Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 2
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY69342 | Canola | mitochondrion | 89.82 | 92.69 |
Bra005187.1-P | Field mustard | cytosol | 85.4 | 87.53 |
CDY07784 | Canola | mitochondrion | 82.52 | 86.14 |
CDX79739 | Canola | mitochondrion | 81.86 | 81.68 |
CDY23645 | Canola | cytosol | 27.21 | 75.93 |
CDY18435 | Canola | cytosol | 69.69 | 74.64 |
CDY16083 | Canola | cytosol | 38.94 | 74.58 |
CDY30849 | Canola | cytosol | 71.9 | 72.54 |
CDX73533 | Canola | cytosol | 71.24 | 72.2 |
CDX78196 | Canola | cytosol | 70.8 | 71.91 |
CDX76193 | Canola | cytosol | 71.68 | 71.84 |
CDY26647 | Canola | plastid | 28.32 | 70.72 |
CDY71222 | Canola | cytosol | 7.96 | 37.5 |
CDY44506 | Canola | cytosol | 20.35 | 23.23 |
CDX95838 | Canola | cytosol | 13.05 | 23.23 |
CDY01499 | Canola | cytosol | 20.8 | 23.1 |
CDX90439 | Canola | cytosol | 20.8 | 22.93 |
CDX78809 | Canola | cytosol | 19.47 | 22.51 |
CDX92147 | Canola | cytosol | 12.61 | 22.44 |
CDX77687 | Canola | cytosol | 19.69 | 22.14 |
CDY58500 | Canola | cytosol | 19.47 | 21.95 |
CDY59045 | Canola | cytosol | 16.81 | 19.34 |
CDY63834 | Canola | cytosol | 18.58 | 17.72 |
CDY43044 | Canola | cytosol | 18.58 | 17.57 |
CDY43831 | Canola | cytosol | 18.58 | 17.43 |
CDY52243 | Canola | cytosol | 17.7 | 16.99 |
CDY64205 | Canola | endoplasmic reticulum | 18.14 | 16.63 |
CDY28774 | Canola | endoplasmic reticulum, plasma membrane | 17.04 | 15.62 |
CDY53619 | Canola | cytosol | 9.29 | 12.46 |
CDY08879 | Canola | cytosol | 8.41 | 12.06 |
CDX86943 | Canola | cytosol | 13.72 | 8.71 |
CDY09784 | Canola | cytosol | 15.27 | 8.65 |
CDX69650 | Canola | cytosol | 15.49 | 8.47 |
CDX78515 | Canola | cytosol | 15.27 | 8.3 |
CDY00242 | Canola | cytosol | 13.72 | 7.88 |
CDX97917 | Canola | cytosol | 13.05 | 7.67 |
CDY19326 | Canola | cytosol | 12.83 | 7.54 |
CDY30689 | Canola | cytosol | 13.94 | 7.31 |
CDY54764 | Canola | cytosol | 11.73 | 6.96 |
CDY40502 | Canola | cytosol | 11.28 | 6.68 |
CDX70496 | Canola | cytosol | 5.75 | 4.7 |
CDX86944 | Canola | cytosol | 0.44 | 1.53 |
Protein Annotations
MapMan:22.3.4.2 | Gene3D:3.30.40.160 | GO:A0A078CIS5 | InterPro:ARFGAP/RecO | InterPro:ArfGAP_dom | InterPro:ArfGAP_dom_sf |
EnsemblPlants:CDX74953 | ProteinID:CDX74953 | ProteinID:CDX74953.1 | GO:GO:0003674 | GO:GO:0005096 | GO:GO:0008150 |
GO:GO:0030234 | EnsemblPlantsGene:GSBRNA2T00116960001 | InterPro:IPR001164 | InterPro:IPR038508 | PFAM:PF01412 | PRINTS:PR00405 |
PFscan:PS50115 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF35 | SMART:SM00105 | SUPFAM:SSF57863 | UniParc:UPI0004EECA22 |
SEG:seg | : | : | : | : | : |
Description
BnaA05g06990D
Coordinates
chrLK031802:+:1628267..1630681
Molecular Weight (calculated)
48419.1 Da
IEP (calculated)
5.371
GRAVY (calculated)
-0.825
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAIRLRTL QSQPENKVCV DCSQKNPQWA SISYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSEIQIK KMESGGNERL NGFLARYGIA KETEIVAKYN
101: SNAASVYRDR IQAVAEGRQW RDPPVVKEVV PPLQGSNGGW DDWDNDDSFR SPRRNQSASD FRGYGGGGGG GGGGAPAKSK SSEDIYSRTQ LEASAANKES
201: FFAKRMAENE SKPEGLPPSR GGKYVGFGSS PGPAPRSNHQ SGGGGGDVFS VVSEGFGRLS LVAASAANVV QTGTMEFTSK VKEGGLDNTV SETVNVVATK
301: TTEIGQRTWG IMRGVMAIAS QKVEEFTKEE TSTWNQQNKS EGNGYTNSSL GGSQSSYQNN YLSQSSSGGH HNSYGNSNSW DDWGEEKGTT KKEAAPKVST
401: SKDDDDDGWA GWDDDNDAKD DDDGYYQSGA GDKKSVGHNG KPDTAWTGGG FL
101: SNAASVYRDR IQAVAEGRQW RDPPVVKEVV PPLQGSNGGW DDWDNDDSFR SPRRNQSASD FRGYGGGGGG GGGGAPAKSK SSEDIYSRTQ LEASAANKES
201: FFAKRMAENE SKPEGLPPSR GGKYVGFGSS PGPAPRSNHQ SGGGGGDVFS VVSEGFGRLS LVAASAANVV QTGTMEFTSK VKEGGLDNTV SETVNVVATK
301: TTEIGQRTWG IMRGVMAIAS QKVEEFTKEE TSTWNQQNKS EGNGYTNSSL GGSQSSYQNN YLSQSSSGGH HNSYGNSNSW DDWGEEKGTT KKEAAPKVST
401: SKDDDDDGWA GWDDDNDAKD DDDGYYQSGA GDKKSVGHNG KPDTAWTGGG FL
001: MAAARRLRTL QSQPENKVCV DCSQKNPQWA SISYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSEIQIK KMDAGGNERL NNFLAQYGIS KETDIISKYN
101: SNAASVYRDR IQALAEGRQW RDPPIVKESV GGGLMNKKPP LSQGGGRDSG NGGWDNWDND DSFRSTDMRR NQSAGDFRSS GGRGAPAKSK SSEDIYSRSQ
201: LEASAANKES FFAKRMAENE SKPEGLPPSQ GGKYVGFGSS PGPAPRSNQQ SGGGDVFSVM SEGFGRLSLV AASAANVVQT GTMEFTSKVK EGGLDQTVSE
301: TVNVVASKTT EIGQRTWGIM KGVMAIASQK VEEFTKEEAS TWNQQNKTEG NGYYQNSGIG NKTANSSFGG SQSSSSGHNN SYRNSNSWDD WGEENNSKKE
401: AAPKVSTSND DDDGGWAGWD DNDAKDDDFY YQPASDKKSV GHNGKSDTAW TGGGFL
101: SNAASVYRDR IQALAEGRQW RDPPIVKESV GGGLMNKKPP LSQGGGRDSG NGGWDNWDND DSFRSTDMRR NQSAGDFRSS GGRGAPAKSK SSEDIYSRSQ
201: LEASAANKES FFAKRMAENE SKPEGLPPSQ GGKYVGFGSS PGPAPRSNQQ SGGGDVFSVM SEGFGRLSLV AASAANVVQT GTMEFTSKVK EGGLDQTVSE
301: TVNVVASKTT EIGQRTWGIM KGVMAIASQK VEEFTKEEAS TWNQQNKTEG NGYYQNSGIG NKTANSSFGG SQSSSSGHNN SYRNSNSWDD WGEENNSKKE
401: AAPKVSTSND DDDGGWAGWD DNDAKDDDFY YQPASDKKSV GHNGKSDTAW TGGGFL
Arabidopsis Description
AGD7ADP-ribosylation factor GTPase-activating protein AGD7 [Source:UniProtKB/Swiss-Prot;Acc:O80925]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.