Factsheet for AT1G60860.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40502	Canola	cytosol	86.6	88.07
Bra027124.1-P	Field mustard	cytosol	85.7	87.39
CDY54764	Canola	cytosol	85.7	87.27
AT1G10870.2	Thale cress	cytosol	79.9	79.49
KRH29237	Soybean	cytosol	63.92	63.92
KRH24228	Soybean	cytosol	63.27	63.27
Solyc04g008660.2.1	Tomato	cytosol	59.28	58.9
GSMUA_Achr1P01960_001	Banana	cytosol	57.47	56.96
PGSC0003DMT400076862	Potato	cytosol	9.28	55.81
TraesCS6A01G221400.1	Wheat	cytosol	53.87	54.78
Os02t0632500-01	Rice	cytosol, plasma membrane	53.61	54.74
TraesCS6D01G213800.1	Wheat	cytosol	53.74	54.65
Zm00001d051188_P001	Maize	cytosol	9.28	54.55
TraesCS6B01G259800.1	Wheat	cytosol	53.87	54.5
OQU85359	Sorghum	cytosol, mitochondrion, plastid	54.64	50.54
HORVU6Hr1G059210.10	Barley	cytosol, plastid	45.36	49.72
PGSC0003DMT400008126	Potato	cytosol	13.66	49.53
VIT_01s0010g01480.t01	Wine grape	endoplasmic reticulum, extracellular	45.62	49.44
Zm00001d051187_P009	Maize	plastid	43.3	47.66
PGSC0003DMT400013119	Potato	cytosol	11.98	44.71
AT5G13300.1	Thale cress	cytosol	45.23	42.44
AT5G61980.1	Thale cress	cytosol	42.4	39.73
AT3G17660.2	Thale cress	nucleus	7.47	23.58
AT5G54310.1	Thale cress	cytosol	9.54	15.32
AT5G46750.1	Thale cress	cytosol	7.73	14.93
AT4G17890.1	Thale cress	cytosol	7.6	14.29
AT2G35210.1	Thale cress	cytosol	6.7	13.16
AT2G37550.1	Thale cress	mitochondrion	7.47	12.72
AT3G53710.2	Thale cress	cytosol	7.22	12.2

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:1.25.40.20	Gene3D:2.30.29.30	MapMan:22.3.4.1	Gene3D:3.30.40.160	EntrezGene:842378
ProteinID:AAG51644.1	ProteinID:AAG51867.1	ProteinID:AEE33741.1	InterPro:AGD1/2/3/4_BAR_plant	Symbol:AGD2	InterPro:AH/BAR_dom_sf
EMBL:AK118751	ProteinID:ANM59899.1	ProteinID:ANM59900.1	InterPro:ARFGAP/RecO	ArrayExpress:AT1G60860	EnsemblPlantsGene:AT1G60860
RefSeq:AT1G60860	TAIR:AT1G60860	RefSeq:AT1G60860-TAIR-G	EnsemblPlants:AT1G60860.1	TAIR:AT1G60860.1	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	InterPro:BAR_dom	GO:GO:0003674
GO:GO:0005096	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164
InterPro:IPR001849	InterPro:IPR002110	InterPro:IPR004148	InterPro:IPR011993	InterPro:IPR020683	InterPro:IPR027267
InterPro:IPR036770	InterPro:IPR038508	RefSeq:NP_001322221.1	RefSeq:NP_001322222.1	RefSeq:NP_176283.1	PFAM:PF00169
PFAM:PF01412	PFAM:PF12796	PFAM:PF16746	InterPro:PH-like_dom_sf	InterPro:PH_domain	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009001	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	PRINTS:PR00405	PFscan:PS50003	PFscan:PS50088	PFscan:PS50115	PFscan:PS50297
PANTHER:PTHR23180	PANTHER:PTHR23180:SF244	UniProt:Q9C6C3	SMART:SM00105	SMART:SM00233	SMART:SM00248
SMART:SM00721	SUPFAM:SSF103657	SUPFAM:SSF48403	SUPFAM:SSF50729	SUPFAM:SSF57863	UniParc:UPI00000A3C5B

Description

AGD2ADP-ribosylation factor GTPase-activating protein AGD2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6C3]

Coordinates

chr1:-:22400857..22407824

Molecular Weight (calculated)

87807.6 Da

IEP (calculated)

6.649

GRAVY (calculated)

-0.533

Length

776 amino acids

Sequence
(BLAST)

001: MAGFINLEDS PMFQKQVFSL EGTSDELKDR CQKLYKGVKK FMGALGEAST GVSAFADSLE EFGAGHDDPV SVSIGGPVIS KFINTLRELS SYKEFLRSQV
101: EHVLLERLTN FMTVDLQEAK ESRRRFDKAV HSYDQAREKF VSLKKNTRGD IVAELEEDLE NSKSAFEKSR FNLVNSLMTI EAKKKYEFLE SISAIMDSHF
201: KYFKLGYDLL SQLEPYIHQV LTYAQQSKEQ SKIEQDRFAQ RIQEFRTQSE LDSQQASAKA DPSDVGGNHV YRAIPRKNVE ANSVSTADKE VTKQGYLLKR
301: SASLRADWKR RFFVLDNHGS LYYYRNTGNK SAKSQHYYSG LGEHSSGVFG RFRTRHNRSA SQGSLDCNMI DLRTSLIKLD AEDTDLRLCF RIISPQKTYT
401: LQAENGADRM DWVNKITAAI TIRLNSHFLQ QSPARYLDKK NTSSGPATEN LTLNQKEDYN QRLNVGDDVL TILREIPGNN TCAECNAPDP DWASLNLGVL
501: MCIECSGVHR NLGVHISKVR SLTLDVKVWE PTILDLFRNL GNGYCNSVWE ELLHHLDDDS EKGSTDTLAS VSKPSSEDWF TLKEKYINGK YLEKALVVKD
601: EREANSTASS RIWEAVQSRN IRDIYRLIVK ADANIINTKF DDITDLDVYH HHHVDAPDEV KKRHDPNACQ RIKNSNEARN CLQGCSLLHV ACQSGDPILL
701: ELLLQFGADI NMRDYHGRTP LHHCIASGNN AFAKVLLRRG ARPSIEDGGG LSVLERAMEM GAITDEELFL LLAECQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.