY43044	Canola	cytosol	49.03	52.93
CDY52243	Canola	cytosol	48.26	52.87
AT5G54310.1	Thale cress	cytosol	49.42	52.8
Bra029030.1-P	Field mustard	cytosol	48.64	52.51
CDY43831	Canola	cytosol	49.03	52.49
PGSC0003DMT400064425	Potato	cytosol	47.48	52.02
KRH15700	Soybean	cytosol	19.38	51.55
Solyc10g006850.2.1	Tomato	cytosol	48.26	49.8
CDY64205	Canola	endoplasmic reticulum	46.71	48.88
CDY28774	Canola	endoplasmic reticulum, plasma membrane	46.12	48.28
KRH38902	Soybean	cytosol	21.12	44.86
KRH09434	Soybean	cytosol	20.93	44.26
KRH41906	Soybean	cytosol	22.87	39.46
Zm00001d016547_P001	Maize	cytosol, plastid	28.1	27.26
Zm00001d046873_P001	Maize	cytosol, plastid	28.1	27.26
Zm00001d051030_P001	Maize	cytosol, plastid	28.1	27.26
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	15.89	20.35
KRH75607	Soybean	cytosol	15.7	20.1
KRH32302	Soybean	mitochondrion	16.09	17.33
KRH19707	Soybean	cytosol	15.89	17.05
KRG95812	Soybean	endoplasmic reticulum	16.09	16.97
KRH67539	Soybean	mitochondrion	15.7	16.67
KRH63858	Soybean	cytosol	16.47	10.83
KRH59741	Soybean	cytosol	15.7	10.12
KRH45201	Soybean	cytosol	16.09	10.09
KRH54108	Soybean	cytosol	14.34	10.03
KRH01512	Soybean	cytosol	16.09	9.89
KRH29237	Soybean	cytosol	14.34	9.54
KRH24228	Soybean	cytosol	14.15	9.41

Protein Annotations

EntrezGene:100815076	MapMan:22.3.4.2	Gene3D:3.30.40.160	EMBL:ACUP02004003	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	EnsemblPlantsGene:GLYMA_06G254000	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150
GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164	InterPro:IPR038508	UniProt:K7KXB2
EnsemblPlants:KRH55419	ProteinID:KRH55419	ProteinID:KRH55419.1	PFAM:PF01412	PRINTS:PR00405	PFscan:PS50115
PANTHER:PTHR23180	PANTHER:PTHR23180:SF160	SMART:SM00105	SUPFAM:SSF57863	UniParc:UPI0002950502	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:43241532..43247553

Molecular Weight (calculated)

56558.3 Da

IEP (calculated)

7.730

GRAVY (calculated)

-0.507

Length

516 amino acids

Sequence
(BLAST)

001: MNEKANVSKE LNAKHKKILE GLLKLPENKE CADCKAKGPR WASVNLGIFI CMQCSGIHRS LGVHISKVRS ATLDTWLPEQ VAFIQSMGNE KANSYWEAEL
101: PQHYDRVGIE NFIRAKYEEK RWAARNEKPK SPSSFREEKS PSHWQKPEET KKIQPSNAIP ATRISVPAPP KGPELVTPMA KPQHVEKVEP VAPPPQAETS
201: KQTTETTQNS PPKVDYATDL FDMLSMDDPN EKGSGAANDN NWAGFQSAAE ASEAEKTDAP KAIESTPQST RQSTSGIEDL FKDSPSVTPS LTPEKPQKDL
301: KNDIMSLFEK SNVVSPFAMH QQQLAMLAQQ QSLLMAAAKS AGGDPKYLAS LQQQQSLLMA AAAAKSGGTD SKYLASIQEP GSNIPLQSWL GAGYPMPGAM
401: PMGSQEELQK LMQTVNMNAA HSAGSSVQYP PSRYTDLLIK SLLNFSLGNL LGILLELLSS YDSELSWVDI GANQKDSRFP KSKLISYVCS VGCAAKRLFR
501: GFCLHCVNYL ILNTCQ

Best Arabidopsis Sequence Match ( AT3G17660.1 )
(BLAST)

001: MNRKASVSKE LNAKHSKILE ALLKHPDNRE CADCRSKAPR WASVNLGIFI CMQCSGIHRS LGVHISQVRS ITLDTWLPDQ VAFMKSTGNA KGNEYWESEL
101: PQHFERSSSD TFIRAKYSEK RWVSPGAIQP APIVSQLSCK VSHLVESGYK PETPKKARTL SLDEEILLHH VLQVTPPETR TRAGSVDMKE NVYVVPLPEF
201: KKPNQKNENF SSEVNQNRRT TIAPPSSWAT FD

Arabidopsis Description

AGD15ARF-GAP domain 15 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR18]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.