CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029295.1-P	Field mustard	cytosol	97.68	97.68
AT5G61980.1	Thale cress	cytosol	90.6	94.32
CDY00242	Canola	cytosol	81.21	88.95
CDX86943	Canola	cytosol	72.85	88.2
CDX86944	Canola	cytosol	11.02	72.52
CDX70496	Canola	cytosol	46.29	72.15
Zm00001d049872_P001	Maize	cytosol	43.5	68.31
CDY09784	Canola	cytosol	61.02	65.91
GSMUA_Achr11P...	Banana	cytosol	61.25	64.71
CDX69650	Canola	cytosol	61.6	64.29
CDX78515	Canola	cytosol	61.95	64.26
VIT_17s0000g00310.t01	Wine grape	cytosol	60.79	63.36
GSMUA_Achr4P00060_001	Banana	cytosol	60.56	62.37
TraesCS5A01G293000.1	Wheat	cytosol	59.51	61.73
TraesCS5B01G292200.1	Wheat	cytosol	59.51	61.51
Os09t0510700-01	Rice	cytosol	59.51	61.36
EER99172	Sorghum	cytosol	59.4	61.24
TraesCS5D01G300300.2	Wheat	cytosol	59.51	61.07
TraesCS7A01G263800.2	Wheat	cytosol	58.24	61.0
Zm00001d021087_P003	Maize	cytosol	59.16	60.93
HORVU7Hr1G055220.21	Barley	cytosol	58.47	60.65
HORVU5Hr1G077570.15	Barley	cytosol	58.58	60.33
OQU80812	Sorghum	cytosol	57.66	60.32
Zm00001d031667_P006	Maize	cytosol	57.54	60.27
Os08t0537600-01	Rice	plasma membrane	58.0	60.17
Solyc03g118260.1.1	Tomato	cytosol	55.8	60.12
Zm00001d009353_P001	Maize	cytosol	8.24	58.68
TraesCS7D01G264700.1	Wheat	endoplasmic reticulum	57.54	58.56
TraesCS7B01G161800.1	Wheat	endoplasmic reticulum	57.54	58.56
PGSC0003DMT400036762	Potato	cytosol	38.17	56.34
GSMUA_Achr7P22530_001	Banana	endoplasmic reticulum	48.03	55.95
Zm00001d015981_P001	Maize	peroxisome	9.63	54.25
CDY71222	Canola	cytosol	5.45	48.96
Zm00001d004245_P003	Maize	cytosol	10.67	47.92
Zm00001d015278_P001	Maize	mitochondrion	18.45	47.32
CDY53619	Canola	cytosol	17.17	43.92
CDX97917	Canola	cytosol	38.4	43.04
CDY19326	Canola	cytosol	38.05	42.65
CDY40502	Canola	cytosol	37.12	41.94
CDY54764	Canola	cytosol	36.43	41.21
Zm00001d049871_P001	Maize	cytosol	9.05	40.84
Zm00001d023982_P001	Maize	cytosol	14.73	32.65
CDX95838	Canola	cytosol	7.77	26.38
CDX92147	Canola	cytosol	7.42	25.2
CDY63834	Canola	cytosol	9.86	17.93
CDY52243	Canola	cytosol	9.63	17.62
CDY43044	Canola	cytosol	9.74	17.57
CDY43831	Canola	cytosol	9.63	17.22
CDY58500	Canola	cytosol	7.31	15.71
CDX77687	Canola	cytosol	7.31	15.67
CDY64205	Canola	endoplasmic reticulum	8.93	15.62
CDY28774	Canola	endoplasmic reticulum, plasma membrane	8.93	15.62
CDY44506	Canola	cytosol	7.08	15.4
CDY18435	Canola	cytosol	7.54	15.4
CDX78809	Canola	cytosol	6.96	15.35
CDY07784	Canola	mitochondrion	7.42	14.78
CDX90439	Canola	cytosol	6.96	14.63
CDY01499	Canola	cytosol	6.84	14.5
CDY59045	Canola	cytosol	6.5	14.25
CDX76193	Canola	cytosol	7.42	14.19
CDY30849	Canola	cytosol	7.31	14.06
CDX74953	Canola	cytosol	7.31	13.94
CDX78196	Canola	cytosol	7.19	13.93
CDY69342	Canola	mitochondrion	7.08	13.93
CDX79739	Canola	mitochondrion	7.31	13.91
CDX73533	Canola	cytosol	7.19	13.9
CDY23645	Canola	cytosol	1.62	8.64
CDY16083	Canola	cytosol	2.32	8.47
CDY26647	Canola	plastid	1.62	7.73
CDY08879	Canola	cytosol	2.32	6.35

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:1.25.40.20	MapMan:22.3.4.1	Gene3D:3.30.40.160	GO:A0A078GZT0	UniProt:A0A078GZT0
InterPro:AGD1/2/3/4_BAR_plant	InterPro:AH/BAR_dom_sf	InterPro:ARFGAP/RecO	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	InterPro:BAR_dom	EnsemblPlants:CDY30689	ProteinID:CDY30689	ProteinID:CDY30689.1
ncoils:Coil	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0030234	GO:GO:0043547
GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00046020001	InterPro:IPR001164	InterPro:IPR001849	InterPro:IPR002110	InterPro:IPR004148
InterPro:IPR020683	InterPro:IPR027267	InterPro:IPR036770	InterPro:IPR038508	PFAM:PF00169	PFAM:PF01412
PFAM:PF12796	PFAM:PF16746	InterPro:PH_domain	PRINTS:PR00405	PFscan:PS50003	PFscan:PS50088
PFscan:PS50115	PFscan:PS50297	PANTHER:PTHR23180	PANTHER:PTHR23180:SF373	SMART:SM00105	SMART:SM00233
SMART:SM00248	SMART:SM00721	SUPFAM:SSF103657	SUPFAM:SSF48403	SUPFAM:SSF50729	SUPFAM:SSF57863
UniParc:UPI0004EEC203	SEG:seg	:	:	:	:

Description

BnaA02g33110DBnaA02g33110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZT0]

Coordinates

chrLK032258:+:29185..34910

Molecular Weight (calculated)

97880.3 Da

IEP (calculated)

8.073

GRAVY (calculated)

-0.498

Length

862 amino acids

Sequence
(BLAST)

001: MHFAKLDDSP MFRQQMQSME ESAELLRMRC LRFYKGCRKY TEGLGEGYDS DIGFANALES FGGGHNDPLC VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HMLNDRLLQF VNVDVQEVKE ARKRFDKASI IYDQAREKYL SLRKSTRLDV AATIEEDLHS ARTTFEQARF HLVSALSNAE AKKRFEFLEA VSGTMDAHLR
201: FFKQLERSFL GLRVQLVGYS VSLVQHKYYR INPKDSFFQG YELLHQMEPF INQVLAYAHQ SKECANYEMA SLNEKMQEYQ RQVDRETRNS CGSPTGDGMR
301: HNSRNSQKVI EAVMQSAAKG KVQTIRQGYL SKRSSNLRGD WKRRFFILDS RGMLYYYRKP WNWSSNGSRS VVHRNMTSEN SPGLLSRWLS SHYHGGVHEE
401: KPVARHTVNL LTSTIKVDAD QTDLRFCFRI ISPTKVYTLQ AENAQDQMDW IEKITGVIAS LLSFQTPERA IMHLSTVDGD TFSASDSGSL ADPYDFEQAE
501: GRDSIVENPM TGGNRSRFSG CLQQHDMMKT EKPIDVLTRV LGNEKCADCG APEPDWASLN LGVLICIECS GIHRNLGVHI SKVRSLTLDV KVWEPSVLTL
601: FQSLGNVYVN SVWEELLNSE SRSSSASRSS GTPKADRPRK FLVRKPGFSD PISVKELFIH AKYSERIFVR KATDSQHFQA VFQEIWENVR ANDKKSVYKH
701: IVCSEADVNA LRGQASYTVS LPLAKMMQLD AKEETLEAKF KSIDKEFQEK PEGTSRRDSE SMVREETSND CSLLHLACLS ADIGMVELLL QYGAKVNATD
801: SKGRTPLHHC IISRRYAIAR LLLMRGGDPN AVDKDNNTPV KYASETDLND SELIALLTDS KR

Best Arabidopsis Sequence Match ( AT5G61980.1 )
(BLAST)

001: MHFAKLDDSP MFRQQMQSME ESAELLRLRC LRFYKGCRKY TEGLGEGYDA DIGFVNALES FGGGHNDPVC VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HMLSDRLLQF VNGDVHEVKE ARKRFDKATI TYDQAREKYL SLRKSTRLDV AATIEEDLHS ARTTFEQARF HLVSALSNAE SKKRFEFLEA VSGTMDAHLR
201: FFKQGYELLH QMEPFINQVL AYAHQSRECA NYEMASLNER MQEYQRQVDR ETRNSCVSPT GDGMRHNSRN SQKVIEAVMQ SAAKGKVQTI RQGYLSKRSS
301: NLRGDWKRRF FILDSRGMLY YYRKPWNWSS GNGSRSVVHR NMASENSPGL LSRWLSSHYH GGVHDEKPVA RHTVNLLTST IKVDADQTDL RFCFRIISPT
401: KVYTLQAENA QDQMDWIEKI TGVIASLLSF QTPERAIMRL STVDGGDTFS ASDSGSLADP YDIEQAESGE STVEHPMTGG NRSRFSGCLQ QHDMVKTEKP
501: IDVLTRVLGN ERCADCGAPE PDWASLNLGV LICIECSGIH RNLGVHISKV RSLTLDVKVW EPSVLTLFQS LGNVYVNSVW EELLNSESRT SSASRSSGTP
601: KSDRPRKLLV RKPGFNDPIS VKELFIHAKY SERIFVRKAI DSQHFQAVFQ EIWENVRAND KKSVYRHIVC SEADVNALRG QASYTVSLPL SKMMQMEETL
701: EAKFKSIEEE FQENPAGYSN SRGDGESMVR EETSNDCSLL HLACLSADIG MVELLLQYGA KINATDSKGR TPLHHCIISR RYAIARLLLM RGGDPNAVDK
801: DSNIPVKYAS QTDLNDSELI ALLTDSKR

Arabidopsis Description

AGD1ADP-ribosylation factor GTPase-activating protein AGD1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIT8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.