Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026910.1-P | Field mustard | plastid | 73.31 | 95.58 |
| CDY26647 | Canola | plastid | 72.88 | 95.03 |
| CDY23645 | Canola | cytosol | 48.73 | 70.99 |
| CDY07784 | Canola | mitochondrion | 80.51 | 43.88 |
| CDX79739 | Canola | mitochondrion | 79.24 | 41.28 |
| CDX74953 | Canola | cytosol | 74.58 | 38.94 |
| CDY69342 | Canola | mitochondrion | 70.34 | 37.9 |
| CDY18435 | Canola | cytosol | 66.95 | 37.44 |
| CDX78196 | Canola | cytosol | 66.53 | 35.28 |
| CDX73533 | Canola | cytosol | 66.53 | 35.2 |
| CDX76193 | Canola | cytosol | 66.53 | 34.81 |
| CDY30849 | Canola | cytosol | 65.25 | 34.38 |
| Zm00001d007856_P001 | Maize | cytosol | 34.32 | 29.78 |
| Os03t0278400-01 | Rice | plasma membrane | 54.66 | 28.48 |
| KRH32302 | Soybean | mitochondrion | 56.36 | 27.77 |
| PGSC0003DMT400023046 | Potato | mitochondrion | 54.66 | 27.62 |
| Solyc09g010520.2.1 | Tomato | nucleus | 54.24 | 27.41 |
| KRH19707 | Soybean | cytosol | 55.51 | 27.23 |
| EER92462 | Sorghum | mitochondrion | 52.54 | 27.13 |
| Solyc10g084690.1.1 | Tomato | mitochondrion | 52.12 | 26.8 |
| PGSC0003DMT400028571 | Potato | mitochondrion | 52.12 | 26.8 |
| Zm00001d047793_P001 | Maize | extracellular, plasma membrane | 51.27 | 26.71 |
| Zm00001d028656_P001 | Maize | mitochondrion | 51.27 | 26.65 |
| TraesCS4A01G099400.1 | Wheat | mitochondrion | 52.12 | 26.39 |
| TraesCS4D01G205800.1 | Wheat | mitochondrion | 51.69 | 26.07 |
| GSMUA_Achr10P... | Banana | mitochondrion | 43.64 | 25.94 |
| TraesCS4B01G204900.1 | Wheat | mitochondrion | 50.85 | 25.86 |
| KRG95812 | Soybean | endoplasmic reticulum | 53.39 | 25.77 |
| KRH67539 | Soybean | mitochondrion | 51.69 | 25.1 |
| GSMUA_Achr7P10440_001 | Banana | cytosol, plastid | 41.53 | 24.75 |
| VIT_00s0250g00050.t01 | Wine grape | plastid | 42.8 | 23.54 |
| HORVU4Hr1G059060.2 | Barley | mitochondrion | 51.69 | 21.18 |
| CDY63834 | Canola | cytosol | 13.14 | 6.54 |
| CDY43044 | Canola | cytosol | 12.71 | 6.28 |
| CDY43831 | Canola | cytosol | 12.71 | 6.22 |
| CDY01499 | Canola | cytosol | 10.59 | 6.14 |
| CDX90439 | Canola | cytosol | 10.59 | 6.1 |
| CDY64205 | Canola | endoplasmic reticulum | 12.71 | 6.09 |
| CDX77687 | Canola | cytosol | 10.17 | 5.97 |
| CDY44506 | Canola | cytosol | 9.32 | 5.56 |
| CDY52243 | Canola | cytosol | 11.02 | 5.52 |
| CDY58500 | Canola | cytosol | 9.32 | 5.49 |
| CDY53619 | Canola | cytosol | 7.63 | 5.34 |
| CDX78809 | Canola | cytosol | 8.47 | 5.12 |
| CDY59045 | Canola | cytosol | 8.47 | 5.09 |
| CDY28774 | Canola | endoplasmic reticulum, plasma membrane | 10.59 | 5.07 |
| CDY08879 | Canola | cytosol | 5.93 | 4.44 |
| CDX95838 | Canola | cytosol | 4.24 | 3.94 |
| CDX92147 | Canola | cytosol | 4.24 | 3.94 |
| CDX86943 | Canola | cytosol | 7.63 | 2.53 |
| CDX78515 | Canola | cytosol | 8.47 | 2.41 |
| CDY09784 | Canola | cytosol | 8.05 | 2.38 |
| CDY30689 | Canola | cytosol | 8.47 | 2.32 |
| CDX69650 | Canola | cytosol | 8.05 | 2.3 |
| CDY00242 | Canola | cytosol | 7.63 | 2.29 |
| CDX97917 | Canola | cytosol | 6.78 | 2.08 |
| CDY54764 | Canola | cytosol | 6.36 | 1.97 |
| CDY19326 | Canola | cytosol | 6.36 | 1.95 |
| CDX86944 | Canola | cytosol | 0.85 | 1.53 |
| CDY40502 | Canola | cytosol | 4.66 | 1.44 |
| CDX70496 | Canola | cytosol | 0.0 | 0.0 |
| Zm00001d032879_P001 | Maize | extracellular | 0.0 | 0.0 |
| CDY71222 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY16083 | EnsemblPlantsGene:GSBRNA2T00090492001 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF35 | ProteinID:CDY16083 | ProteinID:CDY16083.1 |
| SEG:seg | UniParc:UPI0004EEC2DF | UniProt:A0A078FUM7 | MapMan:35.1 | : | : |
Description
BnaC08g40400DBnaC08g40400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUM7]
Coordinates
chrLK032060:-:530547..531844
Molecular Weight (calculated)
25584.8 Da
IEP (calculated)
9.793
GRAVY (calculated)
-0.750
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRNQSASDF RESGGRGAPA KSKSSKDIYS RSQLEASAAN KESFFAKRMA ENESKPEGLP PSQGGKYVGF GSSHGPAPRS NYQGGGGDVF SVMSEGFGRL
101: SLVAASAANV VQTGTMEFTS KVKEGGLDHT VSETVNVVAS KTTEIRQRTW GIMKGVMAIA SQMVEEFTKE EASTWNQQNT NEGNGYYQNK GATTNMASKD
201: PNHEQPTPLS IESKATQDQF FGKCRFSSLH MITLRR
101: SLVAASAANV VQTGTMEFTS KVKEGGLDHT VSETVNVVAS KTTEIRQRTW GIMKGVMAIA SQMVEEFTKE EASTWNQQNT NEGNGYYQNK GATTNMASKD
201: PNHEQPTPLS IESKATQDQF FGKCRFSSLH MITLRR
001: MAAARRLRTL QSQPENKVCV DCSQKNPQWA SISYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSEIQIK KMDAGGNERL NNFLAQYGIS KETDIISKYN
101: SNAASVYRDR IQALAEGRQW RDPPIVKESV GGGLMNKKPP LSQGGGRDSG NGGWDNWDND DSFRSTDMRR NQSAGDFRSS GGRGAPAKSK SSEDIYSRSQ
201: LEASAANKES FFAKRMAENE SKPEGLPPSQ GGKYVGFGSS PGPAPRSNQQ SGGGDVFSVM SEGFGRLSLV AASAANVVQT GTMEFTSKVK EGGLDQTVSE
301: TVNVVASKTT EIGQRTWGIM KGVMAIASQK VEEFTKEEAS TWNQQNKTEG NGYYQNSGIG NKTANSSFGG SQSSSSGHNN SYRNSNSWDD WGEENNSKKE
401: AAPKVSTSND DDDGGWAGWD DNDAKDDDFY YQPASDKKSV GHNGKSDTAW TGGGFL
101: SNAASVYRDR IQALAEGRQW RDPPIVKESV GGGLMNKKPP LSQGGGRDSG NGGWDNWDND DSFRSTDMRR NQSAGDFRSS GGRGAPAKSK SSEDIYSRSQ
201: LEASAANKES FFAKRMAENE SKPEGLPPSQ GGKYVGFGSS PGPAPRSNQQ SGGGDVFSVM SEGFGRLSLV AASAANVVQT GTMEFTSKVK EGGLDQTVSE
301: TVNVVASKTT EIGQRTWGIM KGVMAIASQK VEEFTKEEAS TWNQQNKTEG NGYYQNSGIG NKTANSSFGG SQSSSSGHNN SYRNSNSWDD WGEENNSKKE
401: AAPKVSTSND DDDGGWAGWD DNDAKDDDFY YQPASDKKSV GHNGKSDTAW TGGGFL
Arabidopsis Description
AGD7ADP-ribosylation factor GTPase-activating protein AGD7 [Source:UniProtKB/Swiss-Prot;Acc:O80925]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.