Factsheet for Zm00001d051188_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049871_P001	Maize	cytosol	35.61	24.61
Os02t0632500-01	Rice	cytosol, plasma membrane	81.82	14.21
GSMUA_Achr1P01960_001	Banana	cytosol	59.85	10.09
Bra027124.1-P	Field mustard	cytosol	53.79	9.33
CDY54764	Canola	cytosol	53.79	9.32
CDY40502	Canola	cytosol	53.79	9.31
AT1G60860.1	Thale cress	cytosol	54.55	9.28
CDY19326	Canola	cytosol	53.03	9.1
Bra019896.1-P	Field mustard	cytosol	53.03	9.09
CDX97917	Canola	cytosol	52.27	8.97
AT1G10870.2	Thale cress	cytosol	51.52	8.72
Solyc04g008660.2.1	Tomato	cytosol	51.52	8.71
KRH29237	Soybean	cytosol	50.76	8.63
KRH24228	Soybean	cytosol	49.24	8.38
Zm00001d031667_P006	Maize	cytosol	36.36	5.83
Zm00001d021087_P003	Maize	cytosol	34.85	5.5
Zm00001d021802_P001	Maize	cytosol	15.91	4.38
Zm00001d006602_P001	Maize	cytosol	15.91	4.23
PGSC0003DMT400076862	Potato	cytosol	3.79	3.88
PGSC0003DMT400013119	Potato	cytosol	6.06	3.85
Zm00001d034885_P002	Maize	cytosol	8.33	2.64
Zm00001d007856_P001	Maize	cytosol	5.3	2.57
Zm00001d047020_P002	Maize	cytosol	8.33	2.5
Zm00001d012827_P002	Maize	cytosol	7.58	2.38
Zm00001d030031_P002	Maize	plastid	8.33	2.28
Zm00001d047793_P001	Maize	extracellular, plasma membrane	6.82	1.99
Zm00001d051187_P009	Maize	plastid	9.09	1.7
Zm00001d016547_P001	Maize	cytosol, plastid	6.82	1.69
Zm00001d051030_P001	Maize	cytosol, plastid	6.82	1.69
Zm00001d046873_P001	Maize	cytosol, plastid	6.82	1.69
Zm00001d004245_P003	Maize	cytosol	2.27	1.56
Zm00001d028656_P001	Maize	mitochondrion	5.3	1.54
Zm00001d016932_P001	Maize	endoplasmic reticulum	1.52	1.09
Zm00001d031462_P001	Maize	endoplasmic reticulum, extracellular	1.52	1.05
PGSC0003DMT400008126	Potato	cytosol	1.52	0.93
Zm00001d015278_P001	Maize	mitochondrion	0.76	0.3
Zm00001d032879_P001	Maize	extracellular	0.0	0.0
Zm00001d009353_P001	Maize	cytosol	0.0	0.0
VIT_01s0010g01480.t01	Wine grape	endoplasmic reticulum, extracellular	0.0	0.0
Zm00001d023982_P001	Maize	cytosol	0.0	0.0
Zm00001d049872_P001	Maize	cytosol	0.0	0.0
Zm00001d015981_P001	Maize	peroxisome	0.0	0.0

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	UniProt:A0A1D6Q5I7	ProteinID:AQK53795.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	PFAM:PF13857	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR23180	PANTHER:PTHR23180:SF244
SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI0008447D83	EnsemblPlantsGene:Zm00001d051188	EnsemblPlants:Zm00001d051188_P001	EnsemblPlants:Zm00001d051188_T001

Description

ADP-ribosylation factor GTPase-activating protein AGD1

Coordinates

chr4:+:147841756..147843477

Molecular Weight (calculated)

14853.1 Da

IEP (calculated)

6.136

GRAVY (calculated)

-0.125

Length

132 amino acids

Sequence
(BLAST)

001: MTYDALSKDV HHVQPVTDKM LLDPISCEII QDSGKPEGCL QGCSLLHFAC EYGYPIMVEL LLLFGADINM QDFHGRTPLH HCVQKKNDEL TKHLLKRGAR
101: TTIKDGGGLT ALERRMELGA ITDEDLFILF VR

Best Arabidopsis Sequence Match ( AT1G60860.1 )
(BLAST)

001: MAGFINLEDS PMFQKQVFSL EGTSDELKDR CQKLYKGVKK FMGALGEAST GVSAFADSLE EFGAGHDDPV SVSIGGPVIS KFINTLRELS SYKEFLRSQV
101: EHVLLERLTN FMTVDLQEAK ESRRRFDKAV HSYDQAREKF VSLKKNTRGD IVAELEEDLE NSKSAFEKSR FNLVNSLMTI EAKKKYEFLE SISAIMDSHF
201: KYFKLGYDLL SQLEPYIHQV LTYAQQSKEQ SKIEQDRFAQ RIQEFRTQSE LDSQQASAKA DPSDVGGNHV YRAIPRKNVE ANSVSTADKE VTKQGYLLKR
301: SASLRADWKR RFFVLDNHGS LYYYRNTGNK SAKSQHYYSG LGEHSSGVFG RFRTRHNRSA SQGSLDCNMI DLRTSLIKLD AEDTDLRLCF RIISPQKTYT
401: LQAENGADRM DWVNKITAAI TIRLNSHFLQ QSPARYLDKK NTSSGPATEN LTLNQKEDYN QRLNVGDDVL TILREIPGNN TCAECNAPDP DWASLNLGVL
501: MCIECSGVHR NLGVHISKVR SLTLDVKVWE PTILDLFRNL GNGYCNSVWE ELLHHLDDDS EKGSTDTLAS VSKPSSEDWF TLKEKYINGK YLEKALVVKD
601: EREANSTASS RIWEAVQSRN IRDIYRLIVK ADANIINTKF DDITDLDVYH HHHVDAPDEV KKRHDPNACQ RIKNSNEARN CLQGCSLLHV ACQSGDPILL
701: ELLLQFGADI NMRDYHGRTP LHHCIASGNN AFAKVLLRRG ARPSIEDGGG LSVLERAMEM GAITDEELFL LLAECQ

Arabidopsis Description

AGD2ADP-ribosylation factor GTPase-activating protein AGD2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6C3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.