Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78809 | Canola | cytosol | 61.27 | 49.36 |
| CDY44506 | Canola | cytosol | 61.9 | 49.24 |
| CDY01499 | Canola | cytosol | 63.49 | 49.14 |
| CDX90439 | Canola | cytosol | 63.17 | 48.54 |
| CDY58500 | Canola | cytosol | 54.6 | 42.89 |
| CDX77687 | Canola | cytosol | 53.97 | 42.29 |
| CDY59045 | Canola | cytosol | 40.0 | 32.06 |
| CDY07784 | Canola | mitochondrion | 12.06 | 8.78 |
| CDX79739 | Canola | mitochondrion | 12.38 | 8.61 |
| CDX74953 | Canola | cytosol | 12.06 | 8.41 |
| CDX78196 | Canola | cytosol | 11.75 | 8.31 |
| CDY18435 | Canola | cytosol | 11.11 | 8.29 |
| CDY69342 | Canola | mitochondrion | 11.43 | 8.22 |
| CDX73533 | Canola | cytosol | 11.43 | 8.07 |
| CDY30849 | Canola | cytosol | 11.11 | 7.81 |
| CDX76193 | Canola | cytosol | 11.11 | 7.76 |
| Zm00001d049871_P001 | Maize | cytosol | 4.44 | 7.33 |
| CDY43831 | Canola | cytosol | 10.79 | 7.05 |
| CDY43044 | Canola | cytosol | 10.48 | 6.9 |
| CDX95838 | Canola | cytosol | 5.4 | 6.69 |
| CDY52243 | Canola | cytosol | 9.84 | 6.58 |
| CDY63834 | Canola | cytosol | 9.84 | 6.54 |
| CDX92147 | Canola | cytosol | 5.08 | 6.3 |
| CDY64205 | Canola | endoplasmic reticulum | 9.84 | 6.29 |
| CDY28774 | Canola | endoplasmic reticulum, plasma membrane | 9.52 | 6.09 |
| CDY16083 | Canola | cytosol | 4.44 | 5.93 |
| CDY53619 | Canola | cytosol | 6.03 | 5.64 |
| CDY26647 | Canola | plastid | 3.17 | 5.52 |
| Zm00001d015981_P001 | Maize | peroxisome | 2.22 | 4.58 |
| Zm00001d004245_P003 | Maize | cytosol | 2.54 | 4.17 |
| CDY23645 | Canola | cytosol | 1.9 | 3.7 |
| CDY40502 | Canola | cytosol | 6.98 | 2.88 |
| Os09t0510700-01 | Rice | cytosol | 7.62 | 2.87 |
| CDX86943 | Canola | cytosol | 6.35 | 2.81 |
| OQU80812 | Sorghum | cytosol | 7.3 | 2.79 |
| EER99172 | Sorghum | cytosol | 7.3 | 2.75 |
| Zm00001d021087_P003 | Maize | cytosol | 7.3 | 2.75 |
| TraesCS7A01G263800.2 | Wheat | cytosol | 6.98 | 2.67 |
| Zm00001d031667_P006 | Maize | cytosol | 6.98 | 2.67 |
| GSMUA_Achr4P00060_001 | Banana | cytosol | 6.98 | 2.63 |
| TraesCS7D01G264700.1 | Wheat | endoplasmic reticulum | 6.98 | 2.6 |
| TraesCS7B01G161800.1 | Wheat | endoplasmic reticulum | 6.98 | 2.6 |
| Solyc12g042170.1.1 | Tomato | cytosol | 4.44 | 2.58 |
| CDY00242 | Canola | cytosol | 6.35 | 2.54 |
| HORVU7Hr1G055220.21 | Barley | cytosol | 6.67 | 2.53 |
| CDY54764 | Canola | cytosol | 6.03 | 2.49 |
| CDY19326 | Canola | cytosol | 6.03 | 2.47 |
| CDX97917 | Canola | cytosol | 6.03 | 2.47 |
| GSMUA_Achr7P22530_001 | Banana | endoplasmic reticulum | 5.71 | 2.43 |
| Os08t0537600-01 | Rice | plasma membrane | 6.35 | 2.41 |
| TraesCS5A01G293000.1 | Wheat | cytosol | 6.35 | 2.41 |
| TraesCS5B01G292200.1 | Wheat | cytosol | 6.35 | 2.4 |
| HORVU5Hr1G077570.15 | Barley | cytosol | 6.35 | 2.39 |
| TraesCS5D01G300300.2 | Wheat | cytosol | 6.35 | 2.38 |
| GSMUA_Achr11P... | Banana | cytosol | 6.03 | 2.33 |
| PGSC0003DMT400005756 | Potato | cytosol | 6.03 | 2.33 |
| CDY30689 | Canola | cytosol | 6.35 | 2.32 |
| CDX86944 | Canola | cytosol | 0.95 | 2.29 |
| VIT_01s0150g00030.t01 | Wine grape | cytosol | 5.71 | 2.16 |
| CDY09784 | Canola | cytosol | 5.4 | 2.13 |
| CDX69650 | Canola | cytosol | 5.4 | 2.06 |
| CDX78515 | Canola | cytosol | 5.4 | 2.05 |
| KRH45201 | Soybean | cytosol | 5.08 | 1.94 |
| KRH01512 | Soybean | cytosol | 4.76 | 1.79 |
| Zm00001d009353_P001 | Maize | cytosol | 0.63 | 1.65 |
| Zm00001d049872_P001 | Maize | cytosol | 2.22 | 1.28 |
| CDY71222 | Canola | cytosol | 0.32 | 1.04 |
| Zm00001d015278_P001 | Maize | mitochondrion | 0.95 | 0.89 |
| Zm00001d023982_P001 | Maize | cytosol | 0.32 | 0.26 |
| Solyc12g042180.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| CDX70496 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY08879 | EnsemblPlantsGene:GSBRNA2T00000867001 | Gene3D:3.30.40.160 | InterPro:ArfGAP_dom_sf | InterPro:IPR038508 | PANTHER:PTHR23180 |
| PANTHER:PTHR23180:SF381 | ProteinID:CDY08879 | ProteinID:CDY08879.1 | SEG:seg | UniParc:UPI0004EB724F | UniProt:A0A078F767 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC08g11090DBnaC08g11090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F767]
Coordinates
chrLK031990:+:135615..136997
Molecular Weight (calculated)
34057.3 Da
IEP (calculated)
9.071
GRAVY (calculated)
-0.372
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MMFDGNNRAQ VFFKQHGCTD GGKIKAKYTS RAADLYREIL AKEVAKAIAE DTTIALPEES TVKEELPPRE TSAVLQLCLV RFKRPIGAKR TTSKTGGLCA
101: RKLTSKKPEE VAPVIPAAAS AGSSYASEFE YNDGLQSGGQ SSGGGGPNAK SISSAQYFGD QNKNADLESK ATLQKFSGSI SISSADFFGH DQDDSSVDIT
201: ASDLINRLSF QAQQNLSSIV NIAGETKKLG TLASGIFSDL QNRMLKRWIS SIQLLRHQCV LNVNLELLSL SRREKPLTLP LMLHGSGSGY VEAETYRNAE
301: ARSFKKLGSG YVLET
101: RKLTSKKPEE VAPVIPAAAS AGSSYASEFE YNDGLQSGGQ SSGGGGPNAK SISSAQYFGD QNKNADLESK ATLQKFSGSI SISSADFFGH DQDDSSVDIT
201: ASDLINRLSF QAQQNLSSIV NIAGETKKLG TLASGIFSDL QNRMLKRWIS SIQLLRHQCV LNVNLELLSL SRREKPLTLP LMLHGSGSGY VEAETYRNAE
301: ARSFKKLGSG YVLET
001: MASENLNDKI SVFKKLKAKS DNKICFDCNA KNPTWASVTY GIFLCIDCSA VHRSLGVHIS FVRSTNLDSW SSEQLKMMIY GGNNRAQVFF KQYGWSDGGK
101: TEAKYTSRAA DLYKQILAKE VAKSKAEEEL DLPPSPPDST QVPNGLSSIK TSEALKESNT LKQQEKPDVV PVSPRISRSV KKPLGAKKTG KTGGLGARKL
201: TTKSSGTLYD QKPEESVIIQ ATSPVSAKSA RSSFSSRFDY ADNVQNREDY MSPQVVSHVA PPKSSGFFEE ELEMNGGRFQ KKPITSSSKL QIQETDEARK
301: KFTNAKSISS AQYFGNDNNS ADLEAKSSLK KFSGSSAISS ADLFGDGDGD FPLDLTAGDL LNRLSLQAQQ DISSLKNMAE ETKKKLGSVA SSLWV
101: TEAKYTSRAA DLYKQILAKE VAKSKAEEEL DLPPSPPDST QVPNGLSSIK TSEALKESNT LKQQEKPDVV PVSPRISRSV KKPLGAKKTG KTGGLGARKL
201: TTKSSGTLYD QKPEESVIIQ ATSPVSAKSA RSSFSSRFDY ADNVQNREDY MSPQVVSHVA PPKSSGFFEE ELEMNGGRFQ KKPITSSSKL QIQETDEARK
301: KFTNAKSISS AQYFGNDNNS ADLEAKSSLK KFSGSSAISS ADLFGDGDGD FPLDLTAGDL LNRLSLQAQQ DISSLKNMAE ETKKKLGSVA SSLWV
Arabidopsis Description
AGD10RPA [Source:UniProtKB/TrEMBL;Acc:A0A178VQN0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.