Factsheet for Solyc05g023750.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400005756	Potato	cytosol	98.65	98.65
Zm00001d049872_P001	Maize	cytosol	49.94	74.32
Solyc12g042180.1.1	Tomato	cytosol	20.2	73.66
GSMUA_Achr11P...	Banana	cytosol	71.85	71.94
GSMUA_Achr4P00060_001	Banana	cytosol	71.73	70.01
Os09t0510700-01	Rice	cytosol	70.5	68.9
TraesCS5A01G293000.1	Wheat	cytosol	70.01	68.83
TraesCS5B01G292200.1	Wheat	cytosol	69.89	68.47
TraesCS5D01G300300.2	Wheat	cytosol	69.89	67.98
EER99172	Sorghum	cytosol	68.79	67.22
HORVU5Hr1G077570.15	Barley	cytosol	68.79	67.14
Zm00001d021087_P003	Maize	cytosol	68.79	67.14
OQU80812	Sorghum	cytosol	67.32	66.75
TraesCS7A01G263800.2	Wheat	cytosol	66.59	66.1
Zm00001d031667_P006	Maize	cytosol	66.46	65.98
Solyc03g118260.1.1	Tomato	cytosol	64.38	65.75
HORVU7Hr1G055220.21	Barley	cytosol	66.46	65.34
Os08t0537600-01	Rice	plasma membrane	65.61	64.5
TraesCS7D01G264700.1	Wheat	endoplasmic reticulum	65.85	63.52
TraesCS7B01G161800.1	Wheat	endoplasmic reticulum	65.85	63.52
GSMUA_Achr7P22530_001	Banana	endoplasmic reticulum	56.3	62.16
Zm00001d009353_P001	Maize	cytosol	9.06	61.16
Solyc12g042170.1.1	Tomato	cytosol	39.9	60.15
Zm00001d015981_P001	Maize	peroxisome	10.89	58.17
Zm00001d015278_P001	Maize	mitochondrion	21.05	51.19
Zm00001d004245_P003	Maize	cytosol	12.0	51.04
Solyc04g008660.2.1	Tomato	cytosol	44.92	46.99
Zm00001d049871_P001	Maize	cytosol	10.28	43.98
Zm00001d023982_P001	Maize	cytosol	15.91	33.42
Solyc03g098500.2.1	Tomato	nucleus	8.08	26.61
Solyc07g063550.2.1	Tomato	cytosol	11.51	19.79
Solyc10g006850.2.1	Tomato	cytosol	10.89	17.8
Solyc03g006610.2.1	Tomato	cytosol	9.67	16.95
Solyc10g084690.1.1	Tomato	mitochondrion	8.94	15.9
Solyc08g076920.2.1	Tomato	nucleus	7.83	15.53
Solyc09g010520.2.1	Tomato	nucleus	8.81	15.42
Solyc08g005070.2.1	Tomato	cytosol	7.22	14.68

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:1.25.40.20	MapMan:22.3.4.1	Gene3D:3.30.40.160	InterPro:AGD1/2/3/4_BAR_plant	InterPro:AH/BAR_dom_sf
InterPro:ARFGAP/RecO	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf
InterPro:BAR_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009987
GO:GO:0016032	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164	InterPro:IPR001849
InterPro:IPR002110	InterPro:IPR004148	InterPro:IPR020683	InterPro:IPR027267	InterPro:IPR036770	InterPro:IPR038508
UniProt:K4BZL4	PFAM:PF00169	PFAM:PF01412	PFAM:PF13637	PFAM:PF16746	InterPro:PH_domain
PRINTS:PR00405	PFscan:PS50003	PFscan:PS50088	PFscan:PS50115	PFscan:PS50297	PANTHER:PTHR23180
PANTHER:PTHR23180:SF374	SMART:SM00105	SMART:SM00233	SMART:SM00248	SMART:SM00721	SUPFAM:SSF103657
SUPFAM:SSF48403	SUPFAM:SSF50729	SUPFAM:SSF57863	EnsemblPlantsGene:Solyc05g023750.2	EnsemblPlants:Solyc05g023750.2.1	UniParc:UPI00027658D7
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5:+:29237545..29248578

Molecular Weight (calculated)

91068.4 Da

IEP (calculated)

7.495

GRAVY (calculated)

-0.457

Length

817 amino acids

Sequence
(BLAST)

001: MHFGKLDDSP MFRKQLQCFE ESAESLRERS LKFYKGCRKY TEGLGEGYDG DIAFASALET FGGGHNDPIS VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HMLNDRLLQF VNIDLQDVKE ARKRFDKASL IYDQAREKFL SLRKGTKSDV ASVLEEELHN ARSTFEQARF SLVTALSNVE AKKRFEFLEA VSGTMDAHLR
201: YFKQGYELLH QMEPYINQVL TYAQQSQERS NYEKAALNEK MQEYKRQVDR ESRWLSNGSN GSPNGDGIQA IGRSSHKQIE AVMQSAARGK VQTIRQGYLS
301: KRSSNLRGDW KRRFFVLDSR GMLYYYRKQN TKPSGSGSQH SGQRNSSELG SGLLSRWLSS HYHGGVHDEK SVAHHTVNLL TSTIKVDADQ SDLRFCFRII
401: SPTKSYTLQA ESALDQMDWI EKITGVIASL LSSQAPDRCL TASPMGSGHH RSASESSSFE SSDFDPPAVE DHPSDRLISA HHDRPFRNSQ QLRSAPKSEQ
501: PIATLCRVCG NDRCADCGAA EPDWASLNLG VLVCIECSGV HRNLGVHISK VRSLTLDVKV WEPSVIALFQ SLGNTFANSV WEESLQARGA FQVNVSAASS
601: YRSDKQQQLY ISKPSHADPI STKEKFIHAK YADKSFVRRT KDGHTVAQMM WEAVRANDKK AVYRLIVSSE ADVNALYKQV VSNSSLTLAK VMLLQELPYT
701: DQSSTCLEMD LASPSERLIV GDFNGCSLLH LACQTADLGM LELLMQYGAN VNASDSSGQT PLHWCIIRGK AAFAKLLIAR GADPHALDGE SKTPYDLALG
801: SNFDDVDVLN LLSDTNA

Best Arabidopsis Sequence Match ( AT5G13300.1 )
(BLAST)

001: MHFTKLDDSP MFRKQLQSME ESAEILRERS LKFYKGCRKY TEGLGEAYDG DIAFASALET FGGGHNDPIS VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HILNDRLLQF ANMDLHEVKE ARKRFDKASL TYDQAREKFL SLRKGTKSDV AAALEQELHT SRSMFEQARF NLVTALSNVE AKKRFEFLEA VSGTMDAHLR
201: YFKQGYELLH QMEPYINQVL TYAQQSRERS NYEQAALNEK MQEYKRQVDR ESRWGSNGSN GSPNGDGIQA IGRSSHKMID AVMQSAARGK VQTIRQGYLS
301: KRSSNLRGDW KRRFFVLDSR GMLYYYRKQC SKPSGSGSQL SGQRNSSELG SGLLSRWLSS NNHGHGGVHD EKSVARHTVN LLTSTIKVDA DQSDLRFCFR
401: IISPTKNYTL QAESALDQMD WIEKITGVIA SLLSSQVPEQ RLPGSPMGSG HHRSASESSS YESSEYDHPT TEEFVCERSF LGYNERPSRS FQPQRSIRKG
501: EKPIDALRKV CGNDKCADCG APEPDWASLN LGVLVCIECS GVHRNLGVHI SKVRSLTLDV KVWEPSVISL FQALGNTFAN TVWEELLHSR SAIHFDPGLT
601: VSDKSRVMVT GKPSYADMIS IKEKYIQAKY AEKLFVRRSR DSDFPQSAAQ QMWDAVSGND KKAVYRLIVN GDADVNYVYD QTSSSSLTLS RVILVPERPK
701: REDVLLRLRN ELLDRTGSSS NISPEGSGGS SLLHCACEKA DLGMVELLLQ YGANVNASDS SGQTPLHCCL LRGKVTIARL LLTRGADPEA MNREGKTALD
801: IAAESNFTDP EVLALLSDTN GYNHRQC

Arabidopsis Description

AGD3ADP-ribosylation factor GTPase-activating protein AGD3 [Source:UniProtKB/Swiss-Prot;Acc:Q5W7F2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.