Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43044 | Canola | cytosol | 93.78 | 94.56 |
| CDY71222 | Canola | cytosol | 18.05 | 90.62 |
| CDY52243 | Canola | cytosol | 85.89 | 87.9 |
| CDY63834 | Canola | cytosol | 85.48 | 86.92 |
| AT5G54310.1 | Thale cress | cytosol | 84.65 | 84.47 |
| CDY64205 | Canola | endoplasmic reticulum | 83.61 | 81.74 |
| CDY28774 | Canola | endoplasmic reticulum, plasma membrane | 81.95 | 80.12 |
| VIT_19s0014g03510.t01 | Wine grape | cytosol | 61.83 | 62.34 |
| Solyc07g063550.2.1 | Tomato | cytosol | 58.92 | 59.79 |
| PGSC0003DMT400049649 | Potato | cytosol | 58.51 | 59.37 |
| KRH22157 | Soybean | cytosol | 57.47 | 57.59 |
| KRH27179 | Soybean | cytosol | 56.02 | 55.79 |
| KRH26038 | Soybean | cytosol | 57.47 | 55.4 |
| PGSC0003DMT400064425 | Potato | cytosol | 52.07 | 53.29 |
| Solyc10g006850.2.1 | Tomato | cytosol | 52.07 | 50.2 |
| KRH55419 | Soybean | cytosol | 52.49 | 49.03 |
| KRH30767 | Soybean | nucleus | 24.69 | 48.97 |
| CDX92147 | Canola | cytosol | 23.24 | 44.09 |
| CDX95838 | Canola | cytosol | 23.03 | 43.7 |
| Zm00001d016547_P001 | Maize | cytosol, plastid | 29.88 | 27.07 |
| Zm00001d046873_P001 | Maize | cytosol, plastid | 29.88 | 27.07 |
| Zm00001d051030_P001 | Maize | cytosol, plastid | 29.88 | 27.07 |
| CDY07784 | Canola | mitochondrion | 18.26 | 20.32 |
| CDX79739 | Canola | mitochondrion | 18.67 | 19.87 |
| CDY44506 | Canola | cytosol | 16.18 | 19.7 |
| CDX77687 | Canola | cytosol | 16.39 | 19.65 |
| CDY58500 | Canola | cytosol | 15.98 | 19.2 |
| CDX78809 | Canola | cytosol | 15.56 | 19.18 |
| CDY69342 | Canola | mitochondrion | 17.43 | 19.18 |
| CDY30849 | Canola | cytosol | 17.63 | 18.97 |
| CDY18435 | Canola | cytosol | 16.6 | 18.96 |
| CDX78196 | Canola | cytosol | 17.43 | 18.88 |
| CDX76193 | Canola | cytosol | 17.63 | 18.85 |
| CDX74953 | Canola | cytosol | 17.43 | 18.58 |
| CDX73533 | Canola | cytosol | 17.01 | 18.39 |
| CDY01499 | Canola | cytosol | 15.35 | 18.18 |
| CDX90439 | Canola | cytosol | 15.35 | 18.05 |
| CDY59045 | Canola | cytosol | 14.11 | 17.3 |
| CDY53619 | Canola | cytosol | 10.58 | 15.13 |
| CDY23645 | Canola | cytosol | 4.56 | 13.58 |
| CDY16083 | Canola | cytosol | 6.22 | 12.71 |
| CDY26647 | Canola | plastid | 4.77 | 12.71 |
| CDX86943 | Canola | cytosol | 16.8 | 11.38 |
| CDY08879 | Canola | cytosol | 7.05 | 10.79 |
| CDY09784 | Canola | cytosol | 17.22 | 10.4 |
| CDY00242 | Canola | cytosol | 16.8 | 10.29 |
| CDY19326 | Canola | cytosol | 16.39 | 10.27 |
| CDX97917 | Canola | cytosol | 16.18 | 10.14 |
| CDX78515 | Canola | cytosol | 17.43 | 10.11 |
| CDX69650 | Canola | cytosol | 17.22 | 10.05 |
| CDY30689 | Canola | cytosol | 17.22 | 9.63 |
| CDY40502 | Canola | cytosol | 13.9 | 8.78 |
| CDY54764 | Canola | cytosol | 13.69 | 8.66 |
| CDX70496 | Canola | cytosol | 7.26 | 6.33 |
| CDX86944 | Canola | cytosol | 0.41 | 1.53 |
Protein Annotations
| MapMan:22.3.4.2 | Gene3D:3.30.40.160 | GO:A0A078I1Z1 | UniProt:A0A078I1Z1 | InterPro:ARFGAP/RecO | InterPro:ArfGAP_dom |
| InterPro:ArfGAP_dom_sf | EnsemblPlants:CDY43831 | ProteinID:CDY43831 | ProteinID:CDY43831.1 | GO:GO:0003674 | GO:GO:0005096 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043547 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00077350001 |
| InterPro:IPR001164 | InterPro:IPR038508 | PFAM:PF01412 | PRINTS:PR00405 | PFscan:PS50115 | PANTHER:PTHR23180 |
| PANTHER:PTHR23180:SF160 | SMART:SM00105 | SUPFAM:SSF57863 | UniParc:UPI0004EE0403 | SEG:seg | : |
Description
BnaC03g14640DBnaC03g14640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I1Z1]
Coordinates
chrLK032569:+:149908..153494
Molecular Weight (calculated)
52756.0 Da
IEP (calculated)
8.303
GRAVY (calculated)
-0.701
Length
482 amino acids
Sequence
(BLAST)
(BLAST)
001: MNEKANVSKE LNARHRKILE GLLKHPENRE CADCKTKGPR WASVNLGIFI CMQCSGIHRS LGVHISKVRS ATLDTWLPEQ VAFIHSMGNE RANSYWEAEL
101: PPNYDRVGIE NFIRAKYEEK RWVSKGEKAR SPPRVEQERR RSVERAVPGY EHGHSSSPVN LFEEKKTVQA PRTRSSIPAT RISLPVPPRG PEQVIKPQQK
201: IEAVAAPVEP TKPAVNVAPA SDPPKVDFAT DLFNMLSVDE PSANTSEAAP ADDNLWDGFQ SAGNGQTAEK IVTAKLEEKK PDESSSPPAT GIEDLFRDTP
301: NFTAQQAPQK DVKGDIMSLF EKSNMVSPFA MQQQQFAMLA QQQALYMAAA KAAGGTPNGV NQQAVANALN IASANWSNNG YQIPGMTKPG GGQPDLQKLM
401: QNMNANMNMR PVQPQENTPQ YPISNFYTTG QANNAANGMT SYSTGKPQSS TAAQQPTGTT PSSQSGKEFD FSSLMDGMFT KH
101: PPNYDRVGIE NFIRAKYEEK RWVSKGEKAR SPPRVEQERR RSVERAVPGY EHGHSSSPVN LFEEKKTVQA PRTRSSIPAT RISLPVPPRG PEQVIKPQQK
201: IEAVAAPVEP TKPAVNVAPA SDPPKVDFAT DLFNMLSVDE PSANTSEAAP ADDNLWDGFQ SAGNGQTAEK IVTAKLEEKK PDESSSPPAT GIEDLFRDTP
301: NFTAQQAPQK DVKGDIMSLF EKSNMVSPFA MQQQQFAMLA QQQALYMAAA KAAGGTPNGV NQQAVANALN IASANWSNNG YQIPGMTKPG GGQPDLQKLM
401: QNMNANMNMR PVQPQENTPQ YPISNFYTTG QANNAANGMT SYSTGKPQSS TAAQQPTGTT PSSQSGKEFD FSSLMDGMFT KH
001: MNEKANVSKE LNARHRKILE GLLKHPENRE CADCKTKGPR WASVNLGIFI CMQCSGIHRS LGVHISKVRS ATLDTWLPEQ VAFIQSMGND KANSYWEAEL
101: PPNYDRVGIE NFIRAKYEEK RWVSRGEKAR SPPRVEQERR KSVERSGPGY EHGHSSSPVN LFEERKTIPA SRTRNNVAAT RINLPVPPQG PSQVIKPQQK
201: MESAATPVER EKQAVNVAPA SDPPKVDFAT DLFNMLSMDD STTNTSEATP GDTPADDNSW AGFQSAGSGQ TAEKIVTAKP AESSSPPASS SDFEDLFKDT
301: PNLTTQQAPK DVKGDIMSLF EKTNIVSPFA MHQQQVAMLA QQQALYMAAA KAAGGTPNGV NQQAIANALN VASANWSNPG GYQIPGMTNP VGGQADLQKL
401: MQNMNMNANM NTRPAQPQEN TLQYPSSSFY TMGQANQVNG MTPNSTGKPQ SSSATQPTST TPSSQSGKDF DFSSLMDGMF TKH
101: PPNYDRVGIE NFIRAKYEEK RWVSRGEKAR SPPRVEQERR KSVERSGPGY EHGHSSSPVN LFEERKTIPA SRTRNNVAAT RINLPVPPQG PSQVIKPQQK
201: MESAATPVER EKQAVNVAPA SDPPKVDFAT DLFNMLSMDD STTNTSEATP GDTPADDNSW AGFQSAGSGQ TAEKIVTAKP AESSSPPASS SDFEDLFKDT
301: PNLTTQQAPK DVKGDIMSLF EKTNIVSPFA MHQQQVAMLA QQQALYMAAA KAAGGTPNGV NQQAIANALN VASANWSNPG GYQIPGMTNP VGGQADLQKL
401: MQNMNMNANM NTRPAQPQEN TLQYPSSSFY TMGQANQVNG MTPNSTGKPQ SSSATQPTST TPSSQSGKDF DFSSLMDGMF TKH
Arabidopsis Description
AGD5Nevershed [Source:UniProtKB/TrEMBL;Acc:C4NZX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.