Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92147 | Canola | cytosol | 78.12 | 29.53 |
| CDX95838 | Canola | cytosol | 77.08 | 29.13 |
| CDY63834 | Canola | cytosol | 92.71 | 18.78 |
| CDY52243 | Canola | cytosol | 91.67 | 18.68 |
| CDY43044 | Canola | cytosol | 90.62 | 18.2 |
| CDY43831 | Canola | cytosol | 90.62 | 18.05 |
| TraesCS2B01G230900.1 | Wheat | cytosol | 86.46 | 17.47 |
| TraesCS2A01G203600.1 | Wheat | cytosol | 86.46 | 17.47 |
| GSMUA_Achr4P23780_001 | Banana | cytosol | 86.46 | 17.44 |
| Os07t0563800-02 | Rice | cytosol | 86.46 | 17.44 |
| TraesCS2D01G212100.1 | Wheat | cytosol | 85.42 | 17.26 |
| GSMUA_Achr1P08800_001 | Banana | cytosol | 85.42 | 17.15 |
| Zm00001d021802_P001 | Maize | cytosol | 85.42 | 17.12 |
| EER99548 | Sorghum | cytosol | 83.33 | 16.91 |
| PGSC0003DMT400012918 | Potato | cytosol | 81.25 | 16.77 |
| Solyc03g006610.2.1 | Tomato | cytosol | 80.21 | 16.52 |
| Zm00001d006602_P001 | Maize | cytosol | 84.38 | 16.33 |
| VIT_00s0404g00040.t01 | Wine grape | cytosol | 85.42 | 16.17 |
| CDY28774 | Canola | endoplasmic reticulum, plasma membrane | 76.04 | 14.81 |
| CDY64205 | Canola | endoplasmic reticulum | 76.04 | 14.81 |
| CDY59045 | Canola | cytosol | 39.58 | 9.67 |
| CDY44506 | Canola | cytosol | 39.58 | 9.6 |
| CDX78809 | Canola | cytosol | 38.54 | 9.46 |
| CDX90439 | Canola | cytosol | 38.54 | 9.02 |
| CDY01499 | Canola | cytosol | 37.5 | 8.85 |
| CDY18435 | Canola | cytosol | 38.54 | 8.77 |
| CDY58500 | Canola | cytosol | 36.46 | 8.73 |
| CDX77687 | Canola | cytosol | 36.46 | 8.71 |
| CDY07784 | Canola | mitochondrion | 38.54 | 8.55 |
| CDY30849 | Canola | cytosol | 38.54 | 8.26 |
| CDY69342 | Canola | mitochondrion | 37.5 | 8.22 |
| CDX76193 | Canola | cytosol | 38.54 | 8.2 |
| CDX79739 | Canola | mitochondrion | 38.54 | 8.17 |
| CDX78196 | Canola | cytosol | 37.5 | 8.09 |
| CDX73533 | Canola | cytosol | 37.5 | 8.07 |
| CDX74953 | Canola | cytosol | 37.5 | 7.96 |
| CDX70496 | Canola | cytosol | 36.46 | 6.33 |
| CDX86943 | Canola | cytosol | 46.88 | 6.32 |
| CDY09784 | Canola | cytosol | 48.96 | 5.89 |
| CDY00242 | Canola | cytosol | 46.88 | 5.72 |
| CDX69650 | Canola | cytosol | 48.96 | 5.69 |
| CDX78515 | Canola | cytosol | 48.96 | 5.66 |
| CDX97917 | Canola | cytosol | 44.79 | 5.59 |
| CDY19326 | Canola | cytosol | 44.79 | 5.59 |
| CDY30689 | Canola | cytosol | 48.96 | 5.45 |
| CDY40502 | Canola | cytosol | 37.5 | 4.72 |
| CDY54764 | Canola | cytosol | 35.42 | 4.46 |
| CDY53619 | Canola | cytosol | 15.62 | 4.45 |
| CDY23645 | Canola | cytosol | 3.12 | 1.85 |
| CDX86944 | Canola | cytosol | 2.08 | 1.53 |
| CDY08879 | Canola | cytosol | 1.04 | 0.32 |
| CDY26647 | Canola | plastid | 0.0 | 0.0 |
| CDY16083 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:22.3.4.2 | Gene3D:3.30.40.160 | GO:A0A078JZY4 | UniProt:A0A078JZY4 | InterPro:ARFGAP/RecO | InterPro:ArfGAP_dom |
| InterPro:ArfGAP_dom_sf | EnsemblPlants:CDY71222 | ProteinID:CDY71222 | ProteinID:CDY71222.1 | GO:GO:0003674 | GO:GO:0005096 |
| GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043547 | EnsemblPlantsGene:GSBRNA2T00012139001 | InterPro:IPR001164 | InterPro:IPR038508 |
| PFAM:PF01412 | PRINTS:PR00405 | PFscan:PS50115 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF160 | SMART:SM00105 |
| SUPFAM:SSF57863 | UniParc:UPI0004EDD0AB | : | : | : | : |
Description
BnaCnng71910DBnaCnng71910D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JZY4]
Coordinates
chrLK044955:-:55..1633
Molecular Weight (calculated)
10956.5 Da
IEP (calculated)
9.990
GRAVY (calculated)
-0.233
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MNEKANVSKE LNARHRKILE GLLKHPENRE CADCKTKGPR WASVNLGIFI CMQCSGIHRS LGVHISKVRS ATLDTWLPEQ VAFIQCKCLW KLIISR
001: MNRKASVSKE LNAKHSKILE ALLKHPDNRE CADCRSKAPR WASVNLGIFI CMQCSGIHRS LGVHISQVRS ITLDTWLPDQ VAFMKSTGNA KGNEYWESEL
101: PQHFERSSSD TFIRAKYSEK RWVSPGAIQP APIVSQLSCK VSHLVESGYK PETPKKARTL SLDEEILLHH VLQVTPPETR TRAGSVDMKE NVYVVPLPEF
201: KKPNQKNENF SSEVNQNRRT TIAPPSSWAT FD
101: PQHFERSSSD TFIRAKYSEK RWVSPGAIQP APIVSQLSCK VSHLVESGYK PETPKKARTL SLDEEILLHH VLQVTPPETR TRAGSVDMKE NVYVVPLPEF
201: KKPNQKNENF SSEVNQNRRT TIAPPSSWAT FD
Arabidopsis Description
AGD15ARF-GAP domain 15 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR18]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.