Factsheet for GSMUA_AchrUn_randomP10270_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
nucleus 2
mitochondrion 5
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P28610_001	Banana	endoplasmic reticulum, vacuole	75.0	69.89
GSMUA_Achr9P04020_001	Banana	mitochondrion	78.77	69.44
GSMUA_Achr7P15230_001	Banana	cytosol	70.99	68.88
PGSC0003DMT400028571	Potato	mitochondrion	63.68	58.82
Solyc10g084690.1.1	Tomato	mitochondrion	63.44	58.61
GSMUA_Achr10P...	Banana	mitochondrion	54.72	58.44
Solyc09g010520.2.1	Tomato	nucleus	64.15	58.24
KRH32302	Soybean	mitochondrion	65.33	57.83
PGSC0003DMT400023046	Potato	mitochondrion	63.68	57.82
KRH19707	Soybean	cytosol	65.57	57.8
AT3G53710.2	Thale cress	cytosol	62.5	57.73
AT2G37550.1	Thale cress	mitochondrion	60.85	56.58
KRG95812	Soybean	endoplasmic reticulum	65.09	56.44
KRH67539	Soybean	mitochondrion	63.44	55.35
GSMUA_Achr7P10440_001	Banana	cytosol, plastid	50.94	54.55
VIT_00s0250g00050.t01	Wine grape	plastid	50.0	49.42
GSMUA_Achr11P...	Banana	cytosol	19.81	20.9
GSMUA_Achr4P28870_001	Banana	cytosol	19.58	20.54
GSMUA_Achr4P21720_001	Banana	cytosol	19.1	19.95
GSMUA_Achr2P18150_001	Banana	cytosol	18.87	19.8
GSMUA_Achr4P23780_001	Banana	cytosol	18.63	16.6
GSMUA_Achr1P08800_001	Banana	cytosol	17.92	15.9
GSMUA_Achr8P07470_001	Banana	cytosol	17.22	15.5
GSMUA_Achr5P26280_001	Banana	cytosol	16.75	15.04
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	15.57	13.87
GSMUA_Achr8P00550_001	Banana	cytosol	13.44	10.12
GSMUA_Achr7P22530_001	Banana	endoplasmic reticulum	13.92	7.97
GSMUA_Achr1P01960_001	Banana	cytosol	14.39	7.79
GSMUA_Achr11P...	Banana	cytosol	14.39	7.48
GSMUA_Achr4P00060_001	Banana	cytosol	14.62	7.41
GSMUA_Achr7P22550_001	Banana	cytosol	1.18	3.94
GSMUA_Achr8P00540_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	1.18	1.95

Protein Annotations

MapMan:22.3.4.2	Gene3D:3.30.40.160	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	GO:GO:0003674
GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872
EnsemblPlantsGene:GSMUA_AchrUn_randomG10270_001	EnsemblPlants:GSMUA_AchrUn_randomP10270_001	EnsemblPlants:GSMUA_AchrUn_randomT10270_001	InterPro:IPR001164	InterPro:IPR038508	UniProt:M0U7Y6
PFAM:PF01412	PRINTS:PR00405	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF35	SMART:SM00105
SUPFAM:SSF57863	UniParc:UPI00029522D6	SEG:seg	:	:	:

Description

ADP-ribosylation factor GTPase-activating protein AGD7 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG10270_001]

Coordinates

chrchrUn_random:+:49813720..49820533

Molecular Weight (calculated)

46767.2 Da

IEP (calculated)

9.700

GRAVY (calculated)

-0.904

Length

424 amino acids

Sequence
(BLAST)

001: MAAAAASRRL RQLQSQPGNK SCVDCAQKNP QWASVSYGVF ICLECSGKHR GLGVHISFVR SVTMDSWSEI QLKKMEAGGN DRLNAFLAGY GVSRETDIVP
101: KYNTRAAAVY RERILALAEG RPWTDPPVVK ETPDAGAKRP PLSSSSDVRR NQWTGDSRDP SAGGAHQPAR NRSTQDIYTR AQLEASAANK ESFFARKMEE
201: NGSRPEGIPP SQGGKYVGFG STPPPPRRNN SQGDVLRDTV SVVSQGLGRL SLVASSAANA VQAGRKELTS KMKESGYDQK VNETMSVVAT KTTEIGHKTW
301: GIMKGVMAMA SQKVEVYTKE GISWNVDDWP RKESEKSSYY QEFGQDKRGW SSRQEDSNKQ YNSISSWDDW DKKERREEPG KGTQRGESWA GWDDVRDDAG
401: HDNLNKGVNQ NGKSGSLWTD GGFR

Best Arabidopsis Sequence Match ( AT2G37550.1 )
(BLAST)

001: MAAARRLRTL QSQPENKVCV DCSQKNPQWA SISYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSEIQIK KMDAGGNERL NNFLAQYGIS KETDIISKYN
101: SNAASVYRDR IQALAEGRQW RDPPIVKESV GGGLMNKKPP LSQGGGRDSG NGGWDNWDND DSFRSTDMRR NQSAGDFRSS GGRGAPAKSK SSEDIYSRSQ
201: LEASAANKES FFAKRMAENE SKPEGLPPSQ GGKYVGFGSS PGPAPRSNQQ SGGGDVFSVM SEGFGRLSLV AASAANVVQT GTMEFTSKVK EGGLDQTVSE
301: TVNVVASKTT EIGQRTWGIM KGVMAIASQK VEEFTKEEAS TWNQQNKTEG NGYYQNSGIG NKTANSSFGG SQSSSSGHNN SYRNSNSWDD WGEENNSKKE
401: AAPKVSTSND DDDGGWAGWD DNDAKDDDFY YQPASDKKSV GHNGKSDTAW TGGGFL

Arabidopsis Description

AGD7ADP-ribosylation factor GTPase-activating protein AGD7 [Source:UniProtKB/Swiss-Prot;Acc:O80925]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.