Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400068809 | Potato | plastid | 26.02 | 41.2 |
| PGSC0003DMT400036762 | Potato | cytosol | 67.54 | 39.55 |
| PGSC0003DMT400076862 | Potato | cytosol | 10.82 | 28.68 |
| PGSC0003DMT400005756 | Potato | cytosol | 64.33 | 26.93 |
| PGSC0003DMT400013119 | Potato | cytosol | 11.4 | 18.75 |
| PGSC0003DMT400008126 | Potato | cytosol | 11.7 | 18.69 |
| PGSC0003DMT400026308 | Potato | cytosol, endoplasmic reticulum, nucleus | 9.06 | 13.19 |
| GSMUA_Achr7P22550_001 | Banana | cytosol | 3.8 | 10.24 |
| PGSC0003DMT400064425 | Potato | cytosol | 9.65 | 7.01 |
| PGSC0003DMT400012918 | Potato | cytosol | 9.36 | 6.88 |
| PGSC0003DMT400049649 | Potato | cytosol | 9.36 | 6.74 |
| PGSC0003DMT400002955 | Potato | cytosol | 7.6 | 6.4 |
| PGSC0003DMT400045159 | Potato | cytosol | 7.02 | 5.83 |
| PGSC0003DMT400028571 | Potato | mitochondrion | 7.31 | 5.45 |
| PGSC0003DMT400023046 | Potato | mitochondrion | 7.31 | 5.35 |
| PGSC0003DMT400037443 | Potato | cytosol | 1.17 | 1.96 |
Protein Annotations
| Gene3D:1.20.1270.60 | Gene3D:2.30.29.30 | MapMan:22.3.4.1 | Gene3D:3.30.40.160 | InterPro:AH/BAR_dom_sf | InterPro:ARFGAP/RecO |
| InterPro:ArfGAP_dom | InterPro:ArfGAP_dom_sf | ncoils:Coil | GO:GO:0003674 | GO:GO:0005096 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043547 | GO:GO:0046872 | InterPro:IPR001164 | InterPro:IPR001849 |
| InterPro:IPR011993 | InterPro:IPR027267 | InterPro:IPR038508 | UniProt:M1B5E3 | PFAM:PF00169 | PFAM:PF01412 |
| EnsemblPlantsGene:PGSC0003DMG401014450 | PGSC:PGSC0003DMG401014450 | EnsemblPlants:PGSC0003DMT400037441 | InterPro:PH-like_dom_sf | InterPro:PH_domain | PRINTS:PR00405 |
| PFscan:PS50003 | PFscan:PS50115 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF374 | SMART:SM00105 | SMART:SM00233 |
| SUPFAM:SSF103657 | SUPFAM:SSF50729 | SUPFAM:SSF57863 | UniParc:UPI000296620D | : | : |
Description
ADP-ribosylation factor GTPase-activating protein AGD3 [Source:PGSC_GENE;Acc:PGSC0003DMG401014450]
Coordinates
chr12:-:48805694..48813788
Molecular Weight (calculated)
38627.7 Da
IEP (calculated)
9.663
GRAVY (calculated)
-0.631
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAHLQYFKQ GYELLHQMEP YINQVLAFAR RARESSTHEQ VVLNEKMQEY KKEVDQESRR SLNSPHNSST AEITQHSSRS SQKVIEAVMQ SAAEGKVETI
101: KQGYLSKRSS NLRGDWKRRF FVLDSRGMLY YYRTLRSRSS FQGSSNPLSS HYHGGVHDEK PVARRTVNLL TSTIKADAEQ SDLRFCFRII SPTKSYTLQA
201: ESTAEQLVWI EKITGVITSL LSSQIPERHF SMSHSTKSRS IGSPMSQDQR TIEECSSGRD FIAKSSIRQS KSASHLPSMK VEKPTDALKR IPGNDKCADC
301: GAPDPDWASL NLGILICIEC SGIHRKFGVH ISKASQLSSL YN
101: KQGYLSKRSS NLRGDWKRRF FVLDSRGMLY YYRTLRSRSS FQGSSNPLSS HYHGGVHDEK PVARRTVNLL TSTIKADAEQ SDLRFCFRII SPTKSYTLQA
201: ESTAEQLVWI EKITGVITSL LSSQIPERHF SMSHSTKSRS IGSPMSQDQR TIEECSSGRD FIAKSSIRQS KSASHLPSMK VEKPTDALKR IPGNDKCADC
301: GAPDPDWASL NLGILICIEC SGIHRKFGVH ISKASQLSSL YN
001: MHFTKLDDSP MFRKQLQSME ESAEILRERS LKFYKGCRKY TEGLGEAYDG DIAFASALET FGGGHNDPIS VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HILNDRLLQF ANMDLHEVKE ARKRFDKASL TYDQAREKFL SLRKGTKSDV AAALEQELHT SRSMFEQARF NLVTALSNVE AKKRFEFLEA VSGTMDAHLR
201: YFKQGYELLH QMEPYINQVL TYAQQSRERS NYEQAALNEK MQEYKRQVDR ESRWGSNGSN GSPNGDGIQA IGRSSHKMID AVMQSAARGK VQTIRQGYLS
301: KRSSNLRGDW KRRFFVLDSR GMLYYYRKQC SKPSGSGSQL SGQRNSSELG SGLLSRWLSS NNHGHGGVHD EKSVARHTVN LLTSTIKVDA DQSDLRFCFR
401: IISPTKNYTL QAESALDQMD WIEKITGVIA SLLSSQVPEQ RLPGSPMGSG HHRSASESSS YESSEYDHPT TEEFVCERSF LGYNERPSRS FQPQRSIRKG
501: EKPIDALRKV CGNDKCADCG APEPDWASLN LGVLVCIECS GVHRNLGVHI SKVRSLTLDV KVWEPSVISL FQALGNTFAN TVWEELLHSR SAIHFDPGLT
601: VSDKSRVMVT GKPSYADMIS IKEKYIQAKY AEKLFVRRSR DSDFPQSAAQ QMWDAVSGND KKAVYRLIVN GDADVNYVYD QTSSSSLTLS RVILVPERPK
701: REDVLLRLRN ELLDRTGSSS NISPEGSGGS SLLHCACEKA DLGMVELLLQ YGANVNASDS SGQTPLHCCL LRGKVTIARL LLTRGADPEA MNREGKTALD
801: IAAESNFTDP EVLALLSDTN GYNHRQC
101: HILNDRLLQF ANMDLHEVKE ARKRFDKASL TYDQAREKFL SLRKGTKSDV AAALEQELHT SRSMFEQARF NLVTALSNVE AKKRFEFLEA VSGTMDAHLR
201: YFKQGYELLH QMEPYINQVL TYAQQSRERS NYEQAALNEK MQEYKRQVDR ESRWGSNGSN GSPNGDGIQA IGRSSHKMID AVMQSAARGK VQTIRQGYLS
301: KRSSNLRGDW KRRFFVLDSR GMLYYYRKQC SKPSGSGSQL SGQRNSSELG SGLLSRWLSS NNHGHGGVHD EKSVARHTVN LLTSTIKVDA DQSDLRFCFR
401: IISPTKNYTL QAESALDQMD WIEKITGVIA SLLSSQVPEQ RLPGSPMGSG HHRSASESSS YESSEYDHPT TEEFVCERSF LGYNERPSRS FQPQRSIRKG
501: EKPIDALRKV CGNDKCADCG APEPDWASLN LGVLVCIECS GVHRNLGVHI SKVRSLTLDV KVWEPSVISL FQALGNTFAN TVWEELLHSR SAIHFDPGLT
601: VSDKSRVMVT GKPSYADMIS IKEKYIQAKY AEKLFVRRSR DSDFPQSAAQ QMWDAVSGND KKAVYRLIVN GDADVNYVYD QTSSSSLTLS RVILVPERPK
701: REDVLLRLRN ELLDRTGSSS NISPEGSGGS SLLHCACEKA DLGMVELLLQ YGANVNASDS SGQTPLHCCL LRGKVTIARL LLTRGADPEA MNREGKTALD
801: IAAESNFTDP EVLALLSDTN GYNHRQC
Arabidopsis Description
AGD3ADP-ribosylation factor GTPase-activating protein AGD3 [Source:UniProtKB/Swiss-Prot;Acc:Q5W7F2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.