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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013265.1-P Field mustard cytosol 97.95 97.21
CDY44506 Canola cytosol 94.63 93.43
CDX90439 Canola cytosol 90.79 86.59
CDY01499 Canola cytosol 90.03 86.49
AT4G17890.1 Thale cress cytosol 90.28 85.47
CDY58500 Canola cytosol 76.21 74.31
CDX77687 Canola cytosol 75.7 73.63
KRH45437 Soybean endoplasmic reticulum, mitochondrion 69.05 67.0
VIT_02s0012g01330.t01 Wine grape cytosol 69.05 66.67
KRH75607 Soybean cytosol 68.03 66.0
Solyc08g005070.2.1 Tomato cytosol 65.22 63.43
Solyc08g076920.2.1 Tomato nucleus 66.5 63.11
PGSC0003DMT400002955 Potato cytosol 65.22 62.81
PGSC0003DMT400045159 Potato cytosol 65.73 62.38
GSMUA_Achr4P28870_001 Banana cytosol 64.45 62.38
GSMUA_Achr2P18150_001 Banana cytosol 63.68 61.63
GSMUA_Achr11P... Banana cytosol 63.17 61.44
CDY08879 Canola cytosol 49.36 61.27
GSMUA_Achr4P21720_001 Banana cytosol 63.17 60.84
Os10t0574800-01 Rice plasma membrane 63.17 60.69
EER91883 Sorghum cytosol 63.17 60.69
TraesCS1A01G193000.1 Wheat cytosol 61.89 59.75
TraesCS1D01G196700.1 Wheat cytosol 61.38 59.26
CDY59045 Canola cytosol 57.54 57.25
Zm00001d034885_P002 Maize cytosol 60.36 56.73
Os03t0854100-01 Rice cytosol 59.59 56.55
Zm00001d012827_P002 Maize cytosol 60.87 56.53
EER90493 Sorghum cytosol 59.85 56.25
Zm00001d047020_P002 Maize cytosol 62.66 55.68
TraesCS4A01G323700.1 Wheat cytosol, nucleus, peroxisome, plastid 57.29 54.11
TraesCS5D01G554100.1 Wheat cytosol, nucleus, peroxisome, plastid 56.78 53.62
TraesCS1B01G207900.1 Wheat mitochondrion, plastid 61.89 51.38
Zm00001d030031_P002 Maize plastid 62.15 50.31
TraesCS5B01G554600.1 Wheat cytosol, plastid 56.52 47.84
HORVU5Hr1G123590.1 Barley cytosol 57.03 45.79
CDY71222 Canola cytosol 9.46 38.54
HORVU1Hr1G047800.23 Barley plastid 20.72 23.96
CDY18435 Canola cytosol 22.51 20.85
CDX95838 Canola cytosol 13.3 20.47
CDY07784 Canola mitochondrion 22.25 20.09
CDX92147 Canola cytosol 12.79 19.68
CDY30849 Canola cytosol 22.51 19.64
CDY69342 Canola mitochondrion 21.99 19.63
CDX74953 Canola cytosol 22.51 19.47
CDX79739 Canola mitochondrion 22.51 19.43
CDX76193 Canola cytosol 22.25 19.29
CDX73533 Canola cytosol 21.48 18.83
CDX78196 Canola cytosol 21.23 18.65
CDY43044 Canola cytosol 19.44 15.9
CDY63834 Canola cytosol 18.93 15.61
CDY43831 Canola cytosol 19.18 15.56
CDY52243 Canola cytosol 18.41 15.29
CDY64205 Canola endoplasmic reticulum 18.41 14.6
CDY28774 Canola endoplasmic reticulum, plasma membrane 17.9 14.2
CDY53619 Canola cytosol 9.21 10.68
CDY16083 Canola cytosol 5.12 8.47
CDX86943 Canola cytosol 15.35 8.43
CDY23645 Canola cytosol 3.32 8.02
CDY09784 Canola cytosol 16.11 7.89
CDY00242 Canola cytosol 15.6 7.75
CDX69650 Canola cytosol 16.37 7.75
CDX97917 Canola cytosol 15.09 7.67
CDX78515 Canola cytosol 16.11 7.58
CDY19326 Canola cytosol 14.83 7.54
CDY26647 Canola plastid 3.32 7.18
CDY30689 Canola cytosol 15.35 6.96
CDY40502 Canola cytosol 13.55 6.95
CDY54764 Canola cytosol 13.04 6.69
CDX70496 Canola cytosol 7.67 5.42
CDX86944 Canola cytosol 0.51 1.53
Protein Annotations
MapMan:22.3.4.2Gene3D:3.30.40.160GO:A0A078CRX5InterPro:ARFGAP/RecOInterPro:ArfGAP_domInterPro:ArfGAP_dom_sf
EnsemblPlants:CDX78809ProteinID:CDX78809ProteinID:CDX78809.1GO:GO:0003674GO:GO:0005096GO:GO:0008150
GO:GO:0030234EnsemblPlantsGene:GSBRNA2T00131279001InterPro:IPR001164InterPro:IPR038508PFAM:PF01412PRINTS:PR00405
PFscan:PS50115PANTHER:PTHR23180PANTHER:PTHR23180:SF381SMART:SM00105SUPFAM:SSF57863UniParc:UPI0004EF27C4
SEG:seg:::::
Description
BnaA01g08760D
Coordinates
chrLK031816:+:188547..192313
Molecular Weight (calculated)
42231.9 Da
IEP (calculated)
9.346
GRAVY (calculated)
-0.615
Length
391 amino acids
Sequence
(BLAST)
001: MASSENLTDK NIVFRKLKSK SENKVCFDCS AKNPTWASVT YGVFLCIDCS ATHRSLGVHI SFVRSTNLDS WSSEQLRTMM FGGNNRAQVF FKQHGWTDGG
101: KIEAKYTSRA ADLYRQILAK EVSKAISQED TTNALPESPV AAESSNGVSS YSVKETSSPK ASNTVVPSTF KKPIGAKRTG KTGGLGARKL TTKPTGNLYE
201: QKPEEVAPII PPPASSTNNG GSKSSSYASR FEYNDDFQSG GQSVGGTHVA PPKSSSFFSD FGMDSSYPKK PSSNSSKSQV EESDEARKKF TNAKSISSAQ
301: YFGDQNKNAD LESKATLQKF SGSASISSAD FFGHGQDDYS NVDITATDLI NRLSFQAQQD ISSVMNIAGE TKKKLGTFAS GIFSDLQDRM L
Best Arabidopsis Sequence Match ( AT4G17890.1 )
(BLAST)
001: MASSSADNLT DKNIVFRKLK SKSENKVCFD CSAKNPTWAS VTYGIFLCID CSATHRNLGV HISFVRSTNL DSWSPEQLRT MMFGGNNRAQ VFFKQHGWTD
101: GGKIEAKYTS RAADLYRQIL AKEVAKAIAE ETNSGLLSSP VATSQLPEVS NGVSSYSVKE ELPLSKHEAT SATSSPKASN TVVPSTFKKP IGAKRTGKTG
201: GLGARKLTTK PKDNLYEQKP EEVAPVIPAV SSTNNGESKS SAGSSFASRF EYNDDLQSGG QSVGGTQVLN HVAPPKSSSF FSDFGMDSSF PKKSSSNSSK
301: SQVEESDEAR KKFTNAKSIS SAQYFGDQNK NADLESKATL QKFAGSASIS SADFYGHDQD DSNIDITASD LINRLSFQAQ QDLSSLVNIA GETKKKLGTL
401: ASGIFSDIQD RML
Arabidopsis Description
AGD8Probable ADP-ribosylation factor GTPase-activating protein AGD8 [Source:UniProtKB/Swiss-Prot;Acc:Q8H100]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.