Factsheet for HORVU5Hr1G123590.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G323700.1	Wheat	cytosol, nucleus, peroxisome, plastid	82.14	96.62
TraesCS5D01G554100.1	Wheat	cytosol, nucleus, peroxisome, plastid	81.93	96.38
TraesCS5B01G554600.1	Wheat	cytosol, plastid	81.72	86.15
Os03t0854100-01	Rice	cytosol	69.82	82.52
EER90493	Sorghum	cytosol	66.74	78.12
Zm00001d034885_P002	Maize	cytosol	65.91	77.16
Zm00001d012827_P002	Maize	cytosol	66.53	76.96
GSMUA_Achr4P21720_001	Banana	cytosol	54.21	65.02
GSMUA_Achr4P28870_001	Banana	cytosol	53.8	64.85
GSMUA_Achr11P...	Banana	cytosol	53.18	64.43
VIT_02s0012g01330.t01	Wine grape	cytosol	53.39	64.2
GSMUA_Achr2P18150_001	Banana	cytosol	52.77	63.61
KRH75607	Soybean	cytosol	52.57	63.52
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	52.57	63.52
Solyc08g005070.2.1	Tomato	cytosol	52.36	63.43
Solyc08g076920.2.1	Tomato	nucleus	52.36	61.89
PGSC0003DMT400002955	Potato	cytosol	51.54	61.82
PGSC0003DMT400045159	Potato	cytosol	51.54	60.92
Bra024999.1-P	Field mustard	cytosol	44.97	60.0
CDY58500	Canola	cytosol	48.67	59.1
CDX77687	Canola	cytosol	48.46	58.71
AT5G46750.1	Thale cress	cytosol	48.25	58.46
CDY44506	Canola	cytosol	47.23	58.08
AT2G35210.1	Thale cress	cytosol	47.02	57.97
CDY59045	Canola	cytosol	46.61	57.76
Bra013265.1-P	Field mustard	cytosol	46.61	57.61
Bra017330.1-P	Field mustard	cytosol	46.41	57.36
CDX90439	Canola	cytosol	48.25	57.32
CDX78809	Canola	cytosol	45.79	57.03
CDY01499	Canola	cytosol	47.23	56.51
AT4G17890.1	Thale cress	cytosol	47.84	56.42
HORVU1Hr1G047800.23	Barley	plastid	21.77	31.36
Bra012634.1-P	Field mustard	cytosol	48.05	22.87
HORVU4Hr1G059060.2	Barley	mitochondrion	18.69	15.8
HORVU7Hr1G055220.21	Barley	cytosol	13.35	7.82
HORVU5Hr1G077570.15	Barley	cytosol	11.91	6.93
HORVU6Hr1G059210.10	Barley	cytosol, plastid	9.86	6.78

Protein Annotations

MapMan:22.3.4.2	Gene3D:3.30.40.160	UniProt:A0A287T119	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf
GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547
GO:GO:0046872	EnsemblPlantsGene:HORVU5Hr1G123590	EnsemblPlants:HORVU5Hr1G123590.1	InterPro:IPR001164	InterPro:IPR038508	PFAM:PF01412
PRINTS:PR00405	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF381	SMART:SM00105	SUPFAM:SSF57863
UniParc:UPI000B481BAE	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:664427124..664431004

Molecular Weight (calculated)

52912.9 Da

IEP (calculated)

9.234

GRAVY (calculated)

-0.617

Length

487 amino acids

Sequence
(BLAST)

001: PTDRGEEHQP QPLVLVLDWT PPFFTSPSSP GLPLRAGLVV YTQLTRSPPC PPTCLTKPPP LPAPSQISTH RAGAMAFDAF TDKTAVFRRL KAKPENKMCF
101: DCNAKNPTWA SVTYGIFLCL DCSAFHRSLG VHITFVRSTN LDSWTPDQLK MMAFGGNNRA HAFFKQHGWT EGSGKVDSKY TSRAAELYRQ ILQKEVAKSS
201: TVNVLPSSPV AASQPANPSD DFPDFKLADV PEENANGKHE HVVTNPPKEP AQAPKVPTHP TYVSSVKKPL GAKKLGAKTG GLGVKKLTTK SNESLYDQKP
301: EEPKPVLPTM TTTSAAKSGP SSHSRFQYVE NETSTESKTG GGNKTGHVAA PKTSDFFHEY GMDNGFQRKT NAAASKTQIE ETDEARKKFS NAKAISSSQY
401: FGNTDREQKE AQLSLQKFSG SSSISSADLF GRDTNDSDLD ASAADLINRI SFQASQDLSS LKNMAGETGK KLTSFASNFI TDLDRIL

Best Arabidopsis Sequence Match ( AT4G17890.1 )
(BLAST)

001: MASSSADNLT DKNIVFRKLK SKSENKVCFD CSAKNPTWAS VTYGIFLCID CSATHRNLGV HISFVRSTNL DSWSPEQLRT MMFGGNNRAQ VFFKQHGWTD
101: GGKIEAKYTS RAADLYRQIL AKEVAKAIAE ETNSGLLSSP VATSQLPEVS NGVSSYSVKE ELPLSKHEAT SATSSPKASN TVVPSTFKKP IGAKRTGKTG
201: GLGARKLTTK PKDNLYEQKP EEVAPVIPAV SSTNNGESKS SAGSSFASRF EYNDDLQSGG QSVGGTQVLN HVAPPKSSSF FSDFGMDSSF PKKSSSNSSK
301: SQVEESDEAR KKFTNAKSIS SAQYFGDQNK NADLESKATL QKFAGSASIS SADFYGHDQD DSNIDITASD LINRLSFQAQ QDLSSLVNIA GETKKKLGTL
401: ASGIFSDIQD RML

Arabidopsis Description

AGD8Probable ADP-ribosylation factor GTPase-activating protein AGD8 [Source:UniProtKB/Swiss-Prot;Acc:Q8H100]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.