Factsheet for Os09t0510700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0681100-01
Os03t0635800-01
Os05t0556100-01
Os06t0116300-01
Os08t0537600-01
Os09t0510700-01
Os12t0604200-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13300.1	Os03t0635800-01	AT3G63300.1	19363154
AT5G13300.1	Os12t0604200-00	AT3G63300.1	19363154
AT5G13300.1	Os08t0537600-01	AT5G13300.1	15743878
AT5G13300.1	Os09t0510700-01	AT5G13300.1	15743878
AT5G13300.1	Os06t0116300-01	AT5G26980.1	15743878
AT5G13300.1	Os01t0681100-01	AT5G42080.1	15923323
AT5G13300.1	Os05t0556100-01	AT5G42080.1	15923323

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G292200.1	Wheat	cytosol	90.07	90.29
TraesCS5A01G293000.1	Wheat	cytosol	89.59	90.13
TraesCS5D01G300300.2	Wheat	cytosol	90.19	89.76
Zm00001d021087_P003	Maize	cytosol	89.59	89.49
EER99172	Sorghum	cytosol	89.47	89.47
HORVU5Hr1G077570.15	Barley	cytosol	88.76	88.65
CDX70496	Canola	cytosol	52.63	79.57
GSMUA_Achr11P...	Banana	cytosol	76.79	78.68
GSMUA_Achr4P00060_001	Banana	cytosol	77.15	77.06
Os08t0537600-01	Rice	plasma membrane	75.36	75.81
KRH45201	Soybean	cytosol	71.05	72.17
Solyc12g042180.1.1	Tomato	cytosol	19.26	71.88
VIT_01s0150g00030.t01	Wine grape	cytosol	70.69	71.03
PGSC0003DMT400005756	Potato	cytosol	69.26	70.87
CDY09784	Canola	cytosol	67.34	70.55
Solyc05g023750.2.1	Tomato	cytosol	68.9	70.5
AT5G13300.1	Thale cress	cytosol	69.14	69.89
GSMUA_Achr7P22530_001	Banana	endoplasmic reticulum	61.48	69.46
KRH01512	Soybean	cytosol	69.62	69.37
CDX69650	Canola	cytosol	68.42	69.25
CDX78515	Canola	cytosol	68.78	69.19
Bra008838.1-P	Field mustard	cytosol	68.18	69.01
Bra006193.1-P	Field mustard	cytosol	67.11	69.0
VIT_17s0000g00310.t01	Wine grape	cytosol	62.2	62.88
Solyc03g118260.1.1	Tomato	cytosol	59.69	62.38
AT5G61980.1	Thale cress	cytosol	61.0	61.59
CDY00242	Canola	cytosol	57.18	60.74
Bra010046.1-P	Field mustard	cytosol	56.58	59.8
Bra029295.1-P	Field mustard	cytosol	61.48	59.63
CDY30689	Canola	cytosol	61.36	59.51
PGSC0003DMT400036762	Potato	cytosol	41.27	59.08
Solyc12g042170.1.1	Tomato	cytosol	37.8	58.3
CDX86943	Canola	cytosol	49.64	58.29
KRH59741	Soybean	cytosol	55.02	57.5
KRH63858	Soybean	cytosol	53.71	57.2
KRH54108	Soybean	cytosol	44.98	50.95
Os02t0632500-01	Rice	cytosol, plasma membrane	43.18	47.5
CDY53619	Canola	cytosol	18.66	46.29
Os07t0563800-02	Rice	cytosol	11.0	19.33
Os10t0574800-01	Rice	plasma membrane	8.25	16.95
Os03t0854100-01	Rice	cytosol	8.01	16.26
Os03t0278400-01	Rice	plasma membrane	8.01	14.79
CDY08879	Canola	cytosol	2.87	7.62

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:1.25.40.20	MapMan:22.3.4.1	Gene3D:3.30.40.160	EntrezGene:4347541	InterPro:AGD1/2/3/4_BAR_plant
InterPro:AH/BAR_dom_sf	InterPro:ARFGAP/RecO	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:ArfGAP_dom
InterPro:ArfGAP_dom_sf	ProteinID:BAF25549.1	InterPro:BAR_dom	ProteinID:BAT08904.1	ncoils:Coil	GO:GO:0003674
GO:GO:0005096	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164
InterPro:IPR001849	InterPro:IPR002110	InterPro:IPR004148	InterPro:IPR020683	InterPro:IPR027267	InterPro:IPR036770
InterPro:IPR038508	EnsemblPlantsGene:Os09g0510700	EnsemblPlants:Os09t0510700-01	PFAM:PF00169	PFAM:PF01412	PFAM:PF12796
PFAM:PF16746	InterPro:PH_domain	PRINTS:PR00405	PFscan:PS50003	PFscan:PS50088	PFscan:PS50115
PFscan:PS50297	PANTHER:PTHR23180	PANTHER:PTHR23180:SF242	UniProt:Q0J0G6	SMART:SM00105	SMART:SM00233
SMART:SM00248	SMART:SM00721	SUPFAM:SSF103657	SUPFAM:SSF48403	SUPFAM:SSF50729	SUPFAM:SSF57863
UniParc:UPI0000DD980A	RefSeq:XP_015612554.1	SEG:seg	:	:	:

Description

Similar to GCN4-complementing protein homolog. (Os09t0510700-01)

Coordinates

chr9:-:19823916..19831332

Molecular Weight (calculated)

93686.2 Da

IEP (calculated)

7.212

GRAVY (calculated)

-0.521

Length

836 amino acids

Sequence
(BLAST)

001: MFFTRLDDSP MFRKQIQSLE EGSELLRERC LRFHKGCRKY TEGLGEAYDG DIAFASSLEA FGGGHNDPIS VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: NMLNDKLLQF VDIDLHDVKD ARKRFDKASL LYDQARERYL SLKKGTRTDV ATAVEDELHS ARSSFEQARF NLVTALSNIE AKKRFEFLEA VSGTMDAHLR
201: YFKQGYELLH QMEPYINQVL AYAQQSRERS NYEQAALVER MQEFKRQIDR ESRWSPNGIN DSPNGDGIQA IGRSSHKMIE AVMQSASKGK VQTIRQGYLS
301: KRSSNLRGDW KRRFFVLDSR GMLYYYRKQN SRPSSGYTNQ RSSAPSEHGS GLLSRWFSSH YHGGVHDEKS VARHTVNLLT STIKADADQS DLRFCFRIIS
401: PTKNYTLQAE SAMDQMDWIE KITGVIASLL SSQSPERRLL SSPKGSGHNR TASESSSFSS STELDHSISE DCMLERNSGS GYFDHSGRAI QHHRTSMKPD
501: KPIDLLRKVV GNNICADCGA AEPDWASLNL GILLCIECSG VHRNLGVHIS KVRSLTLDVR VWEPSVINLF QSLGNTFANT IWEDMLPSSS SVDHGDNSRA
601: DGLENTSHNL IFSKPKHSDH IAVKEKFIHA KYAERDYVRK LNMDDSLVAQ QMWENVSSNN KKGVYSLIVG SNADVNLTYG QTSFNSALTL GKALLLQEQP
701: TSPSDGSSRC FDRSSLERIS PRDSLSLAST SARIDELDDC VEGLSLLHLA CRVADVGMVE LLLQYGANVN SADSRGRTPL HHSILKGRHM FAKLLLSRGA
801: DSQATDRDGR TALQYAIDSG TIDDEEILVL LEDPSR

Best Arabidopsis Sequence Match ( AT5G13300.1 )
(BLAST)

001: MHFTKLDDSP MFRKQLQSME ESAEILRERS LKFYKGCRKY TEGLGEAYDG DIAFASALET FGGGHNDPIS VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HILNDRLLQF ANMDLHEVKE ARKRFDKASL TYDQAREKFL SLRKGTKSDV AAALEQELHT SRSMFEQARF NLVTALSNVE AKKRFEFLEA VSGTMDAHLR
201: YFKQGYELLH QMEPYINQVL TYAQQSRERS NYEQAALNEK MQEYKRQVDR ESRWGSNGSN GSPNGDGIQA IGRSSHKMID AVMQSAARGK VQTIRQGYLS
301: KRSSNLRGDW KRRFFVLDSR GMLYYYRKQC SKPSGSGSQL SGQRNSSELG SGLLSRWLSS NNHGHGGVHD EKSVARHTVN LLTSTIKVDA DQSDLRFCFR
401: IISPTKNYTL QAESALDQMD WIEKITGVIA SLLSSQVPEQ RLPGSPMGSG HHRSASESSS YESSEYDHPT TEEFVCERSF LGYNERPSRS FQPQRSIRKG
501: EKPIDALRKV CGNDKCADCG APEPDWASLN LGVLVCIECS GVHRNLGVHI SKVRSLTLDV KVWEPSVISL FQALGNTFAN TVWEELLHSR SAIHFDPGLT
601: VSDKSRVMVT GKPSYADMIS IKEKYIQAKY AEKLFVRRSR DSDFPQSAAQ QMWDAVSGND KKAVYRLIVN GDADVNYVYD QTSSSSLTLS RVILVPERPK
701: REDVLLRLRN ELLDRTGSSS NISPEGSGGS SLLHCACEKA DLGMVELLLQ YGANVNASDS SGQTPLHCCL LRGKVTIARL LLTRGADPEA MNREGKTALD
801: IAAESNFTDP EVLALLSDTN GYNHRQC

Arabidopsis Description

AGD3ADP-ribosylation factor GTPase-activating protein AGD3 [Source:UniProtKB/Swiss-Prot;Acc:Q5W7F2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.