Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017330.1-P | Field mustard | cytosol | 98.73 | 98.48 |
| AT2G35210.1 | Thale cress | cytosol | 82.95 | 82.53 |
| VIT_02s0012g01330.t01 | Wine grape | cytosol | 64.89 | 62.96 |
| Solyc08g005070.2.1 | Tomato | cytosol | 62.34 | 60.95 |
| PGSC0003DMT400002955 | Potato | cytosol | 62.34 | 60.34 |
| KRH75607 | Soybean | cytosol | 61.83 | 60.3 |
| Solyc08g076920.2.1 | Tomato | nucleus | 63.1 | 60.19 |
| KRH45437 | Soybean | endoplasmic reticulum, mitochondrion | 61.58 | 60.05 |
| CDY58500 | Canola | cytosol | 60.56 | 59.35 |
| PGSC0003DMT400045159 | Potato | cytosol | 61.83 | 58.98 |
| GSMUA_Achr4P21720_001 | Banana | cytosol | 60.81 | 58.87 |
| CDX90439 | Canola | cytosol | 61.32 | 58.78 |
| CDX77687 | Canola | cytosol | 60.05 | 58.71 |
| GSMUA_Achr11P... | Banana | cytosol | 59.54 | 58.21 |
| GSMUA_Achr2P18150_001 | Banana | cytosol | 59.8 | 58.17 |
| GSMUA_Achr4P28870_001 | Banana | cytosol | 59.8 | 58.17 |
| CDY01499 | Canola | cytosol | 60.05 | 57.99 |
| CDY44506 | Canola | cytosol | 58.27 | 57.83 |
| CDX78809 | Canola | cytosol | 57.25 | 57.54 |
| EER91883 | Sorghum | cytosol | 57.51 | 55.53 |
| Os10t0574800-01 | Rice | plasma membrane | 57.51 | 55.53 |
| Os03t0854100-01 | Rice | cytosol | 58.02 | 55.34 |
| TraesCS5D01G554100.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 58.02 | 55.07 |
| TraesCS4A01G323700.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 58.02 | 55.07 |
| TraesCS1A01G193000.1 | Wheat | cytosol | 56.49 | 54.81 |
| TraesCS1D01G196700.1 | Wheat | cytosol | 56.23 | 54.57 |
| EER90493 | Sorghum | cytosol | 57.51 | 54.33 |
| Zm00001d012827_P002 | Maize | cytosol | 57.0 | 53.21 |
| Zm00001d034885_P002 | Maize | cytosol | 56.23 | 53.12 |
| Zm00001d047020_P002 | Maize | cytosol | 57.76 | 51.59 |
| TraesCS5B01G554600.1 | Wheat | cytosol, plastid | 58.27 | 49.57 |
| TraesCS1B01G207900.1 | Wheat | mitochondrion, plastid | 56.23 | 46.92 |
| Zm00001d030031_P002 | Maize | plastid | 57.51 | 46.79 |
| HORVU5Hr1G123590.1 | Barley | cytosol | 57.76 | 46.61 |
| CDY08879 | Canola | cytosol | 32.06 | 40.0 |
| CDY71222 | Canola | cytosol | 9.67 | 39.58 |
| HORVU1Hr1G047800.23 | Barley | plastid | 20.61 | 23.96 |
| CDX92147 | Canola | cytosol | 14.25 | 22.05 |
| CDX95838 | Canola | cytosol | 13.99 | 21.65 |
| CDY18435 | Canola | cytosol | 20.1 | 18.72 |
| CDX78196 | Canola | cytosol | 20.87 | 18.43 |
| CDX73533 | Canola | cytosol | 20.36 | 17.94 |
| CDY07784 | Canola | mitochondrion | 19.59 | 17.78 |
| CDX76193 | Canola | cytosol | 20.1 | 17.52 |
| CDY30849 | Canola | cytosol | 19.85 | 17.41 |
| CDY69342 | Canola | mitochondrion | 19.08 | 17.12 |
| CDX74953 | Canola | cytosol | 19.34 | 16.81 |
| CDX79739 | Canola | mitochondrion | 19.34 | 16.78 |
| CDY52243 | Canola | cytosol | 17.3 | 14.44 |
| CDY43044 | Canola | cytosol | 17.56 | 14.44 |
| CDY63834 | Canola | cytosol | 17.05 | 14.13 |
| CDY43831 | Canola | cytosol | 17.3 | 14.11 |
| CDY28774 | Canola | endoplasmic reticulum, plasma membrane | 16.79 | 13.39 |
| CDY64205 | Canola | endoplasmic reticulum | 16.29 | 12.98 |
| CDY23645 | Canola | cytosol | 4.07 | 9.88 |
| CDY16083 | Canola | cytosol | 5.09 | 8.47 |
| CDY53619 | Canola | cytosol | 6.87 | 8.01 |
| CDX86943 | Canola | cytosol | 13.74 | 7.58 |
| CDY09784 | Canola | cytosol | 14.25 | 7.02 |
| CDY00242 | Canola | cytosol | 13.99 | 6.99 |
| CDX78515 | Canola | cytosol | 14.5 | 6.86 |
| CDX69650 | Canola | cytosol | 14.25 | 6.78 |
| CDX97917 | Canola | cytosol | 12.72 | 6.5 |
| CDY30689 | Canola | cytosol | 14.25 | 6.5 |
| CDY40502 | Canola | cytosol | 12.47 | 6.42 |
| CDY19326 | Canola | cytosol | 12.47 | 6.37 |
| CDY26647 | Canola | plastid | 2.8 | 6.08 |
| CDY54764 | Canola | cytosol | 10.94 | 5.64 |
| CDX70496 | Canola | cytosol | 7.63 | 5.42 |
| CDX86944 | Canola | cytosol | 0.51 | 1.53 |
Protein Annotations
| MapMan:22.3.4.2 | Gene3D:3.30.40.160 | GO:A0A078J4Q7 | UniProt:A0A078J4Q7 | InterPro:ARFGAP/RecO | InterPro:ArfGAP_dom |
| InterPro:ArfGAP_dom_sf | EnsemblPlants:CDY59045 | ProteinID:CDY59045 | ProteinID:CDY59045.1 | ncoils:Coil | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0005096 | GO:GO:0005488 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009555 |
| GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0030234 | GO:GO:0043547 | GO:GO:0046872 |
| EnsemblPlantsGene:GSBRNA2T00025481001 | InterPro:IPR001164 | InterPro:IPR038508 | PFAM:PF01412 | PRINTS:PR00405 | PFscan:PS50115 |
| PANTHER:PTHR23180 | PANTHER:PTHR23180:SF381 | SMART:SM00105 | SUPFAM:SSF57863 | UniParc:UPI0004EE9106 | SEG:seg |
Description
BnaAnng15700DADP-ribosylation factor GTPase-activating protein AGD10 [Source:Projected from Arabidopsis thaliana (AT2G35210) UniProtKB/Swiss-Prot;Acc:O82171]
Coordinates
chrLK033720:-:41568..43778
Molecular Weight (calculated)
42845.1 Da
IEP (calculated)
9.583
GRAVY (calculated)
-0.625
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MASENLNDKV AVFKKLKSKS DNKICFDCNA KSPTWASVTY GIFLCIDCSA VHRSLGVHIS FVRSTNLDSW SPEQLKMMVY GGNSRAHVFF KQHGWSGEGK
101: ADTKYTSRAA ESYKQTLARE VAKSNAEELL DLPPPDSTTK QVPNGLSTIK TTEEAPKESI NNNTKVPVSP RVSKSVKKPL GAKKTGKTGG LGARKLTTKS
201: SETLYDQKPE ESVVVQAAYS SANSSPSAKS ARSSFSSRFD YADGVQTREQ YMSNGPQVFG HVAPPKSTGF FEEFEMNGFQ KKPITSSSRI QETDEARKKF
301: SNAKSISSAQ YFGNENNAMD LEAKSSLKKF SGSTAISSAE LFGDDDGDFP LDLSAGDLIN RLSLQAQQDM SSLKNMAEET KKKLSSVASS LWV
101: ADTKYTSRAA ESYKQTLARE VAKSNAEELL DLPPPDSTTK QVPNGLSTIK TTEEAPKESI NNNTKVPVSP RVSKSVKKPL GAKKTGKTGG LGARKLTTKS
201: SETLYDQKPE ESVVVQAAYS SANSSPSAKS ARSSFSSRFD YADGVQTREQ YMSNGPQVFG HVAPPKSTGF FEEFEMNGFQ KKPITSSSRI QETDEARKKF
301: SNAKSISSAQ YFGNENNAMD LEAKSSLKKF SGSTAISSAE LFGDDDGDFP LDLSAGDLIN RLSLQAQQDM SSLKNMAEET KKKLSSVASS LWV
001: MASENLNDKI SVFKKLKAKS DNKICFDCNA KNPTWASVTY GIFLCIDCSA VHRSLGVHIS FVRSTNLDSW SSEQLKMMIY GGNNRAQVFF KQYGWSDGGK
101: TEAKYTSRAA DLYKQILAKE VAKSKAEEEL DLPPSPPDST QVPNGLSSIK TSEALKESNT LKQQEKPDVV PVSPRISRSV KKPLGAKKTG KTGGLGARKL
201: TTKSSGTLYD QKPEESVIIQ ATSPVSAKSA RSSFSSRFDY ADNVQNREDY MSPQVVSHVA PPKSSGFFEE ELEMNGGRFQ KKPITSSSKL QIQETDEARK
301: KFTNAKSISS AQYFGNDNNS ADLEAKSSLK KFSGSSAISS ADLFGDGDGD FPLDLTAGDL LNRLSLQAQQ DISSLKNMAE ETKKKLGSVA SSLWV
101: TEAKYTSRAA DLYKQILAKE VAKSKAEEEL DLPPSPPDST QVPNGLSSIK TSEALKESNT LKQQEKPDVV PVSPRISRSV KKPLGAKKTG KTGGLGARKL
201: TTKSSGTLYD QKPEESVIIQ ATSPVSAKSA RSSFSSRFDY ADNVQNREDY MSPQVVSHVA PPKSSGFFEE ELEMNGGRFQ KKPITSSSKL QIQETDEARK
301: KFTNAKSISS AQYFGNDNNS ADLEAKSSLK KFSGSSAISS ADLFGDGDGD FPLDLTAGDL LNRLSLQAQQ DISSLKNMAE ETKKKLGSVA SSLWV
Arabidopsis Description
AGD10RPA [Source:UniProtKB/TrEMBL;Acc:A0A178VQN0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.