Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013265.1-P | Field mustard | cytosol | 94.95 | 95.43 |
| CDX78809 | Canola | cytosol | 93.43 | 94.63 |
| CDX90439 | Canola | cytosol | 89.9 | 86.83 |
| CDY01499 | Canola | cytosol | 88.89 | 86.49 |
| AT4G17890.1 | Thale cress | cytosol | 89.9 | 86.2 |
| CDY58500 | Canola | cytosol | 76.01 | 75.06 |
| CDX77687 | Canola | cytosol | 75.51 | 74.38 |
| KRH45437 | Soybean | endoplasmic reticulum, mitochondrion | 68.94 | 67.74 |
| VIT_02s0012g01330.t01 | Wine grape | cytosol | 68.69 | 67.16 |
| KRH75607 | Soybean | cytosol | 67.93 | 66.75 |
| Solyc08g005070.2.1 | Tomato | cytosol | 65.15 | 64.18 |
| Solyc08g076920.2.1 | Tomato | nucleus | 66.67 | 64.08 |
| GSMUA_Achr4P28870_001 | Banana | cytosol | 65.15 | 63.86 |
| GSMUA_Achr2P18150_001 | Banana | cytosol | 65.15 | 63.86 |
| PGSC0003DMT400045159 | Potato | cytosol | 66.16 | 63.59 |
| PGSC0003DMT400002955 | Potato | cytosol | 65.15 | 63.55 |
| GSMUA_Achr11P... | Banana | cytosol | 64.14 | 63.18 |
| Os10t0574800-01 | Rice | plasma membrane | 63.64 | 61.92 |
| CDY08879 | Canola | cytosol | 49.24 | 61.9 |
| GSMUA_Achr4P21720_001 | Banana | cytosol | 63.13 | 61.58 |
| EER91883 | Sorghum | cytosol | 62.88 | 61.18 |
| TraesCS1A01G193000.1 | Wheat | cytosol | 61.87 | 60.49 |
| TraesCS1D01G196700.1 | Wheat | cytosol | 61.36 | 60.0 |
| Zm00001d034885_P002 | Maize | cytosol | 61.36 | 58.41 |
| CDY59045 | Canola | cytosol | 57.83 | 58.27 |
| Zm00001d012827_P002 | Maize | cytosol | 61.87 | 58.19 |
| EER90493 | Sorghum | cytosol | 60.86 | 57.93 |
| Os03t0854100-01 | Rice | cytosol | 59.85 | 57.52 |
| Zm00001d047020_P002 | Maize | cytosol | 62.63 | 56.36 |
| TraesCS4A01G323700.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 58.08 | 55.56 |
| TraesCS5D01G554100.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 57.58 | 55.07 |
| TraesCS1B01G207900.1 | Wheat | mitochondrion, plastid | 61.87 | 52.02 |
| Zm00001d030031_P002 | Maize | plastid | 62.63 | 51.35 |
| TraesCS5B01G554600.1 | Wheat | cytosol, plastid | 57.32 | 49.13 |
| HORVU5Hr1G123590.1 | Barley | cytosol | 58.08 | 47.23 |
| CDY71222 | Canola | cytosol | 9.6 | 39.58 |
| HORVU1Hr1G047800.23 | Barley | plastid | 20.96 | 24.56 |
| CDY18435 | Canola | cytosol | 22.73 | 21.33 |
| CDY07784 | Canola | mitochondrion | 22.73 | 20.79 |
| CDY69342 | Canola | mitochondrion | 22.73 | 20.55 |
| CDX95838 | Canola | cytosol | 13.13 | 20.47 |
| CDX74953 | Canola | cytosol | 23.23 | 20.35 |
| CDX79739 | Canola | mitochondrion | 22.98 | 20.09 |
| CDX92147 | Canola | cytosol | 12.63 | 19.68 |
| CDY30849 | Canola | cytosol | 22.22 | 19.64 |
| CDX76193 | Canola | cytosol | 22.22 | 19.51 |
| CDX73533 | Canola | cytosol | 21.72 | 19.28 |
| CDX78196 | Canola | cytosol | 21.46 | 19.1 |
| CDY43044 | Canola | cytosol | 19.7 | 16.32 |
| CDY43831 | Canola | cytosol | 19.7 | 16.18 |
| CDY63834 | Canola | cytosol | 19.19 | 16.03 |
| CDY52243 | Canola | cytosol | 18.69 | 15.71 |
| CDY64205 | Canola | endoplasmic reticulum | 18.69 | 15.01 |
| CDY28774 | Canola | endoplasmic reticulum, plasma membrane | 18.18 | 14.6 |
| CDY53619 | Canola | cytosol | 8.59 | 10.09 |
| CDY16083 | Canola | cytosol | 5.56 | 9.32 |
| CDY23645 | Canola | cytosol | 3.54 | 8.64 |
| CDX86943 | Canola | cytosol | 15.15 | 8.43 |
| CDY26647 | Canola | plastid | 3.79 | 8.29 |
| CDY09784 | Canola | cytosol | 15.91 | 7.89 |
| CDY00242 | Canola | cytosol | 15.4 | 7.75 |
| CDX69650 | Canola | cytosol | 16.16 | 7.75 |
| CDX97917 | Canola | cytosol | 14.9 | 7.67 |
| CDX78515 | Canola | cytosol | 15.91 | 7.58 |
| CDY19326 | Canola | cytosol | 14.65 | 7.54 |
| CDY30689 | Canola | cytosol | 15.4 | 7.08 |
| CDY40502 | Canola | cytosol | 13.38 | 6.95 |
| CDY54764 | Canola | cytosol | 12.63 | 6.56 |
| CDX70496 | Canola | cytosol | 7.58 | 5.42 |
| CDX86944 | Canola | cytosol | 0.51 | 1.53 |
Protein Annotations
| MapMan:22.3.4.2 | Gene3D:3.30.40.160 | GO:A0A078I3U0 | UniProt:A0A078I3U0 | InterPro:ARFGAP/RecO | InterPro:ArfGAP_dom |
| InterPro:ArfGAP_dom_sf | EnsemblPlants:CDY44506 | ProteinID:CDY44506 | ProteinID:CDY44506.1 | GO:GO:0003674 | GO:GO:0005096 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043547 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00080265001 |
| InterPro:IPR001164 | InterPro:IPR038508 | PFAM:PF01412 | PRINTS:PR00405 | PFscan:PS50115 | PANTHER:PTHR23180 |
| PANTHER:PTHR23180:SF381 | SMART:SM00105 | SUPFAM:SSF57863 | UniParc:UPI0004EEA2FF | SEG:seg | : |
Description
BnaC01g10430DBnaC01g10430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3U0]
Coordinates
chrLK032592:-:130745..133345
Molecular Weight (calculated)
42674.4 Da
IEP (calculated)
8.661
GRAVY (calculated)
-0.560
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSDNLTDK NIVFRKLKSK SENKVCFDCS AKNPTWASVT YGVFLCIDCS ATHRSLGVHI SFVRSTNLDS WSPEQLRTMM FGGNNRAQVF FKQHGWTDGG
101: KIEAKYTSRA ADLYRQILAK EVAKAISQED TANNALPESP VAAEASNGLS SCSVEEHEAT SSPKASNTAV PSTFKKPIGA KRMGKTGGLG ARKLTTKPTG
201: NLYEQKPEEV APVIPPAAKS SAGSSSSYAS RFEYNDDFQS GGQSVGGTQV LSHVAPPKSS SFFSDFGMDS SYPRKPSSNS SKSQVEESDE ARKKFTNAKS
301: ISSAQYFGDQ NKNADLESKA TLQKFSGSAS ISSADFFGHG QDDYSNVDIT ATDLINRLSF QAQQDISSVM NIAGETKKKL GTFASGIFSD LQDRML
101: KIEAKYTSRA ADLYRQILAK EVAKAISQED TANNALPESP VAAEASNGLS SCSVEEHEAT SSPKASNTAV PSTFKKPIGA KRMGKTGGLG ARKLTTKPTG
201: NLYEQKPEEV APVIPPAAKS SAGSSSSYAS RFEYNDDFQS GGQSVGGTQV LSHVAPPKSS SFFSDFGMDS SYPRKPSSNS SKSQVEESDE ARKKFTNAKS
301: ISSAQYFGDQ NKNADLESKA TLQKFSGSAS ISSADFFGHG QDDYSNVDIT ATDLINRLSF QAQQDISSVM NIAGETKKKL GTFASGIFSD LQDRML
001: MASSSADNLT DKNIVFRKLK SKSENKVCFD CSAKNPTWAS VTYGIFLCID CSATHRNLGV HISFVRSTNL DSWSPEQLRT MMFGGNNRAQ VFFKQHGWTD
101: GGKIEAKYTS RAADLYRQIL AKEVAKAIAE ETNSGLLSSP VATSQLPEVS NGVSSYSVKE ELPLSKHEAT SATSSPKASN TVVPSTFKKP IGAKRTGKTG
201: GLGARKLTTK PKDNLYEQKP EEVAPVIPAV SSTNNGESKS SAGSSFASRF EYNDDLQSGG QSVGGTQVLN HVAPPKSSSF FSDFGMDSSF PKKSSSNSSK
301: SQVEESDEAR KKFTNAKSIS SAQYFGDQNK NADLESKATL QKFAGSASIS SADFYGHDQD DSNIDITASD LINRLSFQAQ QDLSSLVNIA GETKKKLGTL
401: ASGIFSDIQD RML
101: GGKIEAKYTS RAADLYRQIL AKEVAKAIAE ETNSGLLSSP VATSQLPEVS NGVSSYSVKE ELPLSKHEAT SATSSPKASN TVVPSTFKKP IGAKRTGKTG
201: GLGARKLTTK PKDNLYEQKP EEVAPVIPAV SSTNNGESKS SAGSSFASRF EYNDDLQSGG QSVGGTQVLN HVAPPKSSSF FSDFGMDSSF PKKSSSNSSK
301: SQVEESDEAR KKFTNAKSIS SAQYFGDQNK NADLESKATL QKFAGSASIS SADFYGHDQD DSNIDITASD LINRLSFQAQ QDLSSLVNIA GETKKKLGTL
401: ASGIFSDIQD RML
Arabidopsis Description
AGD8Probable ADP-ribosylation factor GTPase-activating protein AGD8 [Source:UniProtKB/Swiss-Prot;Acc:Q8H100]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.