Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92147 | Canola | cytosol | 96.85 | 96.85 |
| AT3G17660.2 | Thale cress | nucleus | 79.53 | 82.11 |
| CDY71222 | Canola | cytosol | 29.13 | 77.08 |
| Bra021263.1-P | Field mustard | cytosol | 69.29 | 64.23 |
| KRH15700 | Soybean | cytosol | 39.76 | 52.06 |
| PGSC0003DMT400026308 | Potato | cytosol, endoplasmic reticulum, nucleus | 40.94 | 44.26 |
| KRH09434 | Soybean | cytosol | 40.16 | 41.8 |
| KRH38902 | Soybean | cytosol | 39.37 | 41.15 |
| VIT_17s0053g00430.t01 | Wine grape | cytosol | 41.73 | 41.09 |
| Solyc03g098500.2.1 | Tomato | nucleus | 39.76 | 40.73 |
| KRH41906 | Soybean | cytosol | 39.76 | 33.78 |
| CDY63834 | Canola | cytosol | 44.88 | 24.05 |
| CDY52243 | Canola | cytosol | 44.09 | 23.78 |
| CDY43044 | Canola | cytosol | 43.7 | 23.22 |
| CDY43831 | Canola | cytosol | 43.7 | 23.03 |
| CDY28774 | Canola | endoplasmic reticulum, plasma membrane | 39.76 | 20.49 |
| CDY64205 | Canola | endoplasmic reticulum | 39.76 | 20.49 |
| CDY07784 | Canola | mitochondrion | 24.8 | 14.55 |
| CDY18435 | Canola | cytosol | 24.02 | 14.46 |
| CDY59045 | Canola | cytosol | 21.65 | 13.99 |
| CDX79739 | Canola | mitochondrion | 24.41 | 13.69 |
| CDX78809 | Canola | cytosol | 20.47 | 13.3 |
| CDY69342 | Canola | mitochondrion | 22.83 | 13.24 |
| CDX90439 | Canola | cytosol | 21.26 | 13.17 |
| CDY44506 | Canola | cytosol | 20.47 | 13.13 |
| CDX74953 | Canola | cytosol | 23.23 | 13.05 |
| CDY01499 | Canola | cytosol | 20.87 | 13.02 |
| CDX73533 | Canola | cytosol | 22.83 | 13.0 |
| CDY30849 | Canola | cytosol | 22.44 | 12.72 |
| CDX76193 | Canola | cytosol | 22.44 | 12.64 |
| CDX78196 | Canola | cytosol | 22.05 | 12.58 |
| CDX77687 | Canola | cytosol | 19.68 | 12.44 |
| CDY58500 | Canola | cytosol | 19.29 | 12.22 |
| CDY53619 | Canola | cytosol | 13.39 | 10.09 |
| CDX86943 | Canola | cytosol | 25.59 | 9.13 |
| CDY09784 | Canola | cytosol | 26.38 | 8.4 |
| CDY19326 | Canola | cytosol | 25.2 | 8.32 |
| CDX97917 | Canola | cytosol | 24.8 | 8.19 |
| CDY00242 | Canola | cytosol | 25.2 | 8.13 |
| CDX69650 | Canola | cytosol | 26.38 | 8.11 |
| CDX78515 | Canola | cytosol | 26.38 | 8.06 |
| CDY30689 | Canola | cytosol | 26.38 | 7.77 |
| CDY40502 | Canola | cytosol | 22.44 | 7.47 |
| CDY23645 | Canola | cytosol | 4.72 | 7.41 |
| CDY54764 | Canola | cytosol | 22.05 | 7.35 |
| CDX70496 | Canola | cytosol | 14.17 | 6.51 |
| CDY08879 | Canola | cytosol | 6.69 | 5.4 |
| CDY16083 | Canola | cytosol | 3.94 | 4.24 |
| CDY26647 | Canola | plastid | 1.97 | 2.76 |
| CDX86944 | Canola | cytosol | 0.39 | 0.76 |
Protein Annotations
| MapMan:22.3.4.2 | Gene3D:3.30.40.160 | GO:A0A078E8W4 | InterPro:ARFGAP/RecO | InterPro:ArfGAP_dom | InterPro:ArfGAP_dom_sf |
| EnsemblPlants:CDX95838 | ProteinID:CDX95838 | ProteinID:CDX95838.1 | GO:GO:0003674 | GO:GO:0005096 | GO:GO:0008150 |
| GO:GO:0030234 | EnsemblPlantsGene:GSBRNA2T00101786001 | InterPro:IPR001164 | InterPro:IPR038508 | PFAM:PF01412 | PRINTS:PR00405 |
| PFscan:PS50115 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF160 | SMART:SM00105 | SUPFAM:SSF57863 | UniParc:UPI0004EE2E4F |
Description
BnaC05g35890D
Coordinates
chrLK031891:-:587566..589714
Molecular Weight (calculated)
28471.1 Da
IEP (calculated)
9.515
GRAVY (calculated)
-0.513
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGKASVSKE LNAKHSKILE ALLKHPDNRE CADCRSKAPR WASVNLGVFI CMQCSGIHRS LGVHISQVRS ITLDTWLPDQ VSFMQSTGNA KANQYWESEL
101: PPHFERSSSD AFIRAKYNEK KWVSRGRIQP APVVNQLSCK VSHSVERGHK PETPTKTRTR SLDEDILLKH VLEVTPPETR IRAGSVDMKM KENVYVLPLP
201: VGINVNKPNQ KNEIFSGDLY QNRRTTIAPP SSWATFDCAG AMEGVDCVRS TSMI
101: PPHFERSSSD AFIRAKYNEK KWVSRGRIQP APVVNQLSCK VSHSVERGHK PETPTKTRTR SLDEDILLKH VLEVTPPETR IRAGSVDMKM KENVYVLPLP
201: VGINVNKPNQ KNEIFSGDLY QNRRTTIAPP SSWATFDCAG AMEGVDCVRS TSMI
001: MNRKASVSKE LNAKHSKILE ALLKHPDNRE CADCRSKAPR WASVNLGIFI CMQCSGIHRS LGVHISQVRS ITLDTWLPDQ VAFMKSTGNA KGNEYWESEL
101: PQHFERSSSD TFIRAKYSEK RWVSPGAIQP APIVSQLSCK VSHLVESGYK PETPKKARTL SLDEEILLHH VLQVTPPETR TRAGSVDMKE NVYVVPLPEF
201: KKPNQKNENF SSEVNQNRRT TIAPPSSWAT FDCKAMIQAF LFFIFC
101: PQHFERSSSD TFIRAKYSEK RWVSPGAIQP APIVSQLSCK VSHLVESGYK PETPKKARTL SLDEEILLHH VLQVTPPETR TRAGSVDMKE NVYVVPLPEF
201: KKPNQKNENF SSEVNQNRRT TIAPPSSWAT FDCKAMIQAF LFFIFC
Arabidopsis Description
AGD15ARF-GAP domain 15 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR18]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.