Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 2
- extracellular 3
- golgi 3
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400076862 | Potato | cytosol | 9.36 | 51.94 |
| KRH24228 | Soybean | cytosol | 52.93 | 48.84 |
| KRH29237 | Soybean | cytosol | 52.51 | 48.45 |
| HORVU6Hr1G059210.10 | Barley | cytosol, plastid | 47.07 | 47.6 |
| Zm00001d051187_P009 | Maize | plastid | 46.79 | 47.52 |
| CDX97917 | Canola | cytosol | 49.86 | 46.42 |
| AT1G10870.2 | Thale cress | cytosol | 50.56 | 46.41 |
| Bra019896.1-P | Field mustard | cytosol | 49.86 | 46.36 |
| Solyc04g008660.2.1 | Tomato | cytosol | 50.42 | 46.22 |
| CDY19326 | Canola | cytosol | 49.58 | 46.16 |
| AT1G60860.1 | Thale cress | cytosol | 49.44 | 45.62 |
| CDY40502 | Canola | cytosol | 48.04 | 45.09 |
| GSMUA_Achr1P01960_001 | Banana | cytosol | 48.6 | 44.44 |
| Os02t0632500-01 | Rice | cytosol, plasma membrane | 46.93 | 44.21 |
| Bra027124.1-P | Field mustard | cytosol | 46.79 | 44.02 |
| CDY54764 | Canola | cytosol | 46.79 | 43.96 |
| TraesCS6B01G259800.1 | Wheat | cytosol | 46.79 | 43.68 |
| TraesCS6D01G213800.1 | Wheat | cytosol | 46.23 | 43.38 |
| TraesCS6A01G221400.1 | Wheat | cytosol | 46.09 | 43.25 |
| PGSC0003DMT400008126 | Potato | cytosol | 12.71 | 42.52 |
| OQU85359 | Sorghum | cytosol, mitochondrion, plastid | 48.18 | 41.12 |
| PGSC0003DMT400013119 | Potato | cytosol | 10.89 | 37.5 |
| VIT_01s0150g00030.t01 | Wine grape | cytosol | 42.74 | 36.78 |
| VIT_17s0000g00310.t01 | Wine grape | cytosol | 39.8 | 34.46 |
| VIT_17s0053g00430.t01 | Wine grape | cytosol | 6.56 | 18.22 |
| VIT_19s0014g03510.t01 | Wine grape | cytosol | 6.42 | 9.62 |
| VIT_00s0404g00040.t01 | Wine grape | cytosol | 6.42 | 9.07 |
| VIT_02s0012g01330.t01 | Wine grape | cytosol | 5.03 | 8.89 |
| VIT_08s0007g00010.t01 | Wine grape | mitochondrion | 5.17 | 7.96 |
| VIT_00s0250g00050.t01 | Wine grape | plastid | 4.75 | 7.93 |
| Zm00001d051188_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
Description
No Description!
Coordinates
chr1:-:17612921..17705405
Molecular Weight (calculated)
81673.6 Da
IEP (calculated)
8.313
GRAVY (calculated)
-0.390
Length
716 amino acids
Sequence
(BLAST)
(BLAST)
001: MYLLISGIKL VCTLSFTFEG NSESATHRHT KERTMAANFI RLDDSPMFMK QSPCDSHWDV VIRILRYIKS TPDQGVLYEN RGHIQVVGYT DADWAGSPTD
101: RRSTSGYCVF IGGNLISWKS KKQDVVARSS AEAEYRAMTL ATCELIWLKH LLRELRFGKD EQMKLICDNQ TALHIASNPV FHERTKHIEV DCHFIREKIA
201: SRCVAISFVN SNDQLADIFT KSLRGPVLSK FITAFRELAT YKELLRSQVE HVLLDRLMHF ITVDLHDAKE SRKRFDKAIH AYDQSREKFV SLKKGTREDI
301: VAELEEDLQN SKSSFERSRF NLVNSLVKIE AKKKYEFLES FSAIMDAHLR YFKLGYDLLS QLEPFIHQVL TYAQQSKELA NIEQDKLAKR IQAFRTQTEL
401: ESLKASTNME ASRHASGIHA VGMSSYKNIE AIMQSTTKGE VQTIKQGYLL KRSSSLRGDW KRRFFVLDSQ GTLYYYRNKG TKSMGSQPNY SAGSMEHNSS
501: MFSRFRSKHN KASLLNEENL GCHTVDLRTS TIKIDAEDSD LRLCFRIISP AKTYTLQAEN GADRMDWINK ITGVIASLLN SHILQQPHPG TKLLDNNDSA
601: ISAYDVRSLN GLPEDDLKVN QADNVSKVLR EIPGNDLCAE CSAPEPDWAS LNLGILLCIE CSGVHRNLGV HVSKVRSITL DVKVWEPPIL DLFRTLGNTY
701: CNSIWEELLL LQKERY
101: RRSTSGYCVF IGGNLISWKS KKQDVVARSS AEAEYRAMTL ATCELIWLKH LLRELRFGKD EQMKLICDNQ TALHIASNPV FHERTKHIEV DCHFIREKIA
201: SRCVAISFVN SNDQLADIFT KSLRGPVLSK FITAFRELAT YKELLRSQVE HVLLDRLMHF ITVDLHDAKE SRKRFDKAIH AYDQSREKFV SLKKGTREDI
301: VAELEEDLQN SKSSFERSRF NLVNSLVKIE AKKKYEFLES FSAIMDAHLR YFKLGYDLLS QLEPFIHQVL TYAQQSKELA NIEQDKLAKR IQAFRTQTEL
401: ESLKASTNME ASRHASGIHA VGMSSYKNIE AIMQSTTKGE VQTIKQGYLL KRSSSLRGDW KRRFFVLDSQ GTLYYYRNKG TKSMGSQPNY SAGSMEHNSS
501: MFSRFRSKHN KASLLNEENL GCHTVDLRTS TIKIDAEDSD LRLCFRIISP AKTYTLQAEN GADRMDWINK ITGVIASLLN SHILQQPHPG TKLLDNNDSA
601: ISAYDVRSLN GLPEDDLKVN QADNVSKVLR EIPGNDLCAE CSAPEPDWAS LNLGILLCIE CSGVHRNLGV HVSKVRSITL DVKVWEPPIL DLFRTLGNTY
701: CNSIWEELLL LQKERY
001: MATFINLEDS PMFQKQVCSL EGTADELKDR CQKLYKGVKK FMGTLGEASK GESAFAACLE EFGGGPDDPI SLSIGGPVIS KFINALRELA SYKEFLCSQV
101: EHVLLERLMN FISVDLQEAK ESRHRFDKAA HSYDQSREKF VSLKKNTRGE IVAELEEDLE NSKSTFEKSR FNLVNSLMTI EAKKKYEFLE SISAIMDAHL
201: RYFKLGYDLL NQLEPFIHQI LTYAQQSKEQ SKIEQDRLAR RIQEFRTQSE LDSQQLVANA ESSGANGNRV GGNIPYKNTE TSLTADKEVI KQGYLLKRSS
301: SLRTDWKRKF FVLDSHGSMY YYRTNGNKSM GSHHHYSGSS DHNTGVFGRF RARHNRSGSL TEGSLGYNTI DLRTSLIKLD AEDMDLRLCF RIISPQKTYT
401: LQAENGADRM DWVNKITKAI GTLLNSHFLQ QSPVRYLDKD NSSSAPANAV VSGDQIRHND SRQNIGDDVS TILRGLPGNN ACAECNAPEP DWASLNLGVL
501: LCIQCSGVHR NLGVHISKVR SLSLDVKVWE PTILDLFRNL GNVYCNSLWE GLLHLDDDCE DGSALSHASV SKPCPEDSFS VKEKYILGKY LEKALVIKDE
601: SEANLSAASR IWEAVQSRNI REIYRLIVTT GDVNIINTKF DDITDIDAYH HIDAAEKAVK KRHDPTVCQR IKESNEPRSC LQGCSLLHVA CHIGDSVLLE
701: LLLQFGADLN IRDYHGRTPL HHCISSGNHK FAKILLRRGA RPSIEDDGGL SVLERAMEMG AITDEELFLL LAECA
101: EHVLLERLMN FISVDLQEAK ESRHRFDKAA HSYDQSREKF VSLKKNTRGE IVAELEEDLE NSKSTFEKSR FNLVNSLMTI EAKKKYEFLE SISAIMDAHL
201: RYFKLGYDLL NQLEPFIHQI LTYAQQSKEQ SKIEQDRLAR RIQEFRTQSE LDSQQLVANA ESSGANGNRV GGNIPYKNTE TSLTADKEVI KQGYLLKRSS
301: SLRTDWKRKF FVLDSHGSMY YYRTNGNKSM GSHHHYSGSS DHNTGVFGRF RARHNRSGSL TEGSLGYNTI DLRTSLIKLD AEDMDLRLCF RIISPQKTYT
401: LQAENGADRM DWVNKITKAI GTLLNSHFLQ QSPVRYLDKD NSSSAPANAV VSGDQIRHND SRQNIGDDVS TILRGLPGNN ACAECNAPEP DWASLNLGVL
501: LCIQCSGVHR NLGVHISKVR SLSLDVKVWE PTILDLFRNL GNVYCNSLWE GLLHLDDDCE DGSALSHASV SKPCPEDSFS VKEKYILGKY LEKALVIKDE
601: SEANLSAASR IWEAVQSRNI REIYRLIVTT GDVNIINTKF DDITDIDAYH HIDAAEKAVK KRHDPTVCQR IKESNEPRSC LQGCSLLHVA CHIGDSVLLE
701: LLLQFGADLN IRDYHGRTPL HHCISSGNHK FAKILLRRGA RPSIEDDGGL SVLERAMEMG AITDEELFLL LAECA
Arabidopsis Description
AGD4ARF-GAP domain 4 [Source:TAIR;Acc:AT1G10870]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.