Factsheet for Zm00001d016547_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046873_P001	Maize	cytosol, plastid	99.44	99.44
Zm00001d051030_P001	Maize	cytosol, plastid	99.44	99.44
Zm00001d006602_P001	Maize	cytosol	40.04	42.94
KRH30767	Soybean	nucleus	18.61	40.74
Zm00001d021802_P001	Maize	cytosol	35.34	39.25
VIT_19s0014g03510.t01	Wine grape	cytosol	29.14	32.43
Solyc07g063550.2.1	Tomato	cytosol	27.63	30.95
PGSC0003DMT400049649	Potato	cytosol	27.44	30.74
KRH22157	Soybean	cytosol	27.63	30.56
KRH26038	Soybean	cytosol	28.38	30.2
CDY43044	Canola	cytosol	26.88	29.92
CDY43831	Canola	cytosol	27.07	29.88
Bra002995.1-P	Field mustard	cytosol	26.5	29.75
CDY63834	Canola	cytosol	26.5	29.75
Bra029030.1-P	Field mustard	cytosol	26.69	29.71
AT5G54310.1	Thale cress	cytosol	26.69	29.4
Bra022711.1-P	Field mustard	cytosol	25.94	29.24
KRH27179	Soybean	cytosol	26.5	29.13
CDY52243	Canola	cytosol	25.75	29.09
PGSC0003DMT400064425	Potato	cytosol	25.38	28.66
KRH55419	Soybean	cytosol	27.26	28.1
CDY64205	Canola	endoplasmic reticulum	25.94	27.99
CDY28774	Canola	endoplasmic reticulum, plasma membrane	25.38	27.38
Solyc10g006850.2.1	Tomato	cytosol	25.19	26.8
Zm00001d007856_P001	Maize	cytosol	8.83	17.28
Zm00001d015981_P001	Maize	peroxisome	4.51	15.69
Zm00001d004245_P003	Maize	cytosol	4.89	13.54
Zm00001d047793_P001	Maize	extracellular, plasma membrane	11.09	13.02
Zm00001d028656_P001	Maize	mitochondrion	10.71	12.56
Zm00001d034885_P002	Maize	cytosol	9.77	12.5
Zm00001d012827_P002	Maize	cytosol	9.21	11.64
Zm00001d009353_P001	Maize	cytosol	2.63	11.57
Zm00001d047020_P002	Maize	cytosol	8.65	10.45
Zm00001d015278_P001	Maize	mitochondrion	6.39	10.12
Zm00001d030031_P002	Maize	plastid	8.27	9.11
Zm00001d021087_P003	Maize	cytosol	14.29	9.08
Zm00001d049871_P001	Maize	cytosol	3.2	8.9
Zm00001d049872_P001	Maize	cytosol	8.83	8.56
Zm00001d031667_P006	Maize	cytosol	12.78	8.26
Zm00001d051187_P009	Maize	plastid	10.71	8.09
Zm00001d051188_P001	Maize	cytosol	1.69	6.82
Zm00001d023982_P001	Maize	cytosol	3.95	5.4
Zm00001d031462_P001	Maize	endoplasmic reticulum, extracellular	1.88	5.24
Zm00001d016932_P001	Maize	endoplasmic reticulum	1.32	3.83
Zm00001d032879_P001	Maize	extracellular	1.32	3.23

Protein Annotations

EnsemblPlants:Zm00001d016547_P001	EnsemblPlants:Zm00001d016547_T001	EnsemblPlantsGene:Zm00001d016547	Gene3D:3.30.40.160	InterPro:ArfGAP_dom_sf	InterPro:IPR038508
PANTHER:PTHR10579	PANTHER:PTHR10579:SF55	ProteinID:AQK71137.1	SEG:seg	UniParc:UPI0008453D66	UniProt:A0A1D6H8U2
MapMan:22.3.4.2	:	:	:	:	:

Description

Probable ADP-ribosylation factor GTPase-activating protein AGD5

Coordinates

chr5:-:166951999..166958518

Molecular Weight (calculated)

57632.8 Da

IEP (calculated)

5.172

GRAVY (calculated)

-0.535

Length

532 amino acids

Sequence
(BLAST)

001: MLLSDTQQQQ QQSAAPENSS RKQFGRPAVA PATRFTHVEI PIGPGDPPPL VSECEEEPPV EHAFAKCLGG LVSVVMQEVH LELAFPTGEI TAVYSCRPGQ
101: QVVAVFGGTG VSMRLGEMYA EEERELLVEV RAPLGSHPHS LTVRCMYRNP ASQETMNESL FTCELSKQTL SSVKDTVEMA VKKWGEKSLT ELEAEKRLSY
201: SCEKVITAGA MGNEKANSHW EAELPPKYDR VGIENFIRAK YEDKRWVPRN GTLRLSSGVR DEKSQESPAS ANWSGHHRSS FEQNHASPAL PSKVAPVASR
301: IPSQASPQPP KVEPPVPKVV SPPQPQKSPA KVEATPPKVE KPSVAPPPKV DYATDLFNML SMDGTIEKEP ESSPNDDNAW DGFQSAQPVP SSEEKDSAKP
401: AESKTQSTSG IEDLFKDSPA VSLSSAPVVS QENAKNDIMS LFEKSDMASP FAVQQQQLAF MSQQQALLMA ALKAGNSPQI VPGNANQLNT NISNPPLGTL
501: PFQNWTNLGY QNPGLTLAAA QNGATMRSIS VS

Best Arabidopsis Sequence Match ( AT5G54310.1 )
(BLAST)

001: MNEKANVSKE LNARHRKILE GLLKHPENRE CADCKTKGPR WASVNLGIFI CMQCSGIHRS LGVHISKVRS ATLDTWLPEQ VAFIQSMGND KANSYWEAEL
101: PPNYDRVGIE NFIRAKYEEK RWVSRGEKAR SPPRVEQERR KSVERSGPGY EHGHSSSPVN LFEERKTIPA SRTRNNVAAT RINLPVPPQG PSQVIKPQQK
201: MESAATPVER EKQAVNVAPA SDPPKVDFAT DLFNMLSMDD STTNTSEATP GDTPADDNSW AGFQSAGSGQ TAEKIVTAKP AESSSPPASS SDFEDLFKDT
301: PNLTTQQAPK DVKGDIMSLF EKTNIVSPFA MHQQQVAMLA QQQALYMAAA KAAGGTPNGV NQQAIANALN VASANWSNPG GYQIPGMTNP VGGQADLQKL
401: MQNMNMNANM NTRPAQPQEN TLQYPSSSFY TMGQANQVNG MTPNSTGKPQ SSSATQPTST TPSSQSGKDF DFSSLMDGMF TKH

Arabidopsis Description

AGD5Nevershed [Source:UniProtKB/TrEMBL;Acc:C4NZX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.