CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
golgi 2
mitochondrion 4
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19707	Soybean	cytosol	92.69	92.31
KRG95812	Soybean	endoplasmic reticulum	74.74	73.21
KRH67539	Soybean	mitochondrion	73.7	72.63
VIT_08s0007g00010.t01	Wine grape	mitochondrion	65.55	67.53
GSMUA_AchrUn_...	Banana	mitochondrion	57.83	65.33
Solyc09g010520.2.1	Tomato	nucleus	63.47	65.1
PGSC0003DMT400023046	Potato	mitochondrion	63.26	64.88
AT3G53710.2	Thale cress	cytosol	62.0	64.71
AT2G37550.1	Thale cress	mitochondrion	60.54	63.6
Solyc10g084690.1.1	Tomato	mitochondrion	59.71	62.31
PGSC0003DMT400028571	Potato	mitochondrion	59.71	62.31
GSMUA_Achr7P15230_001	Banana	cytosol	55.95	61.33
Os03t0278400-01	Rice	plasma membrane	57.62	60.93
EER92462	Sorghum	mitochondrion	56.58	59.3
Zm00001d047793_P001	Maize	extracellular, plasma membrane	55.74	58.94
GSMUA_Achr9P04020_001	Banana	mitochondrion	59.08	58.84
Zm00001d007856_P001	Maize	cytosol	33.4	58.82
CDY23645	Canola	cytosol	19.83	58.64
Zm00001d028656_P001	Maize	mitochondrion	55.53	58.59
TraesCS4A01G099400.1	Wheat	mitochondrion	55.53	57.08
TraesCS4D01G205800.1	Wheat	mitochondrion	55.53	56.84
GSMUA_Achr5P28610_001	Banana	endoplasmic reticulum, vacuole	53.65	56.48
CDY16083	Canola	cytosol	27.77	56.36
TraesCS4B01G204900.1	Wheat	mitochondrion	54.49	56.25
GSMUA_Achr10P...	Banana	mitochondrion	46.14	55.67
CDY26647	Canola	plastid	20.04	53.04
Bra026910.1-P	Field mustard	plastid	20.04	53.04
GSMUA_Achr7P10440_001	Banana	cytosol, plastid	43.63	52.78
HORVU4Hr1G059060.2	Barley	mitochondrion	55.74	46.35
KRH15700	Soybean	cytosol	9.39	23.2
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	18.58	22.08
KRH75607	Soybean	cytosol	18.58	22.08
KRH38902	Soybean	cytosol	10.02	19.75
KRH09434	Soybean	cytosol	9.81	19.26
KRH26038	Soybean	cytosol	18.37	17.6
KRH22157	Soybean	cytosol	16.7	16.63
KRH55419	Soybean	cytosol	17.33	16.09
KRH41906	Soybean	cytosol	10.02	16.05
KRH27179	Soybean	cytosol	16.08	15.91
KRH30767	Soybean	nucleus	6.26	12.35
KRH63858	Soybean	cytosol	12.94	7.9
KRH45201	Soybean	cytosol	13.57	7.9
KRH29237	Soybean	cytosol	12.73	7.86
KRH01512	Soybean	cytosol	13.57	7.75
KRH59741	Soybean	cytosol	12.73	7.62
KRH24228	Soybean	cytosol	12.11	7.47
KRH54108	Soybean	cytosol	11.06	7.18
Zm00001d032879_P001	Maize	extracellular	0.84	1.84

Protein Annotations

EntrezGene:100792658	MapMan:22.3.4.2	Gene3D:3.30.40.160	EMBL:ACUP02006111	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	EnsemblPlantsGene:GLYMA_10G043600	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150
GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	UniProt:I1L8K7	InterPro:IPR001164	InterPro:IPR038508
ProteinID:KRH32301.1	EnsemblPlants:KRH32302	ProteinID:KRH32302	ProteinID:KRH32302.1	PFAM:PF01412	PRINTS:PR00405
PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF35	SMART:SM00105	SUPFAM:SSF57863	UniParc:UPI000233D549
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:3921005..3926061

Molecular Weight (calculated)

53043.5 Da

IEP (calculated)

7.599

GRAVY (calculated)

-1.067

Length

479 amino acids

Sequence
(BLAST)

001: MAAASRRLRD LQSSAGNKIC VDCSQKNPQW ASVSYGVFMC LECSGKHRGL GVHISFVRSV TMDSWSDIQI KKMEAGGNDK LNAFLAQYSI PKETDIVTKY
101: NTNAASVYRN RIQAIAEGRP WRDPPVVKEN LSAGKGKPPL TQTRRNNDSG WDDWGNEGSP RSKSMSTGDF RTLNGAGGAP ARSRSTEDIY TRSQLEASAA
201: NKEGFFARKM AENESRPEGL PPSQGGKYVG FGSSPTPPPQ RRNDAQNDYF SVVSQGIGKL SFVAASAANV VQVGTKEFTS KVKEGGYDHK VNETVNVVTQ
301: KTSEIGQRTW GIMKGVMAMA SQKIEEYTKD DPNWKNDNWQ RNENDTNGYY QDFNREKKGW NSSTGREQSS SGEYKTESSS SWDDWDHKDS RKEEPAKGST
401: HSSGGQFSTY NSSSWDDWEH KDSRKEEPAK GSAPHNNDDW AGWDNAKDDG FDNIYEGANK KGVGHKGKSD GTWTEEGFL

Best Arabidopsis Sequence Match ( AT2G37550.1 )
(BLAST)

001: MAAARRLRTL QSQPENKVCV DCSQKNPQWA SISYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSEIQIK KMDAGGNERL NNFLAQYGIS KETDIISKYN
101: SNAASVYRDR IQALAEGRQW RDPPIVKESV GGGLMNKKPP LSQGGGRDSG NGGWDNWDND DSFRSTDMRR NQSAGDFRSS GGRGAPAKSK SSEDIYSRSQ
201: LEASAANKES FFAKRMAENE SKPEGLPPSQ GGKYVGFGSS PGPAPRSNQQ SGGGDVFSVM SEGFGRLSLV AASAANVVQT GTMEFTSKVK EGGLDQTVSE
301: TVNVVASKTT EIGQRTWGIM KGVMAIASQK VEEFTKEEAS TWNQQNKTEG NGYYQNSGIG NKTANSSFGG SQSSSSGHNN SYRNSNSWDD WGEENNSKKE
401: AAPKVSTSND DDDGGWAGWD DNDAKDDDFY YQPASDKKSV GHNGKSDTAW TGGGFL

Arabidopsis Description

AGD7ADP-ribosylation factor GTPase-activating protein AGD7 [Source:UniProtKB/Swiss-Prot;Acc:O80925]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.