Factsheet for Zm00001d034885_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90493	Sorghum	cytosol	95.43	95.43
Zm00001d012827_P002	Maize	cytosol	92.79	91.69
Os03t0854100-01	Rice	cytosol	82.45	83.25
TraesCS4A01G323700.1	Wheat	cytosol, nucleus, peroxisome, plastid	77.88	78.26
TraesCS5D01G554100.1	Wheat	cytosol, nucleus, peroxisome, plastid	77.4	77.78
TraesCS5B01G554600.1	Wheat	cytosol, plastid	76.68	69.05
GSMUA_Achr4P21720_001	Banana	cytosol	67.07	68.72
GSMUA_Achr11P...	Banana	cytosol	66.35	68.66
GSMUA_Achr4P28870_001	Banana	cytosol	65.62	67.57
GSMUA_Achr2P18150_001	Banana	cytosol	65.38	67.33
KRH75607	Soybean	cytosol	64.9	67.0
VIT_02s0012g01330.t01	Wine grape	cytosol	64.42	66.17
Solyc08g005070.2.1	Tomato	cytosol	63.94	66.17
KRH45437	Soybean	endoplasmic reticulum, mitochondrion	63.94	66.0
HORVU5Hr1G123590.1	Barley	cytosol	77.16	65.91
PGSC0003DMT400002955	Potato	cytosol	62.98	64.53
Solyc08g076920.2.1	Tomato	nucleus	62.5	63.11
Zm00001d047020_P002	Maize	cytosol	66.59	62.95
PGSC0003DMT400045159	Potato	cytosol	62.02	62.62
CDX77687	Canola	cytosol	59.62	61.69
CDY44506	Canola	cytosol	58.41	61.36
CDY58500	Canola	cytosol	59.13	61.35
CDX90439	Canola	cytosol	60.34	61.22
Bra024999.1-P	Field mustard	cytosol	53.61	61.1
CDY01499	Canola	cytosol	59.62	60.93
AT4G17890.1	Thale cress	cytosol	60.34	60.77
Bra013265.1-P	Field mustard	cytosol	57.45	60.66
AT5G46750.1	Thale cress	cytosol	58.41	60.45
CDX78809	Canola	cytosol	56.73	60.36
Zm00001d030031_P002	Maize	plastid	67.07	57.76
AT2G35210.1	Thale cress	cytosol	53.85	56.71
CDY59045	Canola	cytosol	53.12	56.23
Bra017330.1-P	Field mustard	cytosol	52.88	55.84
HORVU1Hr1G047800.23	Barley	plastid	22.84	28.11
Zm00001d009353_P001	Maize	cytosol	7.21	24.79
Bra012634.1-P	Field mustard	cytosol	60.58	24.63
Zm00001d007856_P001	Maize	cytosol	13.94	21.32
Zm00001d047793_P001	Maize	extracellular, plasma membrane	21.15	19.43
Zm00001d028656_P001	Maize	mitochondrion	20.91	19.16
Zm00001d015981_P001	Maize	peroxisome	6.97	18.95
Zm00001d004245_P003	Maize	cytosol	8.65	18.75
Zm00001d006602_P001	Maize	cytosol	20.91	17.54
Zm00001d021802_P001	Maize	cytosol	19.71	17.12
Zm00001d049871_P001	Maize	cytosol	5.05	10.99
Zm00001d015278_P001	Maize	mitochondrion	7.93	9.82
Zm00001d051030_P001	Maize	cytosol, plastid	12.5	9.77
Zm00001d016547_P001	Maize	cytosol, plastid	12.5	9.77
Zm00001d046873_P001	Maize	cytosol, plastid	12.5	9.77
Zm00001d051188_P001	Maize	cytosol	2.64	8.33
Zm00001d023982_P001	Maize	cytosol	7.45	7.97
Zm00001d031667_P006	Maize	cytosol	14.9	7.53
Zm00001d021087_P003	Maize	cytosol	14.9	7.41
Zm00001d049872_P001	Maize	cytosol	9.13	6.92
Zm00001d051187_P009	Maize	plastid	9.38	5.53
Zm00001d032879_P001	Maize	extracellular	0.96	1.84
Zm00001d016932_P001	Maize	endoplasmic reticulum	0.72	1.64
Zm00001d031462_P001	Maize	endoplasmic reticulum, extracellular	0.72	1.57

Protein Annotations

EntrezGene:100191606	MapMan:22.3.4.2	Gene3D:3.30.40.160	InterPro:ARFGAP/RecO	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf
UniProt:B4F9F9	EMBL:BT033747	EMBL:BT064519	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488
GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164	InterPro:IPR038508
ProteinID:ONM11673.1	ProteinID:ONM11674.1	ProteinID:ONM11676.1	ProteinID:ONM11678.1	PFAM:PF01412	PRINTS:PR00405
PFscan:PS50115	PANTHER:PTHR23180	PANTHER:PTHR23180:SF381	SMART:SM00105	SUPFAM:SSF57863	UniParc:UPI00017B6111
EnsemblPlantsGene:Zm00001d034885	EnsemblPlants:Zm00001d034885_P002	EnsemblPlants:Zm00001d034885_T002	SEG:seg	:	:

Description

ADP-ribosylation factor GTPase-activating protein AGD10

Coordinates

chr1:-:304665327..304670409

Molecular Weight (calculated)

44898.5 Da

IEP (calculated)

9.733

GRAVY (calculated)

-0.640

Length

416 amino acids

Sequence
(BLAST)

001: MAAAFDAYTD KNAVFRRLKA KPENKMCFDC NAKNPTWASV TYGIFLCLDC SAAHRSLGVH ITFVRSTNLD SWTPDQLKMM AFGGNNRAHA FFKQHGWTDG
101: GKVEAKYTSR AAELYRQMLT KEVAKSATTD NALPSSPVAS EASKPPSDDF PEFKLPDVPA PPAEDLNGKH EPKSPKAAPR SPKAATHPTF ATSVKKPIGA
201: KKVGGKTGGL GVRKLTTKPN ESLYEQKPEE PKPAVPALAA STKKGGQALH SRFEYVENEP SADSRTGGSV SRVSGHVAPP KSSDFFQEYG MGNGFQKKSS
301: NASKTQVEET DEARKKFSNA KAISSSQFFG TQNREEKEAQ LSLQKFAGSS SISSADLFGR NDADNSNLDL SAADLINRIS FQASQDLSSL KDIAGETGKK
401: LTSLASNFIS DLDRIL

Best Arabidopsis Sequence Match ( AT4G17890.1 )
(BLAST)

001: MASSSADNLT DKNIVFRKLK SKSENKVCFD CSAKNPTWAS VTYGIFLCID CSATHRNLGV HISFVRSTNL DSWSPEQLRT MMFGGNNRAQ VFFKQHGWTD
101: GGKIEAKYTS RAADLYRQIL AKEVAKAIAE ETNSGLLSSP VATSQLPEVS NGVSSYSVKE ELPLSKHEAT SATSSPKASN TVVPSTFKKP IGAKRTGKTG
201: GLGARKLTTK PKDNLYEQKP EEVAPVIPAV SSTNNGESKS SAGSSFASRF EYNDDLQSGG QSVGGTQVLN HVAPPKSSSF FSDFGMDSSF PKKSSSNSSK
301: SQVEESDEAR KKFTNAKSIS SAQYFGDQNK NADLESKATL QKFAGSASIS SADFYGHDQD DSNIDITASD LINRLSFQAQ QDLSSLVNIA GETKKKLGTL
401: ASGIFSDIQD RML

Arabidopsis Description

AGD8Probable ADP-ribosylation factor GTPase-activating protein AGD8 [Source:UniProtKB/Swiss-Prot;Acc:Q8H100]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.