Factsheet for HORVU1Hr1G047800.23

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012827_P002	Maize	cytosol	28.99	23.28
EER90493	Sorghum	cytosol	28.4	23.08
Os03t0854100-01	Rice	cytosol	28.11	23.06
Zm00001d034885_P002	Maize	cytosol	28.11	22.84
GSMUA_Achr11P...	Banana	cytosol	26.63	22.39
Solyc08g076920.2.1	Tomato	nucleus	27.22	22.33
GSMUA_Achr4P28870_001	Banana	cytosol	26.63	22.28
PGSC0003DMT400045159	Potato	cytosol	26.92	22.09
Solyc08g005070.2.1	Tomato	cytosol	26.04	21.89
HORVU5Hr1G123590.1	Barley	cytosol	31.36	21.77
GSMUA_Achr4P21720_001	Banana	cytosol	26.04	21.67
KRH75607	Soybean	cytosol	25.74	21.59
GSMUA_Achr2P18150_001	Banana	cytosol	25.74	21.53
VIT_02s0012g01330.t01	Wine grape	cytosol	25.74	21.48
Bra024999.1-P	Field mustard	cytosol	23.08	21.37
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	25.15	21.09
CDY44506	Canola	cytosol	24.56	20.96
PGSC0003DMT400002955	Potato	cytosol	25.15	20.94
AT4G17890.1	Thale cress	cytosol	25.44	20.82
Bra013265.1-P	Field mustard	cytosol	24.26	20.81
CDX78809	Canola	cytosol	23.96	20.72
AT5G46750.1	Thale cress	cytosol	24.56	20.65
CDY59045	Canola	cytosol	23.96	20.61
AT2G35210.1	Thale cress	cytosol	23.96	20.51
CDX90439	Canola	cytosol	24.85	20.49
CDY01499	Canola	cytosol	24.26	20.15
Bra017330.1-P	Field mustard	cytosol	23.37	20.05
CDY58500	Canola	cytosol	23.67	19.95
CDX77687	Canola	cytosol	23.67	19.9
HORVU4Hr1G059060.2	Barley	mitochondrion	19.23	11.28
Bra012634.1-P	Field mustard	cytosol	25.15	8.31
HORVU7Hr1G055220.21	Barley	cytosol	17.46	7.1
HORVU5Hr1G077570.15	Barley	cytosol	16.27	6.57
HORVU6Hr1G059210.10	Barley	cytosol, plastid	12.43	5.93

Protein Annotations

MapMan:22.3.4.2	Gene3D:3.30.40.160	UniProt:A0A287FFU9	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf
ncoils:Coil	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234
GO:GO:0043547	GO:GO:0046872	EnsemblPlantsGene:HORVU1Hr1G047800	EnsemblPlants:HORVU1Hr1G047800.23	InterPro:IPR001164	InterPro:IPR038508
PFAM:PF01412	PRINTS:PR00405	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF381	SMART:SM00105
SUPFAM:SSF57863	UniParc:UPI000B46AABF	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:353622324..353625149

Molecular Weight (calculated)

38441.1 Da

IEP (calculated)

9.462

GRAVY (calculated)

0.024

Length

338 amino acids

Sequence
(BLAST)

001: STTRPPSSAA SRPNLGKRCV YLFFLLPSHP PSYLPVSSAS QICEPPPQYR SDPYVLWLWK MCFDYNAKNT TWASVTYGIF LCLDCSTFHR SLGVHIAFVR
101: LTNLDSWTPD QLKMMSFGGN NRADAFFKQH GWTEGSGKVD SKEKIMIVPR KKTQRDLRRL EKAEKATQLD KVAIFVVLVL TLRRKPDVLI NLSPKIVGNS
201: KYLGQEKRPI IAWVINQVVM GSTCVLLLAL DAAPRPPIED RKLAVAGAKA YPSPSAFPDE LHLIVHRWNP CFYFCRSQVA YHAKLSLACS LVVCCLICLS
301: LWKKYRSVYI VPCSSIIDEL YSETNMMNCI WRLIFYCI

Best Arabidopsis Sequence Match ( AT4G17890.2 )
(BLAST)

001: MASSSADNLT DKNIVFRKLK SKSENKVCFD CSAKNPTWAS VTYGIFLCID CSATHRNLGV HISFVRSTNL DSWSPEQLRT MMFGGNNRAQ VFFKQHGWTD
101: GGKIEAKYTS RAADLYRQIL AKEVAKAIAE ETNSGLLSSP VATSQLPEVS NGVSSYSVKE ELPLSKHEAT SATSSPKASN TVVPSTFKKP IGAKRTGKTG
201: GLGARKLTTK PKDNLYEQKP EEVAPVIPAV SSTNNGESKS SAGSSFASRF EYNDDLQSGG QSVGGTQVLN HVAPPKSSSF FSDFGMDSSF PKKSSSNSSK
301: SQVEESDEAR KKFTNAKSIS SAQYFGDQNK NADLESKATL QKFAGSASIS SADFYGHDQD DSNIDITASD LINRLSFQVK DPYT

Arabidopsis Description

AGD8Probable ADP-ribosylation factor GTPase-activating protein AGD8 [Source:UniProtKB/Swiss-Prot;Acc:Q8H100]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.