Factsheet for HORVU5Hr1G077570.15

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G084970.2
HORVU5Hr1G077570.15
HORVU5Hr1G093460.2
HORVU7Hr1G008640.2
HORVU7Hr1G008670.5
HORVU7Hr1G055220.21

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13300.1	HORVU5Hr1G093460.2	AT3G63300.1	19363154
AT5G13300.1	HORVU5Hr1G077570.15	AT5G13300.1	15743878
AT5G13300.1	HORVU7Hr1G055220.21	AT5G13300.1	15743878
AT5G13300.1	HORVU7Hr1G008640.2	AT5G26980.1	15743878
AT5G13300.1	HORVU7Hr1G008670.5	AT5G26980.1	15743878
AT5G13300.1	HORVU1Hr1G084970.2	AT5G42080.1	15923323

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G293000.1	Wheat	cytosol	96.42	97.11
TraesCS5B01G292200.1	Wheat	cytosol	96.65	97.0
TraesCS5D01G300300.2	Wheat	cytosol	97.13	96.79
Os09t0510700-01	Rice	cytosol	88.65	88.76
EER99172	Sorghum	cytosol	86.38	86.48
Zm00001d021087_P003	Maize	cytosol	86.14	86.14
CDX70496	Canola	cytosol	51.85	78.48
GSMUA_Achr11P...	Banana	cytosol	73.95	75.86
HORVU7Hr1G055220.21	Barley	cytosol	73.84	74.37
GSMUA_Achr4P00060_001	Banana	cytosol	73.72	73.72
KRH45201	Soybean	cytosol	70.13	71.32
VIT_01s0150g00030.t01	Wine grape	cytosol	69.65	70.07
CDY09784	Canola	cytosol	66.55	69.8
KRH01512	Soybean	cytosol	69.77	69.61
Bra006193.1-P	Field mustard	cytosol	67.38	69.37
PGSC0003DMT400005756	Potato	cytosol	67.62	69.28
AT5G13300.1	Thale cress	cytosol	68.34	69.17
Solyc05g023750.2.1	Tomato	cytosol	67.14	68.79
CDX69650	Canola	cytosol	67.62	68.52
Bra008838.1-P	Field mustard	cytosol	67.38	68.28
CDX78515	Canola	cytosol	67.62	68.11
GSMUA_Achr7P22530_001	Banana	endoplasmic reticulum	59.74	67.57
Solyc12g042180.1.1	Tomato	cytosol	18.04	67.41
VIT_17s0000g00310.t01	Wine grape	cytosol	61.29	62.03
Solyc03g118260.1.1	Tomato	cytosol	58.54	61.25
AT5G61980.1	Thale cress	cytosol	59.86	60.51
Bra010046.1-P	Field mustard	cytosol	56.75	60.05
CDY00242	Canola	cytosol	56.39	59.97
PGSC0003DMT400036762	Potato	cytosol	40.98	58.73
Bra029295.1-P	Field mustard	cytosol	60.45	58.7
CDY30689	Canola	cytosol	60.33	58.58
CDX86943	Canola	cytosol	49.82	58.57
Solyc12g042170.1.1	Tomato	cytosol	37.28	57.56
KRH59741	Soybean	cytosol	54.72	57.25
KRH63858	Soybean	cytosol	52.57	56.05
KRH54108	Soybean	cytosol	45.16	51.22
CDY53619	Canola	cytosol	18.64	46.29
HORVU6Hr1G059210.10	Barley	cytosol, plastid	37.99	44.92
HORVU1Hr1G047800.23	Barley	plastid	6.57	16.27
HORVU4Hr1G059060.2	Barley	mitochondrion	8.24	11.98
HORVU5Hr1G123590.1	Barley	cytosol	6.93	11.91
CDY08879	Canola	cytosol	2.39	6.35

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:1.25.40.20	MapMan:22.3.4.1	Gene3D:3.30.40.160	UniProt:A0A287RW65	InterPro:AGD1/2/3/4_BAR_plant
InterPro:AH/BAR_dom_sf	InterPro:ARFGAP/RecO	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	InterPro:BAR_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	EnsemblPlantsGene:HORVU5Hr1G077570	EnsemblPlants:HORVU5Hr1G077570.15	InterPro:IPR001164
InterPro:IPR001849	InterPro:IPR002110	InterPro:IPR004148	InterPro:IPR020683	InterPro:IPR027267	InterPro:IPR036770
InterPro:IPR038508	PFAM:PF00169	PFAM:PF01412	PFAM:PF12796	PFAM:PF16746	InterPro:PH_domain
PRINTS:PR00405	PFscan:PS50003	PFscan:PS50088	PFscan:PS50115	PFscan:PS50297	PFscan:PS51021
PANTHER:PTHR23180	PANTHER:PTHR23180:SF242	SMART:SM00105	SMART:SM00233	SMART:SM00248	SMART:SM00721
SUPFAM:SSF103657	SUPFAM:SSF48403	SUPFAM:SSF50729	SUPFAM:SSF57863	UniParc:UPI000B46116C	SEG:seg

Description

No Description!

Coordinates

chrchr5H:-:553412481..553421170

Molecular Weight (calculated)

93950.8 Da

IEP (calculated)

7.434

GRAVY (calculated)

-0.544

Length

837 amino acids

Sequence
(BLAST)

001: LYLCNCMSDK SMTIHKSMQS LEEGAELLRE RCLKYHKGCR KYTEGLGEAY DGDIAFASSL EAFGGGHNDP ISVAFGGPVM TKFTIALREI GTYKEVLRSQ
101: VEHMLNDKLL QFVDMDLHDV KDARKRFDKA SLLYDQARER YLSLKKGTRT DIATAVEDEL HSARSSFEQA RFNLVTALSN IEAKKRFEFL EAVSGTMDAH
201: LRYFKQGYEL LHQMEPYINQ VLAYAQQSRE RSNYEQAALV ERMQEFKRQI DRESRWSPNG MTDSPNGDGI QAIGRSSHKM IEAVMQSASK GKVQTIRQGY
301: LSKRSSNLRG DWKRRFFVLD NRGMLYYYRK QNSRPSSGYS NQRSSTPTEH GSGLLSRWFS SHYHGGVHDE KSVARHTVNL LTSTIKVDAD QSDLRFCFRI
401: ISPTKNYTLQ AESAMDQMDW IEKITGVIAS LLSSQSPERR LLLSPKGSGH HRTNSESSSF SSSTELDHSM SEDFMMEKNS GSGYFEHSSR VTQHHRTSMR
501: PDKPIELLRK VVGNDVCADC GAAEPDWASL NLGVLVCIEC SGVHRNLGVH ISKVRSLTLD VRVWEPSVIN LFQSLGNTFA NTIWEEMLTS SSSVDHGDAV
601: RTDGIENTPD NLAVRKPKQS DPISLKEKFI HAKYAEKDFV RKHSMDETQL AQQMWDHVSS NNKMEVYSLI VRSNADVNLT YGQTSFSSAL TLGKALLLQE
701: QPSSPSNGSS RCFDRGTVEK ISPRSSLSPA STSARTDELD GCAEGLSLLH LACRVADIGM VELLLQYGAS VNCTDSRGRT PLHHSILKGR RVHAKLLLSR
801: GADSQATDRE GRTSLQYAID SGTIDDEEIL VLLEDPR

Best Arabidopsis Sequence Match ( AT5G13300.1 )
(BLAST)

001: MHFTKLDDSP MFRKQLQSME ESAEILRERS LKFYKGCRKY TEGLGEAYDG DIAFASALET FGGGHNDPIS VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HILNDRLLQF ANMDLHEVKE ARKRFDKASL TYDQAREKFL SLRKGTKSDV AAALEQELHT SRSMFEQARF NLVTALSNVE AKKRFEFLEA VSGTMDAHLR
201: YFKQGYELLH QMEPYINQVL TYAQQSRERS NYEQAALNEK MQEYKRQVDR ESRWGSNGSN GSPNGDGIQA IGRSSHKMID AVMQSAARGK VQTIRQGYLS
301: KRSSNLRGDW KRRFFVLDSR GMLYYYRKQC SKPSGSGSQL SGQRNSSELG SGLLSRWLSS NNHGHGGVHD EKSVARHTVN LLTSTIKVDA DQSDLRFCFR
401: IISPTKNYTL QAESALDQMD WIEKITGVIA SLLSSQVPEQ RLPGSPMGSG HHRSASESSS YESSEYDHPT TEEFVCERSF LGYNERPSRS FQPQRSIRKG
501: EKPIDALRKV CGNDKCADCG APEPDWASLN LGVLVCIECS GVHRNLGVHI SKVRSLTLDV KVWEPSVISL FQALGNTFAN TVWEELLHSR SAIHFDPGLT
601: VSDKSRVMVT GKPSYADMIS IKEKYIQAKY AEKLFVRRSR DSDFPQSAAQ QMWDAVSGND KKAVYRLIVN GDADVNYVYD QTSSSSLTLS RVILVPERPK
701: REDVLLRLRN ELLDRTGSSS NISPEGSGGS SLLHCACEKA DLGMVELLLQ YGANVNASDS SGQTPLHCCL LRGKVTIARL LLTRGADPEA MNREGKTALD
801: IAAESNFTDP EVLALLSDTN GYNHRQC

Arabidopsis Description

AGD3ADP-ribosylation factor GTPase-activating protein AGD3 [Source:UniProtKB/Swiss-Prot;Acc:Q5W7F2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.