Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 3
  • cytosol 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69342 Canola mitochondrion 89.82 92.69
Bra005187.1-P Field mustard cytosol 85.4 87.53
CDY07784 Canola mitochondrion 82.52 86.14
CDX79739 Canola mitochondrion 81.86 81.68
CDY23645 Canola cytosol 27.21 75.93
CDY18435 Canola cytosol 69.69 74.64
CDY16083 Canola cytosol 38.94 74.58
CDY30849 Canola cytosol 71.9 72.54
CDX73533 Canola cytosol 71.24 72.2
CDX78196 Canola cytosol 70.8 71.91
CDX76193 Canola cytosol 71.68 71.84
CDY26647 Canola plastid 28.32 70.72
CDY71222 Canola cytosol 7.96 37.5
CDY44506 Canola cytosol 20.35 23.23
CDX95838 Canola cytosol 13.05 23.23
CDY01499 Canola cytosol 20.8 23.1
CDX90439 Canola cytosol 20.8 22.93
CDX78809 Canola cytosol 19.47 22.51
CDX92147 Canola cytosol 12.61 22.44
CDX77687 Canola cytosol 19.69 22.14
CDY58500 Canola cytosol 19.47 21.95
CDY59045 Canola cytosol 16.81 19.34
CDY63834 Canola cytosol 18.58 17.72
CDY43044 Canola cytosol 18.58 17.57
CDY43831 Canola cytosol 18.58 17.43
CDY52243 Canola cytosol 17.7 16.99
CDY64205 Canola endoplasmic reticulum 18.14 16.63
CDY28774 Canola endoplasmic reticulum, plasma membrane 17.04 15.62
CDY53619 Canola cytosol 9.29 12.46
CDY08879 Canola cytosol 8.41 12.06
CDX86943 Canola cytosol 13.72 8.71
CDY09784 Canola cytosol 15.27 8.65
CDX69650 Canola cytosol 15.49 8.47
CDX78515 Canola cytosol 15.27 8.3
CDY00242 Canola cytosol 13.72 7.88
CDX97917 Canola cytosol 13.05 7.67
CDY19326 Canola cytosol 12.83 7.54
CDY30689 Canola cytosol 13.94 7.31
CDY54764 Canola cytosol 11.73 6.96
CDY40502 Canola cytosol 11.28 6.68
CDX70496 Canola cytosol 5.75 4.7
CDX86944 Canola cytosol 0.44 1.53
Protein Annotations
MapMan:22.3.4.2Gene3D:3.30.40.160GO:A0A078CIS5InterPro:ARFGAP/RecOInterPro:ArfGAP_domInterPro:ArfGAP_dom_sf
EnsemblPlants:CDX74953ProteinID:CDX74953ProteinID:CDX74953.1GO:GO:0003674GO:GO:0005096GO:GO:0008150
GO:GO:0030234EnsemblPlantsGene:GSBRNA2T00116960001InterPro:IPR001164InterPro:IPR038508PFAM:PF01412PRINTS:PR00405
PFscan:PS50115PANTHER:PTHR23180PANTHER:PTHR23180:SF35SMART:SM00105SUPFAM:SSF57863UniParc:UPI0004EECA22
SEG:seg:::::
Description
BnaA05g06990D
Coordinates
chrLK031802:+:1628267..1630681
Molecular Weight (calculated)
48419.1 Da
IEP (calculated)
5.371
GRAVY (calculated)
-0.825
Length
452 amino acids
Sequence
(BLAST)
001: MAAAIRLRTL QSQPENKVCV DCSQKNPQWA SISYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSEIQIK KMESGGNERL NGFLARYGIA KETEIVAKYN
101: SNAASVYRDR IQAVAEGRQW RDPPVVKEVV PPLQGSNGGW DDWDNDDSFR SPRRNQSASD FRGYGGGGGG GGGGAPAKSK SSEDIYSRTQ LEASAANKES
201: FFAKRMAENE SKPEGLPPSR GGKYVGFGSS PGPAPRSNHQ SGGGGGDVFS VVSEGFGRLS LVAASAANVV QTGTMEFTSK VKEGGLDNTV SETVNVVATK
301: TTEIGQRTWG IMRGVMAIAS QKVEEFTKEE TSTWNQQNKS EGNGYTNSSL GGSQSSYQNN YLSQSSSGGH HNSYGNSNSW DDWGEEKGTT KKEAAPKVST
401: SKDDDDDGWA GWDDDNDAKD DDDGYYQSGA GDKKSVGHNG KPDTAWTGGG FL
Best Arabidopsis Sequence Match ( AT2G37550.1 )
(BLAST)
001: MAAARRLRTL QSQPENKVCV DCSQKNPQWA SISYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSEIQIK KMDAGGNERL NNFLAQYGIS KETDIISKYN
101: SNAASVYRDR IQALAEGRQW RDPPIVKESV GGGLMNKKPP LSQGGGRDSG NGGWDNWDND DSFRSTDMRR NQSAGDFRSS GGRGAPAKSK SSEDIYSRSQ
201: LEASAANKES FFAKRMAENE SKPEGLPPSQ GGKYVGFGSS PGPAPRSNQQ SGGGDVFSVM SEGFGRLSLV AASAANVVQT GTMEFTSKVK EGGLDQTVSE
301: TVNVVASKTT EIGQRTWGIM KGVMAIASQK VEEFTKEEAS TWNQQNKTEG NGYYQNSGIG NKTANSSFGG SQSSSSGHNN SYRNSNSWDD WGEENNSKKE
401: AAPKVSTSND DDDGGWAGWD DNDAKDDDFY YQPASDKKSV GHNGKSDTAW TGGGFL
Arabidopsis Description
AGD7ADP-ribosylation factor GTPase-activating protein AGD7 [Source:UniProtKB/Swiss-Prot;Acc:O80925]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.