Factsheet for GSMUA_Achr7P10440_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
cytosol 3
golgi 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, golgi, nucleus, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	golgi, nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	mitochondrion	68.18	68.01
Zm00001d007856_P001	Maize	cytosol	35.35	51.47
GSMUA_AchrUn_...	Banana	mitochondrion	54.55	50.94
Os03t0278400-01	Rice	plasma membrane	56.31	49.23
Zm00001d047793_P001	Maize	extracellular, plasma membrane	56.06	49.01
GSMUA_Achr7P15230_001	Banana	cytosol	53.54	48.51
Zm00001d028656_P001	Maize	mitochondrion	55.56	48.46
EER92462	Sorghum	mitochondrion	55.3	47.92
TraesCS4A01G099400.1	Wheat	mitochondrion	56.06	47.64
TraesCS4B01G204900.1	Wheat	mitochondrion	55.56	47.41
TraesCS4D01G205800.1	Wheat	mitochondrion	55.56	47.01
GSMUA_Achr5P28610_001	Banana	endoplasmic reticulum, vacuole	53.79	46.81
GSMUA_Achr9P04020_001	Banana	mitochondrion	56.06	46.15
Solyc10g084690.1.1	Tomato	mitochondrion	52.53	45.32
PGSC0003DMT400028571	Potato	mitochondrion	52.27	45.1
AT3G53710.2	Thale cress	cytosol	52.02	44.88
Solyc09g010520.2.1	Tomato	nucleus	52.78	44.75
PGSC0003DMT400023046	Potato	mitochondrion	52.53	44.54
KRH19707	Soybean	cytosol	53.28	43.87
KRH32302	Soybean	mitochondrion	52.78	43.63
KRH67539	Soybean	mitochondrion	52.78	43.0
KRG95812	Soybean	endoplasmic reticulum	53.03	42.94
AT2G37550.1	Thale cress	mitochondrion	49.24	42.76
CDY23645	Canola	cytosol	17.42	42.59
CDY16083	Canola	cytosol	24.75	41.53
Bra026910.1-P	Field mustard	plastid	18.43	40.33
CDY26647	Canola	plastid	18.43	40.33
HORVU4Hr1G059060.2	Barley	mitochondrion	56.06	38.54
GSMUA_Achr11P...	Banana	cytosol	19.44	19.15
GSMUA_Achr2P18150_001	Banana	cytosol	19.44	19.06
GSMUA_Achr4P28870_001	Banana	cytosol	18.94	18.56
GSMUA_Achr4P21720_001	Banana	cytosol	18.43	17.98
GSMUA_Achr4P23780_001	Banana	cytosol	17.68	14.71
GSMUA_Achr1P08800_001	Banana	cytosol	17.17	14.23
GSMUA_Achr8P07470_001	Banana	cytosol	16.67	14.01
GSMUA_Achr5P26280_001	Banana	cytosol	15.66	13.14
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	15.66	13.03
GSMUA_Achr8P00550_001	Banana	cytosol	13.89	9.77
GSMUA_Achr7P22530_001	Banana	endoplasmic reticulum	14.14	7.57
GSMUA_Achr11P...	Banana	cytosol	14.65	7.11
GSMUA_Achr4P00060_001	Banana	cytosol	14.9	7.05
GSMUA_Achr1P01960_001	Banana	cytosol	13.89	7.02
GSMUA_Achr7P22550_001	Banana	cytosol	1.52	4.72
GSMUA_Achr8P00540_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	1.01	1.56
Zm00001d032879_P001	Maize	extracellular	0.76	1.38

Protein Annotations

MapMan:22.3.4.2	Gene3D:3.30.40.160	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	GO:GO:0003674
GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872
EnsemblPlantsGene:GSMUA_Achr7G10440_001	EnsemblPlants:GSMUA_Achr7P10440_001	EnsemblPlants:GSMUA_Achr7T10440_001	InterPro:IPR001164	InterPro:IPR038508	UniProt:M0TGD2
PFAM:PF01412	PRINTS:PR00405	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF35	SMART:SM00105
SUPFAM:SSF57863	UniParc:UPI00029692AD	SEG:seg	:	:	:

Description

Probable ADP-ribosylation factor GTPase-activating protein AGD6 [Source:GMGC_GENE;Acc:GSMUA_Achr7G10440_001]

Coordinates

chr7:+:8442679..8444347

Molecular Weight (calculated)

42756.3 Da

IEP (calculated)

6.986

GRAVY (calculated)

-0.765

Length

396 amino acids

Sequence
(BLAST)

001: MAAAAASTSS SSALRRLQAL QSEPGNGACV DCGQRNPQWA SISYGVFLCL DCSGKHRGLG VHLSFVRSVT MDSWTDAQLR RMECGGNDRL NAFLARRRVP
101: RDADPATKYN SRAAAAYRDC IQALADGRPS QDPPVEDGCD HLAASSNMRR NQSVGDLGCG SGSGSGAATS LRSRSTQDLP AMAQKPANKE RFFARKMYEN
201: STRPEGIPPS QGGKYVGFGS SPTRPARSAS QDDLLSVVSR GFGRLSMAAA SAAQSAASVV QAGTKELTSK VMEVNYDQKV NETVNTVTAR TSEIGHRTWG
301: IMRGVMAMAS LKMEGMGWSE GDDGRYSEAF GQESKGGSGR QTHPSAKDSR GDWNESEMKE EEDHRKHTDG EDSWAWWDEA DDDEQEISHH QPKSAK

Best Arabidopsis Sequence Match ( AT2G37550.1 )
(BLAST)

001: MAAARRLRTL QSQPENKVCV DCSQKNPQWA SISYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSEIQIK KMDAGGNERL NNFLAQYGIS KETDIISKYN
101: SNAASVYRDR IQALAEGRQW RDPPIVKESV GGGLMNKKPP LSQGGGRDSG NGGWDNWDND DSFRSTDMRR NQSAGDFRSS GGRGAPAKSK SSEDIYSRSQ
201: LEASAANKES FFAKRMAENE SKPEGLPPSQ GGKYVGFGSS PGPAPRSNQQ SGGGDVFSVM SEGFGRLSLV AASAANVVQT GTMEFTSKVK EGGLDQTVSE
301: TVNVVASKTT EIGQRTWGIM KGVMAIASQK VEEFTKEEAS TWNQQNKTEG NGYYQNSGIG NKTANSSFGG SQSSSSGHNN SYRNSNSWDD WGEENNSKKE
401: AAPKVSTSND DDDGGWAGWD DNDAKDDDFY YQPASDKKSV GHNGKSDTAW TGGGFL

Arabidopsis Description

AGD7ADP-ribosylation factor GTPase-activating protein AGD7 [Source:UniProtKB/Swiss-Prot;Acc:O80925]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.