Factsheet for Bra022711.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28774	Canola	endoplasmic reticulum, plasma membrane	96.19	92.09
Bra002995.1-P	Field mustard	cytosol	88.56	88.19
Bra029030.1-P	Field mustard	cytosol	86.86	85.77
AT5G54310.1	Thale cress	cytosol	85.17	83.23
VIT_19s0014g03510.t01	Wine grape	cytosol	62.29	61.51
Solyc07g063550.2.1	Tomato	cytosol	58.26	57.89
PGSC0003DMT400049649	Potato	cytosol	57.84	57.47
KRH22157	Soybean	cytosol	58.05	56.96
KRH27179	Soybean	cytosol	57.42	55.99
KRH26038	Soybean	cytosol	59.11	55.8
PGSC0003DMT400064425	Potato	cytosol	51.48	51.59
Solyc10g006850.2.1	Tomato	cytosol	51.69	48.8
KRH55419	Soybean	cytosol	52.97	48.45
KRH30767	Soybean	nucleus	23.73	46.09
Bra021263.1-P	Field mustard	cytosol	25.0	43.07
Zm00001d016547_P001	Maize	cytosol, plastid	29.24	25.94
Zm00001d046873_P001	Maize	cytosol, plastid	29.24	25.94
Zm00001d051030_P001	Maize	cytosol, plastid	29.24	25.94
Bra024999.1-P	Field mustard	cytosol	15.25	19.73
Bra013265.1-P	Field mustard	cytosol	15.47	18.53
Bra039812.1-P	Field mustard	cytosol	17.16	17.96
Bra017330.1-P	Field mustard	cytosol	14.62	17.51
Bra007020.1-P	Field mustard	cytosol	16.74	17.4
Bra005187.1-P	Field mustard	cytosol	15.89	17.01
Bra000005.1-P	Field mustard	mitochondrion	17.16	16.98
Bra017179.1-P	Field mustard	cytosol	15.68	16.78
Bra026910.1-P	Field mustard	plastid	4.03	10.5
Bra010046.1-P	Field mustard	cytosol	17.16	10.24
Bra019896.1-P	Field mustard	cytosol	16.1	9.87
Bra006193.1-P	Field mustard	cytosol	16.74	9.72
Bra008838.1-P	Field mustard	cytosol	16.95	9.69
Bra029295.1-P	Field mustard	cytosol	17.58	9.63
Bra027124.1-P	Field mustard	cytosol	13.56	8.41
Bra012634.1-P	Field mustard	cytosol	15.68	7.23

Protein Annotations

MapMan:22.3.4.2	Gene3D:3.30.40.160	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	EnsemblPlantsGene:Bra022711
EnsemblPlants:Bra022711.1	EnsemblPlants:Bra022711.1-P	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150
GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164	InterPro:IPR038508	UniProt:M4E1R1
PFAM:PF01412	PRINTS:PR00405	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF160	SMART:SM00105
SUPFAM:SSF57863	UniParc:UPI0002546868	SEG:seg	:	:	:

Description

AT5G54310 (E=2e-175) AGD5 | AGD5 (ARF-GAP domain 5); ARF GTPase activator/ DNA binding / zinc ion binding

Coordinates

chrA02:+:7862540..7865937

Molecular Weight (calculated)

51262.4 Da

IEP (calculated)

8.309

GRAVY (calculated)

-0.589

Length

472 amino acids

Sequence
(BLAST)

001: MNEKANVSKE LNARHRKILE GLLKHPENRE CADCKTKGPR WASVNLGIFI CMQCSGIHRS LGVHISKVRS ATLDTWLPEQ VAFIQSMGNE RANSYWEAEL
101: PPTYDRVGIE NFIRAKYEEK RWVSKGEKAR SPPRVEQARR SMERTVPGYE HGHTSSPPVN LFEEKKAVQA PRTRYSVSAT RISLPVPPQG PAQVIKPQQK
201: VESVETTKAA VTVAPAPEPP KVDFATDLFD MLSMDEPTAN TSEAVPADDN WAGFQSAGNG QTVEKSVAAK PDEISSPPAT GIEDLFKDTP TLVAQQTPQK
301: DVKGDIMSIF EKTNIVSPFA MHQQQVAMLA QQQALYMAAA KAAGGTPNGS NQQAVANALL ASANWSNTGY QIPGMTNPGG GQADHLQKLM QNMNMNANMN
401: VRPAQPQAST PQYPVSSFYT TGQANPAANG MTPNTTVKPQ SSSSSATSTT PSSQTGKDFD FSSLMDGMFT KH

Best Arabidopsis Sequence Match ( AT5G54310.1 )
(BLAST)

001: MNEKANVSKE LNARHRKILE GLLKHPENRE CADCKTKGPR WASVNLGIFI CMQCSGIHRS LGVHISKVRS ATLDTWLPEQ VAFIQSMGND KANSYWEAEL
101: PPNYDRVGIE NFIRAKYEEK RWVSRGEKAR SPPRVEQERR KSVERSGPGY EHGHSSSPVN LFEERKTIPA SRTRNNVAAT RINLPVPPQG PSQVIKPQQK
201: MESAATPVER EKQAVNVAPA SDPPKVDFAT DLFNMLSMDD STTNTSEATP GDTPADDNSW AGFQSAGSGQ TAEKIVTAKP AESSSPPASS SDFEDLFKDT
301: PNLTTQQAPK DVKGDIMSLF EKTNIVSPFA MHQQQVAMLA QQQALYMAAA KAAGGTPNGV NQQAIANALN VASANWSNPG GYQIPGMTNP VGGQADLQKL
401: MQNMNMNANM NTRPAQPQEN TLQYPSSSFY TMGQANQVNG MTPNSTGKPQ SSSATQPTST TPSSQSGKDF DFSSLMDGMF TKH

Arabidopsis Description

AGD5Nevershed [Source:UniProtKB/TrEMBL;Acc:C4NZX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.