Factsheet for GSMUA_Achr7P22550_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P00540_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	63.78	31.52
GSMUA_Achr11P...	Banana	cytosol	84.25	13.11
GSMUA_Achr4P00060_001	Banana	cytosol	85.83	13.02
GSMUA_Achr1P01960_001	Banana	cytosol	56.69	9.2
PGSC0003DMT400037441	Potato	cytosol	10.24	3.8
GSMUA_Achr7P22530_001	Banana	endoplasmic reticulum	18.9	3.24
GSMUA_Achr8P00550_001	Banana	cytosol	13.39	3.02
GSMUA_Achr5P28610_001	Banana	endoplasmic reticulum, vacuole	8.66	2.42
GSMUA_Achr8P07470_001	Banana	cytosol	7.87	2.12
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	7.87	2.1
GSMUA_Achr4P23780_001	Banana	cytosol	7.87	2.1
GSMUA_Achr5P26280_001	Banana	cytosol	7.09	1.91
GSMUA_Achr1P08800_001	Banana	cytosol	6.3	1.67
GSMUA_Achr7P10440_001	Banana	cytosol, plastid	4.72	1.52
GSMUA_Achr4P28870_001	Banana	cytosol	4.72	1.49
GSMUA_Achr4P21720_001	Banana	cytosol	4.72	1.48
GSMUA_Achr10P...	Banana	mitochondrion	3.94	1.26
GSMUA_Achr11P...	Banana	cytosol	3.94	1.24
GSMUA_Achr2P18150_001	Banana	cytosol	3.94	1.24
GSMUA_AchrUn_...	Banana	mitochondrion	3.94	1.18
GSMUA_Achr7P15230_001	Banana	cytosol	3.94	1.14
PGSC0003DMT400037443	Potato	cytosol	1.57	0.98
GSMUA_Achr9P04020_001	Banana	mitochondrion	3.15	0.83

Protein Annotations

EnsemblPlants:GSMUA_Achr7P22550_001	EnsemblPlants:GSMUA_Achr7T22550_001	EnsemblPlantsGene:GSMUA_Achr7G22550_001	Gene3D:1.20.1270.60	InterPro:AH/BAR_dom_sf	InterPro:IPR027267
PANTHER:PTHR23180	PANTHER:PTHR23180:SF374	PFAM:PF16746	SEG:seg	SUPFAM:SSF103657	UniParc:UPI0002960F32
UniProt:M0TJU1	MapMan:35.1	:	:	:	:

Description

ADP-ribosylation factor GTPase-activating protein AGD3 [Source:GMGC_GENE;Acc:GSMUA_Achr7G22550_001]

Coordinates

chr7:-:25023449..25029861

Molecular Weight (calculated)

14311.4 Da

IEP (calculated)

6.502

GRAVY (calculated)

0.045

Length

127 amino acids

Sequence
(BLAST)

001: MYFTKLDDSP MFRKQIQSLE ESAESLRERC LKFYKGCHKY TEGLGEGYDR DVAFASSLEM FGGGHSDPIS VAFGGPVMTK FTIALREIGT YTEVLRSQVR
101: SIKLLADQYA QCLLTLLLIV CSSMLFI

Best Arabidopsis Sequence Match ( AT5G13300.1 )
(BLAST)

001: MHFTKLDDSP MFRKQLQSME ESAEILRERS LKFYKGCRKY TEGLGEAYDG DIAFASALET FGGGHNDPIS VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HILNDRLLQF ANMDLHEVKE ARKRFDKASL TYDQAREKFL SLRKGTKSDV AAALEQELHT SRSMFEQARF NLVTALSNVE AKKRFEFLEA VSGTMDAHLR
201: YFKQGYELLH QMEPYINQVL TYAQQSRERS NYEQAALNEK MQEYKRQVDR ESRWGSNGSN GSPNGDGIQA IGRSSHKMID AVMQSAARGK VQTIRQGYLS
301: KRSSNLRGDW KRRFFVLDSR GMLYYYRKQC SKPSGSGSQL SGQRNSSELG SGLLSRWLSS NNHGHGGVHD EKSVARHTVN LLTSTIKVDA DQSDLRFCFR
401: IISPTKNYTL QAESALDQMD WIEKITGVIA SLLSSQVPEQ RLPGSPMGSG HHRSASESSS YESSEYDHPT TEEFVCERSF LGYNERPSRS FQPQRSIRKG
501: EKPIDALRKV CGNDKCADCG APEPDWASLN LGVLVCIECS GVHRNLGVHI SKVRSLTLDV KVWEPSVISL FQALGNTFAN TVWEELLHSR SAIHFDPGLT
601: VSDKSRVMVT GKPSYADMIS IKEKYIQAKY AEKLFVRRSR DSDFPQSAAQ QMWDAVSGND KKAVYRLIVN GDADVNYVYD QTSSSSLTLS RVILVPERPK
701: REDVLLRLRN ELLDRTGSSS NISPEGSGGS SLLHCACEKA DLGMVELLLQ YGANVNASDS SGQTPLHCCL LRGKVTIARL LLTRGADPEA MNREGKTALD
801: IAAESNFTDP EVLALLSDTN GYNHRQC

Arabidopsis Description

AGD3ADP-ribosylation factor GTPase-activating protein AGD3 [Source:UniProtKB/Swiss-Prot;Acc:Q5W7F2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.