Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79739 | Canola | mitochondrion | 96.3 | 92.05 |
| Bra000005.1-P | Field mustard | mitochondrion | 99.08 | 89.94 |
| CDY23645 | Canola | cytosol | 31.41 | 83.95 |
| AT2G37550.1 | Thale cress | mitochondrion | 87.99 | 83.55 |
| CDX74953 | Canola | cytosol | 86.14 | 82.52 |
| CDY69342 | Canola | mitochondrion | 81.76 | 80.82 |
| CDY16083 | Canola | cytosol | 43.88 | 80.51 |
| CDY26647 | Canola | plastid | 31.87 | 76.24 |
| CDX73533 | Canola | cytosol | 75.98 | 73.77 |
| CDX78196 | Canola | cytosol | 75.06 | 73.03 |
| CDY30849 | Canola | cytosol | 75.29 | 72.77 |
| CDX76193 | Canola | cytosol | 74.83 | 71.84 |
| CDY18435 | Canola | cytosol | 67.67 | 69.43 |
| CDY71222 | Canola | cytosol | 8.55 | 38.54 |
| CDX95838 | Canola | cytosol | 14.55 | 24.8 |
| CDX92147 | Canola | cytosol | 14.09 | 24.02 |
| CDY01499 | Canola | cytosol | 21.48 | 22.85 |
| CDY44506 | Canola | cytosol | 20.79 | 22.73 |
| CDX90439 | Canola | cytosol | 21.48 | 22.68 |
| CDX77687 | Canola | cytosol | 20.79 | 22.39 |
| CDX78809 | Canola | cytosol | 20.09 | 22.25 |
| CDY58500 | Canola | cytosol | 20.32 | 21.95 |
| CDY59045 | Canola | cytosol | 17.78 | 19.59 |
| CDY43044 | Canola | cytosol | 20.32 | 18.41 |
| CDY63834 | Canola | cytosol | 20.09 | 18.35 |
| CDY43831 | Canola | cytosol | 20.32 | 18.26 |
| CDY52243 | Canola | cytosol | 19.17 | 17.62 |
| CDY64205 | Canola | endoplasmic reticulum | 19.63 | 17.24 |
| CDY28774 | Canola | endoplasmic reticulum, plasma membrane | 18.48 | 16.23 |
| CDY08879 | Canola | cytosol | 8.78 | 12.06 |
| CDY53619 | Canola | cytosol | 9.01 | 11.57 |
| CDX86943 | Canola | cytosol | 14.55 | 8.85 |
| CDY09784 | Canola | cytosol | 15.24 | 8.27 |
| CDY00242 | Canola | cytosol | 14.55 | 8.01 |
| CDX69650 | Canola | cytosol | 15.24 | 7.99 |
| CDX78515 | Canola | cytosol | 15.24 | 7.94 |
| CDY19326 | Canola | cytosol | 13.86 | 7.8 |
| CDX97917 | Canola | cytosol | 13.86 | 7.8 |
| CDY30689 | Canola | cytosol | 14.78 | 7.42 |
| CDY54764 | Canola | cytosol | 12.47 | 7.09 |
| CDY40502 | Canola | cytosol | 11.78 | 6.68 |
| CDX70496 | Canola | cytosol | 6.0 | 4.7 |
| CDX86944 | Canola | cytosol | 0.46 | 1.53 |
Protein Annotations
| MapMan:22.3.4.2 | Gene3D:3.30.40.160 | GO:A0A078F406 | UniProt:A0A078F406 | InterPro:ARFGAP/RecO | InterPro:ArfGAP_dom |
| InterPro:ArfGAP_dom_sf | EnsemblPlants:CDY07784 | ProteinID:CDY07784 | ProteinID:CDY07784.1 | GO:GO:0003674 | GO:GO:0005096 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043547 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00124918001 |
| InterPro:IPR001164 | InterPro:IPR038508 | PFAM:PF01412 | PRINTS:PR00405 | PFscan:PS50115 | PANTHER:PTHR23180 |
| PANTHER:PTHR23180:SF35 | SMART:SM00105 | SUPFAM:SSF57863 | UniParc:UPI0004EE4182 | SEG:seg | : |
Description
BnaA03g17270DBnaA03g17270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F406]
Coordinates
chrLK031980:+:948708..951320
Molecular Weight (calculated)
46530.3 Da
IEP (calculated)
7.443
GRAVY (calculated)
-0.797
Length
433 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAARRLRTL QSQAENKVCV DCSQKNPQWA SVSYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSEIQIK KMESGGNERL NKFLALYGIS KETDIVAKYN
101: SNAASVYRDR IQALAEGRQW RDPPVVKESV SVSKKKPPLG NGNNNGGWDD WEADDSFRSS SDMRRNQSAS DFRASGGRGA PAKSKSSEDI YSRSQLEASA
201: ANKESFFAKR MAENENKPEG LPPSQGGKYV GFGSSPGPAP RSNYQGGGGG GDVFSVMSEG FGRLSLVAAS AANVVQTGTM EFTSKVKEGG LDHTVSETVN
301: VVASKTTEIG QRTWGIMKGV MAIASQKVEE FTKEEASTWN QQNTNEGNGY YQNKAATNSS LGGSQSSSSY QNNKPSQTPK VSTSNDDDGW AGWGDNDGKD
401: DDDDGYYQSA AGDKKSVGHN GKSDTAWTGG GFL
101: SNAASVYRDR IQALAEGRQW RDPPVVKESV SVSKKKPPLG NGNNNGGWDD WEADDSFRSS SDMRRNQSAS DFRASGGRGA PAKSKSSEDI YSRSQLEASA
201: ANKESFFAKR MAENENKPEG LPPSQGGKYV GFGSSPGPAP RSNYQGGGGG GDVFSVMSEG FGRLSLVAAS AANVVQTGTM EFTSKVKEGG LDHTVSETVN
301: VVASKTTEIG QRTWGIMKGV MAIASQKVEE FTKEEASTWN QQNTNEGNGY YQNKAATNSS LGGSQSSSSY QNNKPSQTPK VSTSNDDDGW AGWGDNDGKD
401: DDDDGYYQSA AGDKKSVGHN GKSDTAWTGG GFL
001: MAAARRLRTL QSQPENKVCV DCSQKNPQWA SISYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSEIQIK KMDAGGNERL NNFLAQYGIS KETDIISKYN
101: SNAASVYRDR IQALAEGRQW RDPPIVKESV GGGLMNKKPP LSQGGGRDSG NGGWDNWDND DSFRSTDMRR NQSAGDFRSS GGRGAPAKSK SSEDIYSRSQ
201: LEASAANKES FFAKRMAENE SKPEGLPPSQ GGKYVGFGSS PGPAPRSNQQ SGGGDVFSVM SEGFGRLSLV AASAANVVQT GTMEFTSKVK EGGLDQTVSE
301: TVNVVASKTT EIGQRTWGIM KGVMAIASQK VEEFTKEEAS TWNQQNKTEG NGYYQNSGIG NKTANSSFGG SQSSSSGHNN SYRNSNSWDD WGEENNSKKE
401: AAPKVSTSND DDDGGWAGWD DNDAKDDDFY YQPASDKKSV GHNGKSDTAW TGGGFL
101: SNAASVYRDR IQALAEGRQW RDPPIVKESV GGGLMNKKPP LSQGGGRDSG NGGWDNWDND DSFRSTDMRR NQSAGDFRSS GGRGAPAKSK SSEDIYSRSQ
201: LEASAANKES FFAKRMAENE SKPEGLPPSQ GGKYVGFGSS PGPAPRSNQQ SGGGDVFSVM SEGFGRLSLV AASAANVVQT GTMEFTSKVK EGGLDQTVSE
301: TVNVVASKTT EIGQRTWGIM KGVMAIASQK VEEFTKEEAS TWNQQNKTEG NGYYQNSGIG NKTANSSFGG SQSSSSGHNN SYRNSNSWDD WGEENNSKKE
401: AAPKVSTSND DDDGGWAGWD DNDAKDDDFY YQPASDKKSV GHNGKSDTAW TGGGFL
Arabidopsis Description
AGD7ADP-ribosylation factor GTPase-activating protein AGD7 [Source:UniProtKB/Swiss-Prot;Acc:O80925]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.