Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- endoplasmic reticulum 1
- golgi 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95838 | Canola | cytosol | 82.11 | 79.53 |
| CDX92147 | Canola | cytosol | 82.11 | 79.53 |
| Bra021263.1-P | Field mustard | cytosol | 70.33 | 63.14 |
| KRH15700 | Soybean | cytosol | 40.65 | 51.55 |
| PGSC0003DMT400026308 | Potato | cytosol, endoplasmic reticulum, nucleus | 40.65 | 42.55 |
| VIT_17s0053g00430.t01 | Wine grape | cytosol | 43.09 | 41.09 |
| KRH09434 | Soybean | cytosol | 40.65 | 40.98 |
| KRH38902 | Soybean | cytosol | 39.84 | 40.33 |
| Solyc03g098500.2.1 | Tomato | nucleus | 39.84 | 39.52 |
| KRH41906 | Soybean | cytosol | 40.24 | 33.11 |
| AT5G54310.1 | Thale cress | cytosol | 43.9 | 22.36 |
| AT2G35210.1 | Thale cress | cytosol | 21.95 | 13.67 |
| AT5G46750.1 | Thale cress | cytosol | 21.14 | 12.94 |
| AT3G53710.2 | Thale cress | cytosol | 23.58 | 12.64 |
| AT2G37550.1 | Thale cress | mitochondrion | 23.17 | 12.5 |
| AT4G17890.1 | Thale cress | cytosol | 20.73 | 12.35 |
| AT1G10870.2 | Thale cress | cytosol | 23.98 | 7.56 |
| AT1G60860.1 | Thale cress | cytosol | 23.58 | 7.47 |
| AT5G61980.1 | Thale cress | cytosol | 24.8 | 7.37 |
| AT5G13300.1 | Thale cress | cytosol | 24.39 | 7.26 |
Protein Annotations
| MapMan:22.3.4.2 | Gene3D:3.30.40.160 | EntrezGene:821033 | UniProt:A0A1I9LR18 | Symbol:AGD15 | ProteinID:ANM65026.1 |
| InterPro:ARFGAP/RecO | ArrayExpress:AT3G17660 | EnsemblPlantsGene:AT3G17660 | RefSeq:AT3G17660 | TAIR:AT3G17660 | RefSeq:AT3G17660-TAIR-G |
| EnsemblPlants:AT3G17660.2 | InterPro:ArfGAP_dom | InterPro:ArfGAP_dom_sf | Unigene:At.38686 | GO:GO:0003674 | GO:GO:0005096 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043547 | GO:GO:0046872 | InterPro:IPR001164 |
| InterPro:IPR038508 | RefSeq:NP_001327025.1 | PFAM:PF01412 | PRINTS:PR00405 | PFscan:PS50115 | PANTHER:PTHR23180 |
| PANTHER:PTHR23180:SF160 | SMART:SM00105 | SUPFAM:SSF57863 | UniParc:UPI000848EAEE | : | : |
Description
AGD15ARF-GAP domain 15 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR18]
Coordinates
chr3:+:6037598..6039319
Molecular Weight (calculated)
27875.4 Da
IEP (calculated)
9.300
GRAVY (calculated)
-0.457
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRKASVSKE LNAKHSKILE ALLKHPDNRE CADCRSKAPR WASVNLGIFI CMQCSGIHRS LGVHISQVRS ITLDTWLPDQ VAFMKSTGNA KGNEYWESEL
101: PQHFERSSSD TFIRAKYSEK RWVSPGAIQP APIVSQLSCK VSHLVESGYK PETPKKARTL SLDEEILLHH VLQVTPPETR TRAGSVDMKE NVYVVPLPEF
201: KKPNQKNENF SSEVNQNRRT TIAPPSSWAT FDCKAMIQAF LFFIFC
101: PQHFERSSSD TFIRAKYSEK RWVSPGAIQP APIVSQLSCK VSHLVESGYK PETPKKARTL SLDEEILLHH VLQVTPPETR TRAGSVDMKE NVYVVPLPEF
201: KKPNQKNENF SSEVNQNRRT TIAPPSSWAT FDCKAMIQAF LFFIFC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.