Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90439 | Canola | cytosol | 98.28 | 97.56 |
| CDX78809 | Canola | cytosol | 86.49 | 90.03 |
| CDY44506 | Canola | cytosol | 86.49 | 88.89 |
| AT4G17890.1 | Thale cress | cytosol | 88.7 | 87.41 |
| CDX77687 | Canola | cytosol | 74.69 | 75.62 |
| CDY58500 | Canola | cytosol | 74.45 | 75.56 |
| VIT_02s0012g01330.t01 | Wine grape | cytosol | 70.76 | 71.11 |
| KRH45437 | Soybean | endoplasmic reticulum, mitochondrion | 68.06 | 68.73 |
| KRH75607 | Soybean | cytosol | 67.32 | 67.99 |
| Solyc08g076920.2.1 | Tomato | nucleus | 66.58 | 65.78 |
| Solyc08g005070.2.1 | Tomato | cytosol | 64.37 | 65.17 |
| PGSC0003DMT400045159 | Potato | cytosol | 65.85 | 65.05 |
| PGSC0003DMT400002955 | Potato | cytosol | 64.62 | 64.78 |
| GSMUA_Achr4P28870_001 | Banana | cytosol | 64.13 | 64.6 |
| GSMUA_Achr2P18150_001 | Banana | cytosol | 63.64 | 64.11 |
| GSMUA_Achr11P... | Banana | cytosol | 63.15 | 63.93 |
| CDY08879 | Canola | cytosol | 49.14 | 63.49 |
| GSMUA_Achr4P21720_001 | Banana | cytosol | 62.9 | 63.05 |
| Os10t0574800-01 | Rice | plasma membrane | 62.65 | 62.65 |
| EER91883 | Sorghum | cytosol | 61.18 | 61.18 |
| TraesCS1A01G193000.1 | Wheat | cytosol | 60.69 | 60.99 |
| TraesCS1D01G196700.1 | Wheat | cytosol | 60.44 | 60.74 |
| CDY59045 | Canola | cytosol | 57.99 | 60.05 |
| Zm00001d034885_P002 | Maize | cytosol | 60.93 | 59.62 |
| Zm00001d012827_P002 | Maize | cytosol | 60.93 | 58.91 |
| EER90493 | Sorghum | cytosol | 60.2 | 58.89 |
| Os03t0854100-01 | Rice | cytosol | 58.97 | 58.25 |
| Zm00001d047020_P002 | Maize | cytosol | 61.18 | 56.59 |
| TraesCS4A01G323700.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 56.76 | 55.8 |
| TraesCS5D01G554100.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 56.27 | 55.31 |
| TraesCS1B01G207900.1 | Wheat | mitochondrion, plastid | 60.69 | 52.44 |
| Zm00001d030031_P002 | Maize | plastid | 60.93 | 51.35 |
| TraesCS5B01G554600.1 | Wheat | cytosol, plastid | 56.27 | 49.57 |
| HORVU5Hr1G123590.1 | Barley | cytosol | 56.51 | 47.23 |
| Bra012634.1-P | Field mustard | cytosol | 97.79 | 38.91 |
| CDY71222 | Canola | cytosol | 8.85 | 37.5 |
| HORVU1Hr1G047800.23 | Barley | plastid | 20.15 | 24.26 |
| CDY18435 | Canola | cytosol | 22.6 | 21.8 |
| CDY07784 | Canola | mitochondrion | 22.85 | 21.48 |
| CDY69342 | Canola | mitochondrion | 22.6 | 21.0 |
| CDX92147 | Canola | cytosol | 13.02 | 20.87 |
| CDX95838 | Canola | cytosol | 13.02 | 20.87 |
| CDX74953 | Canola | cytosol | 23.1 | 20.8 |
| CDX79739 | Canola | mitochondrion | 23.1 | 20.75 |
| CDY30849 | Canola | cytosol | 22.6 | 20.54 |
| CDX73533 | Canola | cytosol | 22.11 | 20.18 |
| CDX76193 | Canola | cytosol | 22.36 | 20.18 |
| CDX78196 | Canola | cytosol | 21.87 | 20.0 |
| CDY52243 | Canola | cytosol | 17.94 | 15.5 |
| CDY43044 | Canola | cytosol | 18.18 | 15.48 |
| CDY63834 | Canola | cytosol | 17.94 | 15.4 |
| CDY43831 | Canola | cytosol | 18.18 | 15.35 |
| CDY28774 | Canola | endoplasmic reticulum, plasma membrane | 17.94 | 14.81 |
| CDY64205 | Canola | endoplasmic reticulum | 17.94 | 14.81 |
| CDY16083 | Canola | cytosol | 6.14 | 10.59 |
| CDY23645 | Canola | cytosol | 4.18 | 10.49 |
| CDY53619 | Canola | cytosol | 8.11 | 9.79 |
| CDY26647 | Canola | plastid | 3.93 | 8.84 |
| CDX86943 | Canola | cytosol | 14.25 | 8.15 |
| CDX97917 | Canola | cytosol | 14.25 | 7.54 |
| CDY00242 | Canola | cytosol | 14.5 | 7.5 |
| CDY19326 | Canola | cytosol | 14.0 | 7.41 |
| CDY09784 | Canola | cytosol | 14.25 | 7.27 |
| CDX69650 | Canola | cytosol | 14.5 | 7.14 |
| CDX78515 | Canola | cytosol | 14.25 | 6.98 |
| CDY40502 | Canola | cytosol | 13.02 | 6.95 |
| CDY30689 | Canola | cytosol | 14.5 | 6.84 |
| CDY54764 | Canola | cytosol | 12.04 | 6.43 |
| CDX70496 | Canola | cytosol | 6.63 | 4.88 |
| CDX86944 | Canola | cytosol | 0.98 | 3.05 |
Protein Annotations
| MapMan:22.3.4.2 | Gene3D:3.30.40.160 | GO:A0A078EL76 | InterPro:ARFGAP/RecO | InterPro:ArfGAP_dom | InterPro:ArfGAP_dom_sf |
| EnsemblPlants:CDY01499 | ProteinID:CDY01499 | ProteinID:CDY01499.1 | GO:GO:0003674 | GO:GO:0005096 | GO:GO:0008150 |
| GO:GO:0030234 | EnsemblPlantsGene:GSBRNA2T00112513001 | InterPro:IPR001164 | InterPro:IPR038508 | PFAM:PF01412 | PRINTS:PR00405 |
| PFscan:PS50115 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF381 | SMART:SM00105 | SUPFAM:SSF57863 | UniParc:UPI0004EC1FBF |
| SEG:seg | : | : | : | : | : |
Description
BnaC07g34890D
Coordinates
chrLK031927:+:172083..175840
Molecular Weight (calculated)
43510.5 Da
IEP (calculated)
9.375
GRAVY (calculated)
-0.545
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSDKTAVF RKLKSKSDNK VCFDCSAKNP TWASVTYGIF LCIDCSATHR SLGVHISFVR STNLDSWSPE QLRTMMFGGN NRAQVFFKQH GWTDGGKIEA
101: KYTSRAADLY RQLLAKEVAK AIAEDAAIAL PSSPLAAEGS NGVSSFSVKE ELPPKESFTV KQEATSSPKA SNTVVPSTFK KPIGAKRTGK TGGLGARKLT
201: TKPTGNLYEQ KPEEVAPVIP AATSTNNGGS KSSGGSSSYA ASRFEYNDDF QSGGKSIGGT QVLNHVAPPK SSSSFSDFGM DSYVPKKSSS NSSKAQVEES
301: DEARKKFTNA KSISSAQYFG DQNKNADLES KATLQKFSGS ASISSADFFG HDQDDSNDDI TASDLINRLS FQAQQDISSI VNIAGETKKK LGTLASGIFS
401: DLQDRML
101: KYTSRAADLY RQLLAKEVAK AIAEDAAIAL PSSPLAAEGS NGVSSFSVKE ELPPKESFTV KQEATSSPKA SNTVVPSTFK KPIGAKRTGK TGGLGARKLT
201: TKPTGNLYEQ KPEEVAPVIP AATSTNNGGS KSSGGSSSYA ASRFEYNDDF QSGGKSIGGT QVLNHVAPPK SSSSFSDFGM DSYVPKKSSS NSSKAQVEES
301: DEARKKFTNA KSISSAQYFG DQNKNADLES KATLQKFSGS ASISSADFFG HDQDDSNDDI TASDLINRLS FQAQQDISSI VNIAGETKKK LGTLASGIFS
401: DLQDRML
001: MASSSADNLT DKNIVFRKLK SKSENKVCFD CSAKNPTWAS VTYGIFLCID CSATHRNLGV HISFVRSTNL DSWSPEQLRT MMFGGNNRAQ VFFKQHGWTD
101: GGKIEAKYTS RAADLYRQIL AKEVAKAIAE ETNSGLLSSP VATSQLPEVS NGVSSYSVKE ELPLSKHEAT SATSSPKASN TVVPSTFKKP IGAKRTGKTG
201: GLGARKLTTK PKDNLYEQKP EEVAPVIPAV SSTNNGESKS SAGSSFASRF EYNDDLQSGG QSVGGTQVLN HVAPPKSSSF FSDFGMDSSF PKKSSSNSSK
301: SQVEESDEAR KKFTNAKSIS SAQYFGDQNK NADLESKATL QKFAGSASIS SADFYGHDQD DSNIDITASD LINRLSFQAQ QDLSSLVNIA GETKKKLGTL
401: ASGIFSDIQD RML
101: GGKIEAKYTS RAADLYRQIL AKEVAKAIAE ETNSGLLSSP VATSQLPEVS NGVSSYSVKE ELPLSKHEAT SATSSPKASN TVVPSTFKKP IGAKRTGKTG
201: GLGARKLTTK PKDNLYEQKP EEVAPVIPAV SSTNNGESKS SAGSSFASRF EYNDDLQSGG QSVGGTQVLN HVAPPKSSSF FSDFGMDSSF PKKSSSNSSK
301: SQVEESDEAR KKFTNAKSIS SAQYFGDQNK NADLESKATL QKFAGSASIS SADFYGHDQD DSNIDITASD LINRLSFQAQ QDLSSLVNIA GETKKKLGTL
401: ASGIFSDIQD RML
Arabidopsis Description
AGD8Probable ADP-ribosylation factor GTPase-activating protein AGD8 [Source:UniProtKB/Swiss-Prot;Acc:Q8H100]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.