Factsheet for HORVU4Hr1G059060.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G099400.1	Wheat	mitochondrion	78.3	96.78
TraesCS4D01G205800.1	Wheat	mitochondrion	77.95	95.94
TraesCS4B01G204900.1	Wheat	mitochondrion	77.08	95.69
Os03t0278400-01	Rice	plasma membrane	67.36	85.65
Zm00001d028656_P001	Maize	mitochondrion	66.32	84.14
EER92462	Sorghum	mitochondrion	66.15	83.37
Zm00001d047793_P001	Maize	extracellular, plasma membrane	64.93	82.56
AT3G53710.2	Thale cress	cytosol	48.26	60.57
GSMUA_Achr10P...	Banana	mitochondrion	41.15	59.7
PGSC0003DMT400023046	Potato	mitochondrion	47.4	58.46
Solyc09g010520.2.1	Tomato	nucleus	47.22	58.24
Solyc10g084690.1.1	Tomato	mitochondrion	46.35	58.17
PGSC0003DMT400028571	Potato	mitochondrion	46.18	57.95
AT2G37550.1	Thale cress	mitochondrion	45.66	57.68
KRH67539	Soybean	mitochondrion	48.61	57.61
KRG95812	Soybean	endoplasmic reticulum	48.26	56.85
KRH19707	Soybean	cytosol	47.22	56.55
GSMUA_Achr7P10440_001	Banana	cytosol, plastid	38.54	56.06
KRH32302	Soybean	mitochondrion	46.35	55.74
CDY16083	Canola	cytosol	21.18	51.69
CDY23645	Canola	cytosol	14.41	51.23
CDY26647	Canola	plastid	15.45	49.17
Bra026910.1-P	Field mustard	plastid	15.45	49.17
VIT_00s0250g00050.t01	Wine grape	plastid	34.9	46.85
HORVU1Hr1G047800.23	Barley	plastid	11.28	19.23
HORVU5Hr1G123590.1	Barley	cytosol	15.8	18.69
HORVU5Hr1G077570.15	Barley	cytosol	11.98	8.24
HORVU7Hr1G055220.21	Barley	cytosol	11.63	8.06
HORVU6Hr1G059210.10	Barley	cytosol, plastid	8.16	6.64

Protein Annotations

MapMan:22.3.4.2	Gene3D:3.30.40.160	UniProt:A0A287P854	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf
GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547
GO:GO:0046872	EnsemblPlantsGene:HORVU4Hr1G059060	EnsemblPlants:HORVU4Hr1G059060.2	InterPro:IPR001164	InterPro:IPR038508	PFAM:PF01412
PRINTS:PR00405	PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF35	SMART:SM00105	SUPFAM:SSF57863
UniParc:UPI000B47177C	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:493802176..493805262

Molecular Weight (calculated)

61482.1 Da

IEP (calculated)

8.799

GRAVY (calculated)

-0.830

Length

576 amino acids

Sequence
(BLAST)

001: RPVPCCCAVG PGCRRRGLFG SAVRPRLPGG VPALPSRRGE ELPACHRRGP GAPRGKGVHR TVFDLPLSLA RSLRVPCRRA LLHHLLPPLV PRPPTEPDPG
101: SGAADPDPAM ASTAARRLRE LQGQPGNKTC VDCAQRNPQW ASVSYGVFMC LECSGKHRGL GVHISFVRSV TMDSWTEPQL RKMEAGGNDR LNAFLAARGV
201: PKETPHIPKY NSNAAAAYRD RIIALAEGRA WTDPPVVKET PGSAAPAPAR RPPLPAGGGS GGGVGGGGGG GWDDWDDEVR PDMRRNQSAG SFAGAGADSG
301: RQPTRSKSTQ DMYTKQELEA SAASKEDFFA RRMAENESKP QGIPPSQGGK YVGFGSTPPP SANRNSNGAA QGDVMQVVSQ GFGRLSLVAA SAAQSAATVV
401: QVGTKEIQSK MREGGYDQKV NETVNVVTNK TAEIGSRTWG IMKGVMALAT QKVEEYAKEG GGGWGDDWQQ REQQNNNNEP YRRYEQETSN GNSNGWNSPQ
501: DGSAKNHNSN SWDDWDDQDK KEEPAKTSQG SDSWAGWDDA KDDGFDSYSH HSPANKSGSN QNGTAGGSYW ADGGFR

Best Arabidopsis Sequence Match ( AT3G53710.1 )
(BLAST)

001: MAATRQLRTL QSQPENKVCV DCAQKNPQWA SVSYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSAIQIK KMEAGGNERL NKFFAQYGIA KETDIISKYN
101: SNAASVYRDR IQALAEGRPW NDPPVVKEAN KKPPLAQGGY GNNNNNNNGG WDSWDNDDSY KSDMRRNQSA NDFRASGNRE GAHVKSKSSE DIYTRSQLEA
201: SAAGKESFFA RRMAENESKP EGLPPSQGGK YVGFGSSSAP PPRNNQQDDV FSVVSQGFGR LSLVAASAAQ SAASVVQTGT KEFTSKVKEG GYDHKVSETV
301: NVVANKTTEI GHRTWGIMKG VMAMATQKVE EFTKEGSTSW NQQSENEGNG YYQNFGNGNK AANSSVGGGR PQSSSTSGHY NNSQNSNSWD SWGENENKKT
401: EAVAPKGSSA SNDDDGWTGW DDHDAKDDGF DGHYQSAGDK KSAGHNGKSD TAWTGGGFL

Arabidopsis Description

AGD6Probable ADP-ribosylation factor GTPase-activating protein AGD6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M354]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.