Factsheet for Bra024999.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58500	Canola	cytosol	98.9	90.02
CDX77687	Canola	cytosol	96.99	88.06
AT5G46750.1	Thale cress	cytosol	85.21	77.36
Bra013265.1-P	Field mustard	cytosol	76.16	70.56
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	67.12	60.79
KRH75607	Soybean	cytosol	66.58	60.3
VIT_02s0012g01330.t01	Wine grape	cytosol	66.03	59.51
Solyc08g005070.2.1	Tomato	cytosol	64.66	58.71
Solyc08g076920.2.1	Tomato	nucleus	66.03	58.5
PGSC0003DMT400002955	Potato	cytosol	64.93	58.37
PGSC0003DMT400045159	Potato	cytosol	65.48	58.01
GSMUA_Achr4P28870_001	Banana	cytosol	62.47	56.44
Bra017330.1-P	Field mustard	cytosol	60.27	55.84
Os10t0574800-01	Rice	plasma membrane	62.19	55.77
GSMUA_Achr2P18150_001	Banana	cytosol	61.64	55.69
GSMUA_Achr4P21720_001	Banana	cytosol	61.92	55.66
EER91883	Sorghum	cytosol	61.64	55.28
GSMUA_Achr11P...	Banana	cytosol	60.82	55.22
Os03t0854100-01	Rice	cytosol	61.64	54.61
TraesCS1A01G193000.1	Wheat	cytosol	60.55	54.57
TraesCS1D01G196700.1	Wheat	cytosol	60.0	54.07
Zm00001d034885_P002	Maize	cytosol	61.1	53.61
EER90493	Sorghum	cytosol	60.82	53.37
Zm00001d012827_P002	Maize	cytosol	61.37	53.21
TraesCS4A01G323700.1	Wheat	cytosol, nucleus, peroxisome, plastid	59.18	52.17
TraesCS5D01G554100.1	Wheat	cytosol, nucleus, peroxisome, plastid	59.18	52.17
Zm00001d047020_P002	Maize	cytosol	61.1	50.68
TraesCS5B01G554600.1	Wheat	cytosol, plastid	59.45	46.97
TraesCS1B01G207900.1	Wheat	mitochondrion, plastid	60.55	46.92
Zm00001d030031_P002	Maize	plastid	61.1	46.17
HORVU5Hr1G123590.1	Barley	cytosol	60.0	44.97
Bra012634.1-P	Field mustard	cytosol	76.16	27.18
HORVU1Hr1G047800.23	Barley	plastid	21.37	23.08
Bra017179.1-P	Field mustard	cytosol	23.01	19.05
Bra005187.1-P	Field mustard	cytosol	22.19	18.37
Bra021263.1-P	Field mustard	cytosol	13.42	17.88
Bra000005.1-P	Field mustard	mitochondrion	23.29	17.82
Bra039812.1-P	Field mustard	cytosol	21.92	17.74
Bra007020.1-P	Field mustard	cytosol	21.64	17.4
Bra029030.1-P	Field mustard	cytosol	20.55	15.69
Bra022711.1-P	Field mustard	cytosol	19.73	15.25
Bra002995.1-P	Field mustard	cytosol	18.63	14.35
Bra019896.1-P	Field mustard	cytosol	16.99	8.05
Bra006193.1-P	Field mustard	cytosol	16.99	7.63
Bra008838.1-P	Field mustard	cytosol	16.71	7.38
Bra010046.1-P	Field mustard	cytosol	15.89	7.33
Bra029295.1-P	Field mustard	cytosol	16.16	6.84
Bra027124.1-P	Field mustard	cytosol	14.25	6.83
Bra026910.1-P	Field mustard	plastid	3.01	6.08

Protein Annotations

MapMan:22.3.4.2	Gene3D:3.30.40.160	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	EnsemblPlantsGene:Bra024999
EnsemblPlants:Bra024999.1	EnsemblPlants:Bra024999.1-P	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150
GO:GO:0009719	GO:GO:0009737	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164
InterPro:IPR038508	UniProt:M4E893	PFAM:PF01412	PRINTS:PR00405	PFscan:PS50115	PANTHER:PTHR23180
PANTHER:PTHR23180:SF381	SMART:SM00105	SUPFAM:SSF57863	UniParc:UPI000253FB6E	SEG:seg	:

Description

AT5G46750 (E=2e-098) AGD9 | AGD9 (ARF-GAP DOMAIN 9); ARF GTPase activator/ DNA binding / zinc ion binding

Coordinates

chrA06:+:24613070..24614872

Molecular Weight (calculated)

39195.5 Da

IEP (calculated)

8.304

GRAVY (calculated)

-0.520

Length

365 amino acids

Sequence
(BLAST)

001: MATENHADKN VVFRKLKAKS ENKVCFDCSA KNPTWASVTY GVFLCIDCSA VHRNLGVHIS FVRSTNLDSW SPEQLRTMMF GGNNRAQVFF KQHGWNDGGR
101: IDAKYTSRAA DLYKQTLAKE VAKAMAEEEA PLPSSVVATS QPVESSEPPA KETSAAVAVS SSPKASQGAV ASTFKKPLGA RKTGKTGGLG ARKLTTKPKE
201: NLYDQKPEEP VPVIPAASST KITSSSSSAA GSSFASRFEY FDEEQQSGGQ SGTRVEETDE ARKKFSNAKS ISSAQFYGNQ NRDADLESKA TLQKFSGSAA
301: ISSADLFGHG QDDSNIDITA SDLINRISFQ AQQDVSSLVN IAEETTKKLG SLASGIFGDL QDRML

Best Arabidopsis Sequence Match ( AT5G46750.1 )
(BLAST)

001: MATENLTDKN VVFRKLKSKS ENKVCFDCSA KNPTWASVPY GIFLCIDCSA VHRSLGVHIS FVRSTNLDSW SPEQLRTMMF GGNNRAQVFF KQHGWNDGGK
101: IEAKYTSRAA DMYRQTLAKE VAKAMAEETV LPSLSSVATS QPVESSENGF TSESPKESSL KQEAAVVSSP KASQKVVAST FKKPLVSRKS GKTGGLGARK
201: LTTKSKDNLY EQKPEEPVPV IPAASPTNDT SAAGSSFASR FEYFDDEQSG GQSGTRVLSH VAPPKSSNFF NEFGMDSAFP KKSSSSSSKA QVEETDEARK
301: KFSNAKSISS AQFFGNQNRD ADLDSKATLQ KFSGSAAISS SDLFGHGPDD SNIDITASDL INRISFQAQQ DMSSIANLAE ETKNKLGTFA SSIFSDLQDR
401: ML

Arabidopsis Description

AGD9AGD9 [Source:UniProtKB/TrEMBL;Acc:A0A178UAW4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.