Factsheet for PGSC0003DMT400037443

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036762	Potato	cytosol	73.04	25.51
PGSC0003DMT400005756	Potato	cytosol	51.47	12.85
PGSC0003DMT400013119	Potato	cytosol	10.78	10.58
PGSC0003DMT400049649	Potato	cytosol	18.63	8.0
PGSC0003DMT400064425	Potato	cytosol	17.65	7.64
PGSC0003DMT400026308	Potato	cytosol, endoplasmic reticulum, nucleus	8.33	7.23
PGSC0003DMT400008126	Potato	cytosol	7.35	7.01
PGSC0003DMT400028571	Potato	mitochondrion	14.22	6.32
PGSC0003DMT400023046	Potato	mitochondrion	13.73	6.0
PGSC0003DMT400002955	Potato	cytosol	10.78	5.42
PGSC0003DMT400045159	Potato	cytosol	10.78	5.34
PGSC0003DMT400012918	Potato	cytosol	10.29	4.52
PGSC0003DMT400076862	Potato	cytosol	1.47	2.33
GSMUA_Achr7P22550_001	Banana	cytosol	0.98	1.57
PGSC0003DMT400037441	Potato	cytosol	1.96	1.17
PGSC0003DMT400068809	Potato	plastid	0.49	0.46

Protein Annotations

EnsemblPlants:PGSC0003DMT400037443	EnsemblPlantsGene:PGSC0003DMG402014450	Gene3D:1.25.40.20	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
PANTHER:PTHR23180	PANTHER:PTHR23180:SF374	PFAM:PF13637	PFscan:PS50088	PFscan:PS50297	PGSC:PGSC0003DMG402014450
SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI000295F434	UniProt:M1B5E4	MapMan:35.1	:

Description

ADP-ribosylation factor GTPase-activating protein AGD3 [Source:PGSC_GENE;Acc:PGSC0003DMG402014450]

Coordinates

chr12:-:48798810..48804477

Molecular Weight (calculated)

22577.0 Da

IEP (calculated)

7.377

GRAVY (calculated)

-0.268

Length

204 amino acids

Sequence
(BLAST)

001: MRFLESHKHK QFSCKPSEDD HISVKEKFIH GKYAEKKFVH KVEDSRHLLS VAQQLWEGVR KNDKKTVYRL IVVYQADVNA VHGQASLGSD CANSLNPRSG
101: SADLSSDGFF DGCSLLHLAC QTADIGMVEL LLQHGANINA CDLRGQIPLH HSFLRGRTEI AKLLLSRGAD PQAVDKEGKT PFHLVQESAL DDVEIIALLK
201: VAIG

Best Arabidopsis Sequence Match ( AT5G13300.1 )
(BLAST)

001: MHFTKLDDSP MFRKQLQSME ESAEILRERS LKFYKGCRKY TEGLGEAYDG DIAFASALET FGGGHNDPIS VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HILNDRLLQF ANMDLHEVKE ARKRFDKASL TYDQAREKFL SLRKGTKSDV AAALEQELHT SRSMFEQARF NLVTALSNVE AKKRFEFLEA VSGTMDAHLR
201: YFKQGYELLH QMEPYINQVL TYAQQSRERS NYEQAALNEK MQEYKRQVDR ESRWGSNGSN GSPNGDGIQA IGRSSHKMID AVMQSAARGK VQTIRQGYLS
301: KRSSNLRGDW KRRFFVLDSR GMLYYYRKQC SKPSGSGSQL SGQRNSSELG SGLLSRWLSS NNHGHGGVHD EKSVARHTVN LLTSTIKVDA DQSDLRFCFR
401: IISPTKNYTL QAESALDQMD WIEKITGVIA SLLSSQVPEQ RLPGSPMGSG HHRSASESSS YESSEYDHPT TEEFVCERSF LGYNERPSRS FQPQRSIRKG
501: EKPIDALRKV CGNDKCADCG APEPDWASLN LGVLVCIECS GVHRNLGVHI SKVRSLTLDV KVWEPSVISL FQALGNTFAN TVWEELLHSR SAIHFDPGLT
601: VSDKSRVMVT GKPSYADMIS IKEKYIQAKY AEKLFVRRSR DSDFPQSAAQ QMWDAVSGND KKAVYRLIVN GDADVNYVYD QTSSSSLTLS RVILVPERPK
701: REDVLLRLRN ELLDRTGSSS NISPEGSGGS SLLHCACEKA DLGMVELLLQ YGANVNASDS SGQTPLHCCL LRGKVTIARL LLTRGADPEA MNREGKTALD
801: IAAESNFTDP EVLALLSDTN GYNHRQC

Arabidopsis Description

AGD3ADP-ribosylation factor GTPase-activating protein AGD3 [Source:UniProtKB/Swiss-Prot;Acc:Q5W7F2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.