CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
cytosol 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15700	Soybean	cytosol	72.84	91.24
KRH09434	Soybean	cytosol	91.36	90.98
KRH41906	Soybean	cytosol	74.9	60.87
VIT_17s0053g00430.t01	Wine grape	cytosol	54.32	51.16
PGSC0003DMT400026308	Potato	cytosol, endoplasmic reticulum, nucleus	40.74	42.13
AT3G17660.2	Thale cress	nucleus	40.33	39.84
CDX92147	Canola	cytosol	41.56	39.76
Solyc03g098500.2.1	Tomato	nucleus	40.33	39.52
CDX95838	Canola	cytosol	41.15	39.37
Bra021263.1-P	Field mustard	cytosol	42.39	37.59
KRH27179	Soybean	cytosol	47.33	23.76
KRH22157	Soybean	cytosol	46.91	23.7
KRH26038	Soybean	cytosol	45.68	22.2
KRH55419	Soybean	cytosol	44.86	21.12
KRH30767	Soybean	nucleus	17.7	17.7
KRH75607	Soybean	cytosol	21.81	13.15
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	21.81	13.15
KRH67539	Soybean	mitochondrion	20.16	10.08
KRH32302	Soybean	mitochondrion	19.75	10.02
KRG95812	Soybean	endoplasmic reticulum	20.16	10.02
KRH19707	Soybean	cytosol	19.75	9.98
KRH45201	Soybean	cytosol	27.16	8.02
KRH63858	Soybean	cytosol	25.51	7.9
KRH59741	Soybean	cytosol	25.93	7.88
KRH01512	Soybean	cytosol	27.16	7.87
KRH29237	Soybean	cytosol	23.87	7.47
KRH24228	Soybean	cytosol	23.46	7.35
KRH54108	Soybean	cytosol	19.75	6.5

Protein Annotations

EntrezGene:100802691	MapMan:22.3.4.2	Gene3D:3.30.40.160	EMBL:ACUP02005889	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	EnsemblPlantsGene:GLYMA_09G165700	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150
GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164	InterPro:IPR038508	UniProt:K7LEB1
EnsemblPlants:KRH38902	ProteinID:KRH38902	ProteinID:KRH38902.1	ProteinID:KRH38903.1	PFAM:PF01412	PRINTS:PR00405
PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF160	SMART:SM00105	SUPFAM:SSF57863	UniParc:UPI000294F111

Description

hypothetical protein

Coordinates

chr9:+:38956331..38960159

Molecular Weight (calculated)

27138.2 Da

IEP (calculated)

10.398

GRAVY (calculated)

-0.635

Length

243 amino acids

Sequence
(BLAST)

001: MSGKASVSKE LHAKHTKILE GLVKLPDNRE CADCRTKAPR WASVNLGIFI CMQCSGIHRS LGVHISKVRS TTLDTWLPDQ ISFMQLMGNA KSNKHWEAEL
101: PPNFDRNGYG VEKFIRSKYV EKRWASKGGL QPASKSAEII FNSNKSPASG AKSAIQNRRL SLEESILVKH MAQIRSPITR SHEGSSDLQK KNSPPPIRRP
201: SASFDFDYSR GKNNGTVDHF GLLSIHDSKQ DFSTTPPSWT TFD

Best Arabidopsis Sequence Match ( AT3G17660.1 )
(BLAST)

001: MNRKASVSKE LNAKHSKILE ALLKHPDNRE CADCRSKAPR WASVNLGIFI CMQCSGIHRS LGVHISQVRS ITLDTWLPDQ VAFMKSTGNA KGNEYWESEL
101: PQHFERSSSD TFIRAKYSEK RWVSPGAIQP APIVSQLSCK VSHLVESGYK PETPKKARTL SLDEEILLHH VLQVTPPETR TRAGSVDMKE NVYVVPLPEF
201: KKPNQKNENF SSEVNQNRRT TIAPPSSWAT FD

Arabidopsis Description

AGD15ARF-GAP domain 15 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR18]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.