Factsheet for Bra027124.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54764	Canola	cytosol	100.0	99.87
AT1G60860.1	Thale cress	cytosol	87.39	85.7
Bra019896.1-P	Field mustard	cytosol	78.71	77.79
KRH29237	Soybean	cytosol	62.81	61.6
KRH24228	Soybean	cytosol	62.29	61.08
Solyc04g008660.2.1	Tomato	cytosol	57.95	56.47
GSMUA_Achr1P01960_001	Banana	cytosol	56.24	54.66
Zm00001d051188_P001	Maize	cytosol	9.33	53.79
TraesCS6A01G221400.1	Wheat	cytosol	53.88	53.74
TraesCS6D01G213800.1	Wheat	cytosol	53.75	53.6
TraesCS6B01G259800.1	Wheat	cytosol	53.88	53.45
Os02t0632500-01	Rice	cytosol, plasma membrane	52.69	52.76
OQU85359	Sorghum	cytosol, mitochondrion, plastid	54.14	49.11
HORVU6Hr1G059210.10	Barley	cytosol, plastid	45.07	48.45
VIT_01s0010g01480.t01	Wine grape	endoplasmic reticulum, extracellular	44.02	46.79
Zm00001d051187_P009	Maize	plastid	42.31	45.67
PGSC0003DMT400076862	Potato	cytosol	7.49	44.19
PGSC0003DMT400008126	Potato	cytosol	11.43	40.65
Bra008838.1-P	Field mustard	cytosol	43.63	40.19
Bra006193.1-P	Field mustard	cytosol	42.05	39.36
PGSC0003DMT400013119	Potato	cytosol	10.25	37.5
Bra010046.1-P	Field mustard	cytosol	38.9	37.42
Bra029295.1-P	Field mustard	cytosol	41.26	36.43
Bra021263.1-P	Field mustard	cytosol	6.57	18.25
Bra024999.1-P	Field mustard	cytosol	6.83	14.25
Bra029030.1-P	Field mustard	cytosol	8.67	13.81
Bra002995.1-P	Field mustard	cytosol	8.54	13.71
Bra022711.1-P	Field mustard	cytosol	8.41	13.56
Bra013265.1-P	Field mustard	cytosol	6.7	12.94
Bra005187.1-P	Field mustard	cytosol	6.96	12.02
Bra017179.1-P	Field mustard	cytosol	6.83	11.79
Bra039812.1-P	Field mustard	cytosol	6.96	11.75
Bra000005.1-P	Field mustard	mitochondrion	7.1	11.32
Bra007020.1-P	Field mustard	cytosol	6.57	11.01
Bra017330.1-P	Field mustard	cytosol	5.65	10.91
Bra026910.1-P	Field mustard	plastid	1.45	6.08
Bra012634.1-P	Field mustard	cytosol	6.57	4.89

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:1.25.40.20	Gene3D:2.30.29.30	MapMan:22.3.4.1	Gene3D:3.30.40.160	InterPro:AGD1/2/3/4_BAR_plant
InterPro:AH/BAR_dom_sf	InterPro:ARFGAP/RecO	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	InterPro:BAR_dom	EnsemblPlantsGene:Bra027124	EnsemblPlants:Bra027124.1	EnsemblPlants:Bra027124.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872
InterPro:IPR001164	InterPro:IPR001849	InterPro:IPR002110	InterPro:IPR004148	InterPro:IPR011993	InterPro:IPR020683
InterPro:IPR027267	InterPro:IPR036770	InterPro:IPR038508	UniProt:M4EEB2	PFAM:PF00169	PFAM:PF01412
PFAM:PF12796	PFAM:PF16746	InterPro:PH-like_dom_sf	InterPro:PH_domain	PRINTS:PR00405	PFscan:PS50003
PFscan:PS50088	PFscan:PS50115	PFscan:PS50297	PFscan:PS51021	PANTHER:PTHR23180	PANTHER:PTHR23180:SF244
SMART:SM00105	SMART:SM00233	SMART:SM00248	SMART:SM00721	SUPFAM:SSF103657	SUPFAM:SSF48403
SUPFAM:SSF50729	SUPFAM:SSF57863	UniParc:UPI00025426BE	:	:	:

Description

AT1G60860 (E=0.0) AGD2 | AGD2 (ARF-GAP DOMAIN 2); ARF GTPase activator/ protein binding / zinc ion binding

Coordinates

chrA09:+:8652264..8657529

Molecular Weight (calculated)

86065.8 Da

IEP (calculated)

6.574

GRAVY (calculated)

-0.471

Length

761 amino acids

Sequence
(BLAST)

001: MAAFINLEDS PMFQKQVFSL EGTTDELKDR CQKLYKGVKK FMGVLGDAST GVSAFADSLE EFGAGHDDPV SVSIGGPVIS KFVNTLRELS SYKEFLRSQV
101: EHVLLERLTN FMTVDLQEAK ESRRRFDKAV HSYDQAREKF VSLKKNTRGE IVAELEEDLE NSKSAFEKSR FNLVNSLMTI EAKKKYQFLE SISAIMDSHL
201: RYFKLGYDLL SQLEPYIHHV LTDAQQSKEQ SKIEQDRFEK RIQEFRTQSE LDSQQVEPSN VDGNHVYRTL PYKNVEATSI ATADKEVIKQ GYLLKRSASL
301: RADWKRRFFV LDNHGSLYYY RNTGNKSAGS QHYYSGLGEH RSGVFRRFRS RHIRSASQGS LDCNLIDLRT SLIKLDAEDT DLRLCFRIIS PQMTYTLQAE
401: NGADRMDWVN KITAAIATRL NSHFLQQSPI NYASSGPAGD ELTLDQKQDY NQRVNMGDDV FTTLRGIPGN DECAECNAPD PDWASLNLGV LMCIECSGVH
501: RNLGVHISKI LLNHKHFESF DTVRFSAGNA YCNGVWEGLL QLDHDCEKGS TNKLALVTKP SSKDSFALKE KYIHVKYLEK ALVIKDERET NLTASSKIWE
601: AVQSKNIREI YRLIVTADAN IINTKFDDIT AIDAYHHLAD AEDEVKKRHD PNACQRIKDS NDSRNCLQGC SLLHVACQSG DPVLLELLLQ FGADINMRDY
701: HGRTPLHHCI ASGNNAFAKV LLRRGARPSI EDGGGLSVLE RAMEMGAIAD EELFLLLAEC H

Best Arabidopsis Sequence Match ( AT1G60860.1 )
(BLAST)

001: MAGFINLEDS PMFQKQVFSL EGTSDELKDR CQKLYKGVKK FMGALGEAST GVSAFADSLE EFGAGHDDPV SVSIGGPVIS KFINTLRELS SYKEFLRSQV
101: EHVLLERLTN FMTVDLQEAK ESRRRFDKAV HSYDQAREKF VSLKKNTRGD IVAELEEDLE NSKSAFEKSR FNLVNSLMTI EAKKKYEFLE SISAIMDSHF
201: KYFKLGYDLL SQLEPYIHQV LTYAQQSKEQ SKIEQDRFAQ RIQEFRTQSE LDSQQASAKA DPSDVGGNHV YRAIPRKNVE ANSVSTADKE VTKQGYLLKR
301: SASLRADWKR RFFVLDNHGS LYYYRNTGNK SAKSQHYYSG LGEHSSGVFG RFRTRHNRSA SQGSLDCNMI DLRTSLIKLD AEDTDLRLCF RIISPQKTYT
401: LQAENGADRM DWVNKITAAI TIRLNSHFLQ QSPARYLDKK NTSSGPATEN LTLNQKEDYN QRLNVGDDVL TILREIPGNN TCAECNAPDP DWASLNLGVL
501: MCIECSGVHR NLGVHISKVR SLTLDVKVWE PTILDLFRNL GNGYCNSVWE ELLHHLDDDS EKGSTDTLAS VSKPSSEDWF TLKEKYINGK YLEKALVVKD
601: EREANSTASS RIWEAVQSRN IRDIYRLIVK ADANIINTKF DDITDLDVYH HHHVDAPDEV KKRHDPNACQ RIKNSNEARN CLQGCSLLHV ACQSGDPILL
701: ELLLQFGADI NMRDYHGRTP LHHCIASGNN AFAKVLLRRG ARPSIEDGGG LSVLERAMEM GAITDEELFL LLAECQ

Arabidopsis Description

AGD2ADP-ribosylation factor GTPase-activating protein AGD2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6C3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.