Factsheet for GSMUA_Achr8P00550_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P22530_001	Banana	endoplasmic reticulum	76.02	57.84
GSMUA_Achr11P...	Banana	cytosol	76.02	52.45
GSMUA_Achr4P00060_001	Banana	cytosol	76.73	51.61
GSMUA_Achr1P01960_001	Banana	cytosol	42.27	30.4
GSMUA_Achr8P07470_001	Banana	cytosol	13.68	16.35
GSMUA_Achr5P26280_001	Banana	cytosol	12.79	15.25
GSMUA_Achr4P23780_001	Banana	cytosol	12.79	15.13
GSMUA_Achr10P...	Banana	mitochondrion	9.95	14.11
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	11.9	14.08
GSMUA_Achr1P08800_001	Banana	cytosol	11.9	14.02
GSMUA_Achr7P10440_001	Banana	cytosol, plastid	9.77	13.89
GSMUA_Achr7P15230_001	Banana	cytosol	10.66	13.73
GSMUA_Achr2P18150_001	Banana	cytosol	9.77	13.61
GSMUA_AchrUn_...	Banana	mitochondrion	10.12	13.44
GSMUA_Achr7P22550_001	Banana	cytosol	3.02	13.39
GSMUA_Achr11P...	Banana	cytosol	9.41	13.18
GSMUA_Achr4P28870_001	Banana	cytosol	9.24	12.87
GSMUA_Achr4P21720_001	Banana	cytosol	9.06	12.56
GSMUA_Achr5P28610_001	Banana	endoplasmic reticulum, vacuole	10.12	12.53
GSMUA_Achr9P04020_001	Banana	mitochondrion	10.48	12.27
Zm00001d031462_P001	Maize	endoplasmic reticulum, extracellular	3.02	8.9
Zm00001d016932_P001	Maize	endoplasmic reticulum	2.49	7.65
CDX86944	Canola	cytosol	1.42	6.11
GSMUA_Achr8P00540_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	1.6	3.5

Protein Annotations

Gene3D:1.25.40.20	MapMan:22.3.4.1	Gene3D:3.30.40.160	InterPro:ARFGAP/RecO	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0005096
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872
EnsemblPlantsGene:GSMUA_Achr8G00550_001	EnsemblPlants:GSMUA_Achr8P00550_001	EnsemblPlants:GSMUA_Achr8T00550_001	InterPro:IPR001164	InterPro:IPR001849	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	InterPro:IPR038508	UniProt:M0TLF7	PFAM:PF00169	PFAM:PF01412
PFAM:PF12796	InterPro:PH_domain	PRINTS:PR00405	PFscan:PS50003	PFscan:PS50088	PFscan:PS50115
PFscan:PS50297	PANTHER:PTHR23180	PANTHER:PTHR23180:SF374	SMART:SM00105	SMART:SM00233	SMART:SM00248
SUPFAM:SSF48403	SUPFAM:SSF50729	SUPFAM:SSF57863	UniParc:UPI0002958110	SEG:seg	:

Description

ADP-ribosylation factor GTPase-activating protein AGD3 [Source:GMGC_GENE;Acc:GSMUA_Achr8G00550_001]

Coordinates

chr8:+:484413..493019

Molecular Weight (calculated)

63099.8 Da

IEP (calculated)

6.956

GRAVY (calculated)

-0.540

Length

563 amino acids

Sequence
(BLAST)

001: MQEFKRQIDR ESRWSPNGSK DSANGDGIQA IGRSSHKMIE TVMQSSAKGK VQTIRQGYLS KRSSNLRGDW KRRFFVLDSQ GMLYYYRKQW SRPSGSIHSS
101: EKGHFEHGSG LLSRWFSSHY HGGVHDENSV ARHTVNLLTS TIKIDADQSD LRFCFRIISP SKTYTLQAES AMDQMDWIEK ITGVIASLLS SQSPEQQLLT
201: SPTGRGHHHA ASESSSFSNS SDADHLAIDE LSLEKNFASG NFGRFGRSSQ HHKVNSKQEK PIDVLRKVHG NDVCAECGAP EPDWASLNLG VLLCIECSGV
301: HRNLGVHISK VRSLTLDVRA WEPSVINLFQ SLGNTFANSI WEELLSSISN GKCDDTSSIL LDKNQEHMCI SKPKHSDPIS VKEKFIHAKY AEKDFVCRRE
401: VDQLSVAQHM WESVSANDKK SVYHHIVTSS VDINITYGQT FTNSGDSWHK PYTTSSLSSA STNEDRNELD ECFEGFSLLH LACWTADIGM IELLLQYGAN
501: LNSTDSRRRT PLHQCILKGR HLFAKLLISR GADPHATDED GKSPIQYAIE SGDIDYEDII FLS

Best Arabidopsis Sequence Match ( AT5G13300.1 )
(BLAST)

001: MHFTKLDDSP MFRKQLQSME ESAEILRERS LKFYKGCRKY TEGLGEAYDG DIAFASALET FGGGHNDPIS VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HILNDRLLQF ANMDLHEVKE ARKRFDKASL TYDQAREKFL SLRKGTKSDV AAALEQELHT SRSMFEQARF NLVTALSNVE AKKRFEFLEA VSGTMDAHLR
201: YFKQGYELLH QMEPYINQVL TYAQQSRERS NYEQAALNEK MQEYKRQVDR ESRWGSNGSN GSPNGDGIQA IGRSSHKMID AVMQSAARGK VQTIRQGYLS
301: KRSSNLRGDW KRRFFVLDSR GMLYYYRKQC SKPSGSGSQL SGQRNSSELG SGLLSRWLSS NNHGHGGVHD EKSVARHTVN LLTSTIKVDA DQSDLRFCFR
401: IISPTKNYTL QAESALDQMD WIEKITGVIA SLLSSQVPEQ RLPGSPMGSG HHRSASESSS YESSEYDHPT TEEFVCERSF LGYNERPSRS FQPQRSIRKG
501: EKPIDALRKV CGNDKCADCG APEPDWASLN LGVLVCIECS GVHRNLGVHI SKVRSLTLDV KVWEPSVISL FQALGNTFAN TVWEELLHSR SAIHFDPGLT
601: VSDKSRVMVT GKPSYADMIS IKEKYIQAKY AEKLFVRRSR DSDFPQSAAQ QMWDAVSGND KKAVYRLIVN GDADVNYVYD QTSSSSLTLS RVILVPERPK
701: REDVLLRLRN ELLDRTGSSS NISPEGSGGS SLLHCACEKA DLGMVELLLQ YGANVNASDS SGQTPLHCCL LRGKVTIARL LLTRGADPEA MNREGKTALD
801: IAAESNFTDP EVLALLSDTN GYNHRQC

Arabidopsis Description

AGD3ADP-ribosylation factor GTPase-activating protein AGD3 [Source:UniProtKB/Swiss-Prot;Acc:Q5W7F2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.