Factsheet for Os03t0854100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90493	Sorghum	cytosol	83.98	83.17
TraesCS4A01G323700.1	Wheat	cytosol, nucleus, peroxisome, plastid	83.5	83.09
TraesCS5D01G554100.1	Wheat	cytosol, nucleus, peroxisome, plastid	83.25	82.85
Zm00001d034885_P002	Maize	cytosol	83.25	82.45
Zm00001d012827_P002	Maize	cytosol	83.25	81.47
TraesCS5B01G554600.1	Wheat	cytosol, plastid	83.01	74.03
HORVU5Hr1G123590.1	Barley	cytosol	82.52	69.82
Os10t0574800-01	Rice	plasma membrane	67.96	68.8
GSMUA_Achr4P21720_001	Banana	cytosol	67.23	68.23
GSMUA_Achr4P28870_001	Banana	cytosol	66.5	67.82
GSMUA_Achr11P...	Banana	cytosol	66.02	67.66
KRH75607	Soybean	cytosol	65.78	67.25
Solyc08g005070.2.1	Tomato	cytosol	65.05	66.67
VIT_02s0012g01330.t01	Wine grape	cytosol	65.53	66.67
GSMUA_Achr2P18150_001	Banana	cytosol	65.05	66.34
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	64.56	66.0
PGSC0003DMT400002955	Potato	cytosol	63.59	64.53
Solyc08g076920.2.1	Tomato	nucleus	62.86	62.86
PGSC0003DMT400045159	Potato	cytosol	62.14	62.14
Bra024999.1-P	Field mustard	cytosol	54.61	61.64
CDY58500	Canola	cytosol	59.95	61.6
CDX77687	Canola	cytosol	59.95	61.44
AT5G46750.1	Thale cress	cytosol	59.47	60.95
CDY44506	Canola	cytosol	57.52	59.85
Bra013265.1-P	Field mustard	cytosol	57.04	59.64
CDX78809	Canola	cytosol	56.55	59.59
AT4G17890.1	Thale cress	cytosol	59.22	59.08
CDX90439	Canola	cytosol	58.74	59.02
CDY01499	Canola	cytosol	58.25	58.97
AT2G35210.1	Thale cress	cytosol	56.31	58.73
CDY59045	Canola	cytosol	55.34	58.02
Bra017330.1-P	Field mustard	cytosol	55.34	57.87
HORVU1Hr1G047800.23	Barley	plastid	23.06	28.11
Bra012634.1-P	Field mustard	cytosol	58.98	23.75
Os03t0278400-01	Rice	plasma membrane	20.87	18.98
Os07t0563800-02	Rice	cytosol	19.42	16.81
Os09t0510700-01	Rice	cytosol	16.26	8.01
Os08t0537600-01	Rice	plasma membrane	15.05	7.46
Os02t0632500-01	Rice	cytosol, plasma membrane	10.68	5.79

Protein Annotations

MapMan:22.3.4.2	Gene3D:3.30.40.160	EntrezGene:4334823	ProteinID:AAO66537.1	ProteinID:ABF99958.1	InterPro:ARFGAP/RecO
InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	ProteinID:BAF13849.1	ProteinID:BAS87421.1	GO:GO:0003674	GO:GO:0005096
GO:GO:0005488	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164
InterPro:IPR038508	EnsemblPlantsGene:Os03g0854100	EnsemblPlants:Os03t0854100-01	PFAM:PF01412	PRINTS:PR00405	PFscan:PS50115
PANTHER:PTHR23180	PANTHER:PTHR23180:SF381	UniProt:Q84T71	SMART:SM00105	SUPFAM:SSF57863	UniParc:UPI0000056183
RefSeq:XP_015630423.1	SEG:seg	:	:	:	:

Description

Similar to ARF GAP-like zinc finger-containing protein ZIGA2 (Fragment). (Os03t0854100-01);Similar to predicted protein. (Os03t0854100-02)

Coordinates

chr3:-:35975476..35978914

Molecular Weight (calculated)

44886.5 Da

IEP (calculated)

9.560

GRAVY (calculated)

-0.674

Length

412 amino acids

Sequence
(BLAST)

001: MAFDAFTDKN AVFRRLKAKP ENKMCFDCSA KNPTWASVTY GIFLCLDCSA VHRSLGVHIT FVRSTNLDSW TPDQLKMMAF GGNNRAHAFF KQHGWTDGGK
101: VDAKYTSRAA ELYRQILQKE VAKSSADNVL PSSPVAASQP QNPSDDFPEF KLPEAPAENT NGKQEPDVTN SQKAPTQTPK APTHPTFATS VKKSIGAKKI
201: GGKTGGLGVK KLTTKPSESL YDQKPEEPKP AAPVMTTSTT KSGPSLHSRF EYVENEPAVD SRNGGTQMTG HVAPPKSSNF FQEYGMDNGF QKKTSTAATK
301: TQIQETDEAR KKFSNAKAIS SSQFFGNQSR EEKDAQMSLQ KFAGSSSISS ADLFGRRDMD DSNLDLSAAD LINRISFQAS QDLSSLKNMA GETGKKLTSI
401: ASNFISDLDR IL

Best Arabidopsis Sequence Match ( AT4G17890.1 )
(BLAST)

001: MASSSADNLT DKNIVFRKLK SKSENKVCFD CSAKNPTWAS VTYGIFLCID CSATHRNLGV HISFVRSTNL DSWSPEQLRT MMFGGNNRAQ VFFKQHGWTD
101: GGKIEAKYTS RAADLYRQIL AKEVAKAIAE ETNSGLLSSP VATSQLPEVS NGVSSYSVKE ELPLSKHEAT SATSSPKASN TVVPSTFKKP IGAKRTGKTG
201: GLGARKLTTK PKDNLYEQKP EEVAPVIPAV SSTNNGESKS SAGSSFASRF EYNDDLQSGG QSVGGTQVLN HVAPPKSSSF FSDFGMDSSF PKKSSSNSSK
301: SQVEESDEAR KKFTNAKSIS SAQYFGDQNK NADLESKATL QKFAGSASIS SADFYGHDQD DSNIDITASD LINRLSFQAQ QDLSSLVNIA GETKKKLGTL
401: ASGIFSDIQD RML

Arabidopsis Description

AGD8Probable ADP-ribosylation factor GTPase-activating protein AGD8 [Source:UniProtKB/Swiss-Prot;Acc:Q8H100]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.