Factsheet for Zm00001d030031_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047020_P002	Maize	cytosol	78.26	85.91
Os10t0574800-01	Rice	plasma membrane	71.43	84.77
TraesCS1A01G193000.1	Wheat	cytosol	69.36	82.72
TraesCS1D01G196700.1	Wheat	cytosol	69.15	82.47
TraesCS1B01G207900.1	Wheat	mitochondrion, plastid	72.46	74.31
GSMUA_Achr2P18150_001	Banana	cytosol	57.35	68.56
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	56.94	68.24
KRH75607	Soybean	cytosol	56.73	67.99
VIT_02s0012g01330.t01	Wine grape	cytosol	56.94	67.9
GSMUA_Achr4P28870_001	Banana	cytosol	56.52	67.57
Zm00001d034885_P002	Maize	cytosol	57.76	67.07
GSMUA_Achr11P...	Banana	cytosol	54.66	65.67
GSMUA_Achr4P21720_001	Banana	cytosol	55.07	65.52
Solyc08g005070.2.1	Tomato	cytosol	54.45	65.42
PGSC0003DMT400002955	Potato	cytosol	54.24	64.53
Zm00001d012827_P002	Maize	cytosol	56.11	64.37
CDY44506	Canola	cytosol	51.35	62.63
Solyc08g076920.2.1	Tomato	nucleus	53.42	62.62
Bra013265.1-P	Field mustard	cytosol	50.93	62.44
CDX78809	Canola	cytosol	50.31	62.15
PGSC0003DMT400045159	Potato	cytosol	53.0	62.14
CDY58500	Canola	cytosol	51.35	61.85
CDX77687	Canola	cytosol	51.35	61.69
Bra024999.1-P	Field mustard	cytosol	46.17	61.1
CDY01499	Canola	cytosol	51.35	60.93
CDX90439	Canola	cytosol	51.55	60.73
AT5G46750.1	Thale cress	cytosol	50.31	60.45
AT4G17890.1	Thale cress	cytosol	51.14	59.81
AT2G35210.1	Thale cress	cytosol	48.24	58.99
CDY59045	Canola	cytosol	46.79	57.51
Bra017330.1-P	Field mustard	cytosol	46.17	56.6
Zm00001d009353_P001	Maize	cytosol	6.42	25.62
Bra012634.1-P	Field mustard	cytosol	51.55	24.34
Zm00001d015981_P001	Maize	peroxisome	6.42	20.26
Zm00001d004245_P003	Maize	cytosol	7.87	19.79
Zm00001d007856_P001	Maize	cytosol	10.77	19.12
Zm00001d047793_P001	Maize	extracellular, plasma membrane	16.77	17.88
Zm00001d028656_P001	Maize	mitochondrion	16.77	17.84
Zm00001d006602_P001	Maize	cytosol	15.94	15.52
Zm00001d021802_P001	Maize	cytosol	15.11	15.24
Zm00001d015278_P001	Maize	mitochondrion	8.07	11.61
Zm00001d049871_P001	Maize	cytosol	4.55	11.52
Zm00001d049872_P001	Maize	cytosol	9.73	8.56
Zm00001d031667_P006	Maize	cytosol	14.29	8.38
Zm00001d051188_P001	Maize	cytosol	2.28	8.33
Zm00001d016547_P001	Maize	cytosol, plastid	9.11	8.27
Zm00001d046873_P001	Maize	cytosol, plastid	9.11	8.27
Zm00001d051030_P001	Maize	cytosol, plastid	9.11	8.27
Zm00001d023982_P001	Maize	cytosol	6.63	8.23
Zm00001d021087_P003	Maize	cytosol	13.46	7.77
Zm00001d051187_P009	Maize	plastid	9.11	6.24
Zm00001d032879_P001	Maize	extracellular	2.28	5.07
Zm00001d016932_P001	Maize	endoplasmic reticulum	1.24	3.28
Zm00001d031462_P001	Maize	endoplasmic reticulum, extracellular	1.24	3.14

Protein Annotations

EntrezGene:103637695	MapMan:22.3.4.2	Gene3D:3.30.40.160	UniProt:A0A1D6K975	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234
GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164	InterPro:IPR038508	ProteinID:ONM00055.1	ProteinID:ONM00056.1
PFAM:PF01412	PRINTS:PR00405	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF381	SMART:SM00105
SUPFAM:SSF57863	UniParc:UPI0002213FAB	EnsemblPlantsGene:Zm00001d030031	EnsemblPlants:Zm00001d030031_P002	EnsemblPlants:Zm00001d030031_T002	SEG:seg

Description

ADP-ribosylation factor GTPase-activating protein AGD10

Coordinates

chr1:+:100836103..100840993

Molecular Weight (calculated)

52164.2 Da

IEP (calculated)

10.136

GRAVY (calculated)

-0.553

Length

483 amino acids

Sequence
(BLAST)

001: MRINVCGCRG STVHLHHLSS SSSPPPLPFH LLPPGDSSSS LPRRSIGPPI DRARGRRFQS GVVSIRSGSL PVWVGAMAAM DASADKNAVF RKLRAKSDNK
101: MCFDCNAKNP TWASVTYGVF LCIDCSAAHR SLGVHVSFVR STNLDSWTPE QLKMMVYGGN NRAQAFFKQH GWTDGGKIEA KYTSRAADLY RQLLAKDVAK
201: SSTEDGNNSW PSSPVAASQA PNQAAAFPDL KLTEVSKENV SEKKDSEIVR SPRAPTHSFK KPIGAKKPGN KTGGLGARKL TSKPNESLYE QKPEEPAPVL
301: PSSVIESTTT RSKSHTSRFD YVENAPALKN GNSSEGNHMS GHVAPPMSSN FFAEFGMDSG YQKKSTSSSS KVQIEESREA RQKFSKAKSI SSSQFFGDQA
401: SFEKDAQVSL QKFSGSSAIS SADLFGHPAN NSSVDLSASD LINRISFQAT QDLSSLKNMA GETGKKLTSM ASNIITDLQD RIL

Best Arabidopsis Sequence Match ( AT2G35210.1 )
(BLAST)

001: MASENLNDKI SVFKKLKAKS DNKICFDCNA KNPTWASVTY GIFLCIDCSA VHRSLGVHIS FVRSTNLDSW SSEQLKMMIY GGNNRAQVFF KQYGWSDGGK
101: TEAKYTSRAA DLYKQILAKE VAKSKAEEEL DLPPSPPDST QVPNGLSSIK TSEALKESNT LKQQEKPDVV PVSPRISRSV KKPLGAKKTG KTGGLGARKL
201: TTKSSGTLYD QKPEESVIIQ ATSPVSAKSA RSSFSSRFDY ADNVQNREDY MSPQVVSHVA PPKSSGFFEE ELEMNGGRFQ KKPITSSSKL QIQETDEARK
301: KFTNAKSISS AQYFGNDNNS ADLEAKSSLK KFSGSSAISS ADLFGDGDGD FPLDLTAGDL LNRLSLQAQQ DISSLKNMAE ETKKKLGSVA SSLWV

Arabidopsis Description

AGD10RPA [Source:UniProtKB/TrEMBL;Acc:A0A178VQN0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.