Factsheet for Zm00001d012827_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90493	Sorghum	cytosol	92.87	93.99
Zm00001d034885_P002	Maize	cytosol	91.69	92.79
Os03t0854100-01	Rice	cytosol	81.47	83.25
TraesCS4A01G323700.1	Wheat	cytosol, nucleus, peroxisome, plastid	77.43	78.74
TraesCS5D01G554100.1	Wheat	cytosol, nucleus, peroxisome, plastid	76.96	78.26
TraesCS5B01G554600.1	Wheat	cytosol, plastid	76.96	70.13
GSMUA_Achr4P21720_001	Banana	cytosol	65.8	68.23
Solyc08g005070.2.1	Tomato	cytosol	64.85	67.91
GSMUA_Achr11P...	Banana	cytosol	64.61	67.66
GSMUA_Achr4P28870_001	Banana	cytosol	64.85	67.57
KRH75607	Soybean	cytosol	63.9	66.75
GSMUA_Achr2P18150_001	Banana	cytosol	63.9	66.58
HORVU5Hr1G123590.1	Barley	cytosol	76.96	66.53
PGSC0003DMT400002955	Potato	cytosol	63.9	66.26
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	63.18	66.0
VIT_02s0012g01330.t01	Wine grape	cytosol	63.42	65.93
Solyc08g076920.2.1	Tomato	nucleus	62.95	64.32
PGSC0003DMT400045159	Potato	cytosol	61.52	62.86
AT5G46750.1	Thale cress	cytosol	59.14	61.94
CDX77687	Canola	cytosol	59.14	61.94
CDY44506	Canola	cytosol	58.19	61.87
CDY58500	Canola	cytosol	58.67	61.6
Zm00001d047020_P002	Maize	cytosol	64.37	61.59
Bra024999.1-P	Field mustard	cytosol	53.21	61.37
CDX90439	Canola	cytosol	59.62	61.22
Bra013265.1-P	Field mustard	cytosol	57.24	61.17
CDY01499	Canola	cytosol	58.91	60.93
CDX78809	Canola	cytosol	56.53	60.87
AT4G17890.1	Thale cress	cytosol	59.14	60.29
AT2G35210.1	Thale cress	cytosol	54.87	58.48
CDY59045	Canola	cytosol	53.21	57.0
Bra017330.1-P	Field mustard	cytosol	52.97	56.6
Zm00001d030031_P002	Maize	plastid	64.37	56.11
HORVU1Hr1G047800.23	Barley	plastid	23.28	28.99
Zm00001d009353_P001	Maize	cytosol	7.36	25.62
Bra012634.1-P	Field mustard	cytosol	59.86	24.63
Zm00001d007856_P001	Maize	cytosol	13.54	20.96
Zm00001d015981_P001	Maize	peroxisome	7.13	19.61
Zm00001d004245_P003	Maize	cytosol	8.79	19.27
Zm00001d047793_P001	Maize	extracellular, plasma membrane	20.67	19.21
Zm00001d028656_P001	Maize	mitochondrion	20.19	18.72
Zm00001d006602_P001	Maize	cytosol	20.67	17.54
Zm00001d021802_P001	Maize	cytosol	19.24	16.91
Zm00001d049871_P001	Maize	cytosol	4.75	10.47
Zm00001d015278_P001	Maize	mitochondrion	8.08	10.12
Zm00001d016547_P001	Maize	cytosol, plastid	11.64	9.21
Zm00001d046873_P001	Maize	cytosol, plastid	11.64	9.21
Zm00001d051030_P001	Maize	cytosol, plastid	11.64	9.21
Zm00001d023982_P001	Maize	cytosol	7.84	8.48
Zm00001d051188_P001	Maize	cytosol	2.38	7.58
Zm00001d031667_P006	Maize	cytosol	14.49	7.41
Zm00001d049872_P001	Maize	cytosol	9.26	7.1
Zm00001d021087_P003	Maize	cytosol	14.01	7.05
Zm00001d051187_P009	Maize	plastid	9.5	5.67
Zm00001d032879_P001	Maize	extracellular	1.19	2.3
Zm00001d016932_P001	Maize	endoplasmic reticulum	0.95	2.19
Zm00001d031462_P001	Maize	endoplasmic reticulum, extracellular	0.95	2.09

Protein Annotations

EntrezGene:100216842	MapMan:22.3.4.2	Gene3D:3.30.40.160	ProteinID:AQK61537.1	ProteinID:AQK61542.1	InterPro:ARFGAP/RecO
InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	UniProt:B4FK00	EMBL:BT037438	GO:GO:0003674	GO:GO:0005096
GO:GO:0005488	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164
InterPro:IPR038508	PFAM:PF01412	PRINTS:PR00405	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF381
SMART:SM00105	SUPFAM:SSF57863	UniParc:UPI00017B6EA7	EnsemblPlantsGene:Zm00001d012827	EnsemblPlants:Zm00001d012827_P002	EnsemblPlants:Zm00001d012827_T002
SEG:seg	:	:	:	:	:

Description

ADP-ribosylation factor GTPase-activating protein AGD10

Coordinates

chr5:+:939545..943194

Molecular Weight (calculated)

45306.0 Da

IEP (calculated)

9.828

GRAVY (calculated)

-0.588

Length

421 amino acids

Sequence
(BLAST)

001: MAAAAAAAAF DAYTDKNAIF RRLKAKPENK MCFDCNAKNP TWASVTYGIF LCLDCSAVHR SLGVHITFVR STNLDSWTPD QLKMMAFGGN NRAHAFFKQH
101: GWTDGGKVEA KYTSRAAELY RQMLNKEVAK SAITDNALPS SPVTASEASK PSDDFPEFKL SDAPAPPAEN LNGKHEPKSP KAAPRSPKAA THPTFATSVK
201: KPIGAKKVGG KTGGLGVRKL TTKPNESLYE QKPEEPKPAI PALTAPTAKG GPSLHSRFEY VDNEQSSVSR TGGSGSRVTG HVAPPKSSDF FQEYGMGNGF
301: QKKSSNASKA QIEETDEARK KFSNAKAISS SQFFGTQNRE EKEAQLSLQK FAGSSSISSS DLFGRTNVDD SNLDLSAADL INRISFQASQ DLSSLKDIAG
401: ETGKKLTSFA SNFISDLDRI L

Best Arabidopsis Sequence Match ( AT5G46750.1 )
(BLAST)

001: MATENLTDKN VVFRKLKSKS ENKVCFDCSA KNPTWASVPY GIFLCIDCSA VHRSLGVHIS FVRSTNLDSW SPEQLRTMMF GGNNRAQVFF KQHGWNDGGK
101: IEAKYTSRAA DMYRQTLAKE VAKAMAEETV LPSLSSVATS QPVESSENGF TSESPKESSL KQEAAVVSSP KASQKVVAST FKKPLVSRKS GKTGGLGARK
201: LTTKSKDNLY EQKPEEPVPV IPAASPTNDT SAAGSSFASR FEYFDDEQSG GQSGTRVLSH VAPPKSSNFF NEFGMDSAFP KKSSSSSSKA QVEETDEARK
301: KFSNAKSISS AQFFGNQNRD ADLDSKATLQ KFSGSAAISS SDLFGHGPDD SNIDITASDL INRISFQAQQ DMSSIANLAE ETKNKLGTFA SSIFSDLQDR
401: ML

Arabidopsis Description

AGD9AGD9 [Source:UniProtKB/TrEMBL;Acc:A0A178UAW4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.