Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01499 | Canola | cytosol | 97.56 | 98.28 |
| CDX78809 | Canola | cytosol | 86.59 | 90.79 |
| CDY44506 | Canola | cytosol | 86.83 | 89.9 |
| AT4G17890.1 | Thale cress | cytosol | 89.27 | 88.62 |
| CDY58500 | Canola | cytosol | 74.39 | 76.06 |
| CDX77687 | Canola | cytosol | 74.39 | 75.87 |
| VIT_02s0012g01330.t01 | Wine grape | cytosol | 70.49 | 71.36 |
| KRH45437 | Soybean | endoplasmic reticulum, mitochondrion | 68.29 | 69.48 |
| KRH75607 | Soybean | cytosol | 67.56 | 68.73 |
| Solyc08g076920.2.1 | Tomato | nucleus | 67.32 | 66.99 |
| PGSC0003DMT400045159 | Potato | cytosol | 66.59 | 66.26 |
| Solyc08g005070.2.1 | Tomato | cytosol | 64.88 | 66.17 |
| PGSC0003DMT400002955 | Potato | cytosol | 65.12 | 65.76 |
| GSMUA_Achr2P18150_001 | Banana | cytosol | 63.9 | 64.85 |
| GSMUA_Achr4P28870_001 | Banana | cytosol | 63.9 | 64.85 |
| GSMUA_Achr11P... | Banana | cytosol | 63.17 | 64.43 |
| GSMUA_Achr4P21720_001 | Banana | cytosol | 63.17 | 63.79 |
| CDY08879 | Canola | cytosol | 48.54 | 63.17 |
| Os10t0574800-01 | Rice | plasma membrane | 62.2 | 62.65 |
| EER91883 | Sorghum | cytosol | 60.98 | 61.43 |
| CDY59045 | Canola | cytosol | 58.78 | 61.32 |
| TraesCS1A01G193000.1 | Wheat | cytosol | 60.49 | 61.23 |
| TraesCS1D01G196700.1 | Wheat | cytosol | 60.24 | 60.99 |
| Zm00001d034885_P002 | Maize | cytosol | 61.22 | 60.34 |
| Zm00001d012827_P002 | Maize | cytosol | 61.22 | 59.62 |
| EER90493 | Sorghum | cytosol | 60.49 | 59.62 |
| Os03t0854100-01 | Rice | cytosol | 59.02 | 58.74 |
| TraesCS4A01G323700.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 57.56 | 57.0 |
| Zm00001d047020_P002 | Maize | cytosol | 60.73 | 56.59 |
| TraesCS5D01G554100.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 57.07 | 56.52 |
| TraesCS1B01G207900.1 | Wheat | mitochondrion, plastid | 60.49 | 52.65 |
| Zm00001d030031_P002 | Maize | plastid | 60.73 | 51.55 |
| TraesCS5B01G554600.1 | Wheat | cytosol, plastid | 57.07 | 50.65 |
| HORVU5Hr1G123590.1 | Barley | cytosol | 57.32 | 48.25 |
| Bra012634.1-P | Field mustard | cytosol | 98.29 | 39.39 |
| CDY71222 | Canola | cytosol | 9.02 | 38.54 |
| HORVU1Hr1G047800.23 | Barley | plastid | 20.49 | 24.85 |
| CDY18435 | Canola | cytosol | 22.44 | 21.8 |
| CDY07784 | Canola | mitochondrion | 22.68 | 21.48 |
| CDX92147 | Canola | cytosol | 13.17 | 21.26 |
| CDX95838 | Canola | cytosol | 13.17 | 21.26 |
| CDY69342 | Canola | mitochondrion | 22.44 | 21.0 |
| CDX74953 | Canola | cytosol | 22.93 | 20.8 |
| CDX79739 | Canola | mitochondrion | 22.93 | 20.75 |
| CDY30849 | Canola | cytosol | 22.44 | 20.54 |
| CDX73533 | Canola | cytosol | 21.95 | 20.18 |
| CDX76193 | Canola | cytosol | 22.2 | 20.18 |
| CDX78196 | Canola | cytosol | 21.71 | 20.0 |
| CDY52243 | Canola | cytosol | 17.8 | 15.5 |
| CDY43044 | Canola | cytosol | 18.05 | 15.48 |
| CDY63834 | Canola | cytosol | 17.8 | 15.4 |
| CDY43831 | Canola | cytosol | 18.05 | 15.35 |
| CDY28774 | Canola | endoplasmic reticulum, plasma membrane | 17.8 | 14.81 |
| CDY64205 | Canola | endoplasmic reticulum | 17.56 | 14.6 |
| CDY16083 | Canola | cytosol | 6.1 | 10.59 |
| CDY23645 | Canola | cytosol | 4.15 | 10.49 |
| CDY53619 | Canola | cytosol | 8.29 | 10.09 |
| CDY26647 | Canola | plastid | 3.9 | 8.84 |
| CDX86943 | Canola | cytosol | 14.39 | 8.29 |
| CDY00242 | Canola | cytosol | 14.63 | 7.62 |
| CDX97917 | Canola | cytosol | 14.15 | 7.54 |
| CDY09784 | Canola | cytosol | 14.63 | 7.52 |
| CDY19326 | Canola | cytosol | 13.9 | 7.41 |
| CDX69650 | Canola | cytosol | 14.88 | 7.38 |
| CDX78515 | Canola | cytosol | 14.63 | 7.22 |
| CDY30689 | Canola | cytosol | 14.63 | 6.96 |
| CDY40502 | Canola | cytosol | 12.93 | 6.95 |
| CDY54764 | Canola | cytosol | 11.95 | 6.43 |
| CDX70496 | Canola | cytosol | 6.83 | 5.06 |
| CDX86944 | Canola | cytosol | 0.98 | 3.05 |
Protein Annotations
| MapMan:22.3.4.2 | Gene3D:3.30.40.160 | GO:A0A078DPQ2 | InterPro:ARFGAP/RecO | InterPro:ArfGAP_dom | InterPro:ArfGAP_dom_sf |
| EnsemblPlants:CDX90439 | ProteinID:CDX90439 | ProteinID:CDX90439.1 | GO:GO:0003674 | GO:GO:0005096 | GO:GO:0008150 |
| GO:GO:0030234 | EnsemblPlantsGene:GSBRNA2T00151049001 | InterPro:IPR001164 | InterPro:IPR038508 | PFAM:PF01412 | PRINTS:PR00405 |
| PFscan:PS50115 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF381 | SMART:SM00105 | SUPFAM:SSF57863 | UniParc:UPI0004EDDDC6 |
| SEG:seg | : | : | : | : | : |
Description
BnaA03g43420D
Coordinates
chrLK031863:-:222960..225465
Molecular Weight (calculated)
43878.8 Da
IEP (calculated)
9.233
GRAVY (calculated)
-0.559
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSDNLTDK TAVFRKLKSK SDNKVCFDCS AKNPTWASVT YGIFLCIDCS ATHRSLGVHI SFVRSTNLDS WSPEQLRTMM FGGNNRAQVF FKQHGWTDGG
101: KIEAKYTSRA ADLYRQLLAK EVAKATAEDA AIALPSSPLA AEGSNGVSSF SVKEELPPKE SFTVKNEATS SPKASNTVVP STFKKPIGAK RTGKTGGLGA
201: RKLTTKSTGN LYEQKPEEVA PVIPAATSTN NGGSKSSGGS SSYASRFEYN DDFQSGGKSI GGTQVLNHVA PPKSSSFFSD FGMDSSFPKK SSSNSSKAQV
301: EESDEARKKF TNAKSISSAQ YFGDQNKNAD LESKATLQKF SGSASISSAD FFGHDQDDSN DDITASDLIN RLSFQAQQDI SSIVNIAGET KKKLGTLASG
401: IFSDLQDRML
101: KIEAKYTSRA ADLYRQLLAK EVAKATAEDA AIALPSSPLA AEGSNGVSSF SVKEELPPKE SFTVKNEATS SPKASNTVVP STFKKPIGAK RTGKTGGLGA
201: RKLTTKSTGN LYEQKPEEVA PVIPAATSTN NGGSKSSGGS SSYASRFEYN DDFQSGGKSI GGTQVLNHVA PPKSSSFFSD FGMDSSFPKK SSSNSSKAQV
301: EESDEARKKF TNAKSISSAQ YFGDQNKNAD LESKATLQKF SGSASISSAD FFGHDQDDSN DDITASDLIN RLSFQAQQDI SSIVNIAGET KKKLGTLASG
401: IFSDLQDRML
001: MASSSADNLT DKNIVFRKLK SKSENKVCFD CSAKNPTWAS VTYGIFLCID CSATHRNLGV HISFVRSTNL DSWSPEQLRT MMFGGNNRAQ VFFKQHGWTD
101: GGKIEAKYTS RAADLYRQIL AKEVAKAIAE ETNSGLLSSP VATSQLPEVS NGVSSYSVKE ELPLSKHEAT SATSSPKASN TVVPSTFKKP IGAKRTGKTG
201: GLGARKLTTK PKDNLYEQKP EEVAPVIPAV SSTNNGESKS SAGSSFASRF EYNDDLQSGG QSVGGTQVLN HVAPPKSSSF FSDFGMDSSF PKKSSSNSSK
301: SQVEESDEAR KKFTNAKSIS SAQYFGDQNK NADLESKATL QKFAGSASIS SADFYGHDQD DSNIDITASD LINRLSFQAQ QDLSSLVNIA GETKKKLGTL
401: ASGIFSDIQD RML
101: GGKIEAKYTS RAADLYRQIL AKEVAKAIAE ETNSGLLSSP VATSQLPEVS NGVSSYSVKE ELPLSKHEAT SATSSPKASN TVVPSTFKKP IGAKRTGKTG
201: GLGARKLTTK PKDNLYEQKP EEVAPVIPAV SSTNNGESKS SAGSSFASRF EYNDDLQSGG QSVGGTQVLN HVAPPKSSSF FSDFGMDSSF PKKSSSNSSK
301: SQVEESDEAR KKFTNAKSIS SAQYFGDQNK NADLESKATL QKFAGSASIS SADFYGHDQD DSNIDITASD LINRLSFQAQ QDLSSLVNIA GETKKKLGTL
401: ASGIFSDIQD RML
Arabidopsis Description
AGD8Probable ADP-ribosylation factor GTPase-activating protein AGD8 [Source:UniProtKB/Swiss-Prot;Acc:Q8H100]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.