Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024999.1-P | Field mustard | cytosol | 90.02 | 98.9 |
| CDX77687 | Canola | cytosol | 96.51 | 96.27 |
| AT5G46750.1 | Thale cress | cytosol | 84.54 | 84.33 |
| CDX78809 | Canola | cytosol | 74.31 | 76.21 |
| CDY44506 | Canola | cytosol | 75.06 | 76.01 |
| CDY01499 | Canola | cytosol | 75.56 | 74.45 |
| CDX90439 | Canola | cytosol | 76.06 | 74.39 |
| KRH45437 | Soybean | endoplasmic reticulum, mitochondrion | 67.08 | 66.75 |
| KRH75607 | Soybean | cytosol | 66.83 | 66.5 |
| VIT_02s0012g01330.t01 | Wine grape | cytosol | 66.83 | 66.17 |
| Solyc08g005070.2.1 | Tomato | cytosol | 64.84 | 64.68 |
| Solyc08g076920.2.1 | Tomato | nucleus | 66.33 | 64.56 |
| PGSC0003DMT400045159 | Potato | cytosol | 66.08 | 64.32 |
| PGSC0003DMT400002955 | Potato | cytosol | 65.09 | 64.29 |
| GSMUA_Achr4P28870_001 | Banana | cytosol | 62.84 | 62.38 |
| GSMUA_Achr4P21720_001 | Banana | cytosol | 63.09 | 62.32 |
| Os10t0574800-01 | Rice | plasma membrane | 62.59 | 61.67 |
| EER91883 | Sorghum | cytosol | 62.59 | 61.67 |
| GSMUA_Achr11P... | Banana | cytosol | 61.35 | 61.19 |
| GSMUA_Achr2P18150_001 | Banana | cytosol | 61.6 | 61.14 |
| CDY59045 | Canola | cytosol | 59.35 | 60.56 |
| TraesCS1A01G193000.1 | Wheat | cytosol | 61.1 | 60.49 |
| TraesCS1D01G196700.1 | Wheat | cytosol | 60.6 | 60.0 |
| Os03t0854100-01 | Rice | cytosol | 61.6 | 59.95 |
| Zm00001d034885_P002 | Maize | cytosol | 61.35 | 59.13 |
| EER90493 | Sorghum | cytosol | 61.1 | 58.89 |
| Zm00001d012827_P002 | Maize | cytosol | 61.6 | 58.67 |
| TraesCS4A01G323700.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 58.6 | 56.76 |
| Zm00001d047020_P002 | Maize | cytosol | 62.09 | 56.59 |
| TraesCS5D01G554100.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 58.35 | 56.52 |
| CDY08879 | Canola | cytosol | 42.89 | 54.6 |
| TraesCS1B01G207900.1 | Wheat | mitochondrion, plastid | 61.1 | 52.02 |
| Zm00001d030031_P002 | Maize | plastid | 61.85 | 51.35 |
| TraesCS5B01G554600.1 | Wheat | cytosol, plastid | 58.6 | 50.87 |
| HORVU5Hr1G123590.1 | Barley | cytosol | 59.1 | 48.67 |
| CDY71222 | Canola | cytosol | 8.73 | 36.46 |
| HORVU1Hr1G047800.23 | Barley | plastid | 19.95 | 23.67 |
| CDY18435 | Canola | cytosol | 21.7 | 20.62 |
| CDY07784 | Canola | mitochondrion | 21.95 | 20.32 |
| CDY69342 | Canola | mitochondrion | 21.7 | 19.86 |
| CDX74953 | Canola | cytosol | 21.95 | 19.47 |
| CDX95838 | Canola | cytosol | 12.22 | 19.29 |
| CDX76193 | Canola | cytosol | 21.45 | 19.07 |
| CDX79739 | Canola | mitochondrion | 21.45 | 18.98 |
| CDY30849 | Canola | cytosol | 21.2 | 18.97 |
| CDX92147 | Canola | cytosol | 11.97 | 18.9 |
| CDX78196 | Canola | cytosol | 20.7 | 18.65 |
| CDX73533 | Canola | cytosol | 20.7 | 18.61 |
| CDY52243 | Canola | cytosol | 18.95 | 16.14 |
| CDY43044 | Canola | cytosol | 19.2 | 16.11 |
| CDY43831 | Canola | cytosol | 19.2 | 15.98 |
| CDY28774 | Canola | endoplasmic reticulum, plasma membrane | 18.45 | 15.01 |
| CDY63834 | Canola | cytosol | 17.71 | 14.98 |
| CDY64205 | Canola | endoplasmic reticulum | 17.71 | 14.4 |
| CDY23645 | Canola | cytosol | 4.49 | 11.11 |
| CDY53619 | Canola | cytosol | 8.73 | 10.39 |
| CDY16083 | Canola | cytosol | 5.49 | 9.32 |
| CDX86943 | Canola | cytosol | 15.71 | 8.85 |
| CDY26647 | Canola | plastid | 3.99 | 8.84 |
| CDX97917 | Canola | cytosol | 15.71 | 8.19 |
| CDY00242 | Canola | cytosol | 15.96 | 8.13 |
| CDY19326 | Canola | cytosol | 15.46 | 8.06 |
| CDY09784 | Canola | cytosol | 15.96 | 8.02 |
| CDX69650 | Canola | cytosol | 16.21 | 7.87 |
| CDX78515 | Canola | cytosol | 15.96 | 7.7 |
| CDY40502 | Canola | cytosol | 14.46 | 7.6 |
| CDY30689 | Canola | cytosol | 15.71 | 7.31 |
| CDY54764 | Canola | cytosol | 13.47 | 7.09 |
| CDX70496 | Canola | cytosol | 7.98 | 5.79 |
| CDX86944 | Canola | cytosol | 0.5 | 1.53 |
Protein Annotations
| MapMan:22.3.4.2 | Gene3D:3.30.40.160 | GO:A0A078J6B6 | UniProt:A0A078J6B6 | InterPro:ARFGAP/RecO | InterPro:ArfGAP_dom |
| InterPro:ArfGAP_dom_sf | EnsemblPlants:CDY58500 | ProteinID:CDY58500 | ProteinID:CDY58500.1 | GO:GO:0003674 | GO:GO:0005096 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043547 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00023682001 |
| InterPro:IPR001164 | InterPro:IPR038508 | PFAM:PF01412 | PRINTS:PR00405 | PFscan:PS50115 | PANTHER:PTHR23180 |
| PANTHER:PTHR23180:SF381 | SMART:SM00105 | SUPFAM:SSF57863 | UniParc:UPI0004EE206E | SEG:seg | : |
Description
BnaA06g40320DBnaA06g40320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J6B6]
Coordinates
chrLK033674:-:15757..17888
Molecular Weight (calculated)
42958.9 Da
IEP (calculated)
8.821
GRAVY (calculated)
-0.492
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MATENHADKN VVFRKLKAKS ENKVCFDCSA KNPTWASVTY GVFLCIDCSA VHRNLGVHIS FVRSTNLDSW SPEQLRTMMF GGNNRAQVFF KQHGWNDGGR
101: IDAKYTSRAA DLYKQTLAKE VAKAMADEEA PLPSSVVATS QPVESSEPPA KETSAAVAVA VSSSPKASQG AVASTFKKPL GARKTGKTGG LGARKLTTKP
201: KENLYDQKPE EPAPVIPAVS STKITSSSSS AAGSSFASRF EYFDEEQSGG QSGTRVLSHV APPKSSNFFS EYGMDTAFSK KSSSSSSKVQ VEETDEARKK
301: FSNAKSISSA QFYGNQNRDA DLESKATLQK FSGSAAISSA DLFGHGQDDS NIDITASDLI NRISFQAQQD VSSLVNIAEE TTKKLGSLAS GIFGDLQDRM
401: L
101: IDAKYTSRAA DLYKQTLAKE VAKAMADEEA PLPSSVVATS QPVESSEPPA KETSAAVAVA VSSSPKASQG AVASTFKKPL GARKTGKTGG LGARKLTTKP
201: KENLYDQKPE EPAPVIPAVS STKITSSSSS AAGSSFASRF EYFDEEQSGG QSGTRVLSHV APPKSSNFFS EYGMDTAFSK KSSSSSSKVQ VEETDEARKK
301: FSNAKSISSA QFYGNQNRDA DLESKATLQK FSGSAAISSA DLFGHGQDDS NIDITASDLI NRISFQAQQD VSSLVNIAEE TTKKLGSLAS GIFGDLQDRM
401: L
001: MATENLTDKN VVFRKLKSKS ENKVCFDCSA KNPTWASVPY GIFLCIDCSA VHRSLGVHIS FVRSTNLDSW SPEQLRTMMF GGNNRAQVFF KQHGWNDGGK
101: IEAKYTSRAA DMYRQTLAKE VAKAMAEETV LPSLSSVATS QPVESSENGF TSESPKESSL KQEAAVVSSP KASQKVVAST FKKPLVSRKS GKTGGLGARK
201: LTTKSKDNLY EQKPEEPVPV IPAASPTNDT SAAGSSFASR FEYFDDEQSG GQSGTRVLSH VAPPKSSNFF NEFGMDSAFP KKSSSSSSKA QVEETDEARK
301: KFSNAKSISS AQFFGNQNRD ADLDSKATLQ KFSGSAAISS SDLFGHGPDD SNIDITASDL INRISFQAQQ DMSSIANLAE ETKNKLGTFA SSIFSDLQDR
401: ML
101: IEAKYTSRAA DMYRQTLAKE VAKAMAEETV LPSLSSVATS QPVESSENGF TSESPKESSL KQEAAVVSSP KASQKVVAST FKKPLVSRKS GKTGGLGARK
201: LTTKSKDNLY EQKPEEPVPV IPAASPTNDT SAAGSSFASR FEYFDDEQSG GQSGTRVLSH VAPPKSSNFF NEFGMDSAFP KKSSSSSSKA QVEETDEARK
301: KFSNAKSISS AQFFGNQNRD ADLDSKATLQ KFSGSAAISS SDLFGHGPDD SNIDITASDL INRISFQAQQ DMSSIANLAE ETKNKLGTFA SSIFSDLQDR
401: ML
Arabidopsis Description
AGD9AGD9 [Source:UniProtKB/TrEMBL;Acc:A0A178UAW4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.