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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G385400.2
TraesCS1B01G411700.3
TraesCS1D01G393000.2
TraesCS4A01G435000.1
TraesCS5A01G056700.2
TraesCS5A01G293000.1
TraesCS5A01G377600.1
TraesCS5B01G060100.2
TraesCS5B01G292200.1
TraesCS5B01G381200.1
TraesCS5D01G067900.2
TraesCS5D01G300300.2
TraesCS5D01G387600.1
TraesCS6B01G443600.1
TraesCS6D01G385300.1
TraesCS7A01G049200.1
TraesCS7A01G263800.2
TraesCS7B01G161800.1
TraesCS7D01G044300.1
TraesCS7D01G264700.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G13300.1 TraesCS5A01G056700.2 AT3G63300.1 19363154
AT5G13300.1 TraesCS5A01G377600.1 AT3G63300.1 19363154
AT5G13300.1 TraesCS5B01G060100.2 AT3G63300.1 19363154
AT5G13300.1 TraesCS5B01G381200.1 AT3G63300.1 19363154
AT5G13300.1 TraesCS5D01G067900.2 AT3G63300.1 19363154
AT5G13300.1 TraesCS5D01G387600.1 AT3G63300.1 19363154
AT5G13300.1 TraesCS5A01G293000.1 AT5G13300.1 15743878
AT5G13300.1 TraesCS5B01G292200.1 AT5G13300.1 15743878
AT5G13300.1 TraesCS5D01G300300.2 AT5G13300.1 15743878
AT5G13300.1 TraesCS7A01G263800.2 AT5G13300.1 15743878
AT5G13300.1 TraesCS7B01G161800.1 AT5G13300.1 15743878
AT5G13300.1 TraesCS7D01G264700.1 AT5G13300.1 15743878
AT5G13300.1 TraesCS4A01G435000.1 AT5G26980.1 15743878
AT5G13300.1 TraesCS7A01G049200.1 AT5G26980.1 15743878
AT5G13300.1 TraesCS7D01G044300.1 AT5G26980.1 15743878
AT5G13300.1 TraesCS1A01G385400.2 AT5G42080.1 15923323
AT5G13300.1 TraesCS1B01G411700.3 AT5G42080.1 15923323
AT5G13300.1 TraesCS1D01G393000.2 AT5G42080.1 15923323
AT5G13300.1 TraesCS6B01G443600.1 AT5G42080.1 15923323
AT5G13300.1 TraesCS6D01G385300.1 AT5G42080.1 15923323
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G055220.21 Barley cytosol 97.45 96.51
TraesCS7D01G264700.1 Wheat endoplasmic reticulum 97.93 95.16
TraesCS7B01G161800.1 Wheat endoplasmic reticulum 97.93 95.16
Zm00001d049872_P001 Maize cytosol 57.11 85.61
OQU80812 Sorghum cytosol 83.23 83.13
Zm00001d031667_P006 Maize cytosol 82.5 82.5
Os08t0537600-01 Rice plasma membrane 81.65 80.87
Zm00001d009353_P001 Maize cytosol 11.66 79.34
Zm00001d015981_P001 Maize peroxisome 14.46 77.78
TraesCS5A01G293000.1 Wheat cytosol 75.82 75.09
CDX70496 Canola cytosol 50.18 74.68
Solyc12g042180.1.1 Tomato cytosol 20.17 74.11
GSMUA_Achr11P... Banana cytosol 72.3 72.92
Zm00001d049871_P001 Maize cytosol 16.65 71.73
GSMUA_Achr4P00060_001 Banana cytosol 71.57 70.37
Zm00001d004245_P003 Maize cytosol 16.4 70.31
KRH45201 Soybean cytosol 67.31 67.31
VIT_01s0150g00030.t01 Wine grape cytosol 67.92 67.19
CDY09784 Canola cytosol 65.13 67.17
PGSC0003DMT400005756 Potato cytosol 66.59 67.07
Solyc05g023750.2.1 Tomato cytosol 66.1 66.59
AT5G13300.1 Thale cress cytosol 66.22 65.9
CDX69650 Canola cytosol 65.74 65.5
Bra008838.1-P Field mustard cytosol 65.49 65.25
Bra006193.1-P Field mustard cytosol 64.4 65.19
CDX78515 Canola cytosol 65.74 65.1
KRH01512 Soybean cytosol 65.61 64.36
GSMUA_Achr7P22530_001 Banana endoplasmic reticulum 56.5 62.84
AT5G61980.1 Thale cress cytosol 61.0 60.63
Solyc03g118260.1.1 Tomato cytosol 58.81 60.5
VIT_17s0000g00310.t01 Wine grape cytosol 60.39 60.1
CDY00242 Canola cytosol 56.62 59.21
Bra010046.1-P Field mustard cytosol 56.62 58.91
Bra029295.1-P Field mustard cytosol 61.12 58.35
CDY30689 Canola cytosol 61.0 58.24
KRH63858 Soybean cytosol 55.16 57.83
KRH59741 Soybean cytosol 54.92 56.5
CDX86943 Canola cytosol 48.12 55.62
PGSC0003DMT400036762 Potato cytosol 38.88 54.79
Zm00001d015278_P001 Maize mitochondrion 22.36 54.76
Solyc12g042170.1.1 Tomato cytosol 35.72 54.24
KRH54108 Soybean cytosol 46.66 52.03
TraesCS6A01G221400.1 Wheat cytosol 43.99 47.44
CDY53619 Canola cytosol 17.62 43.03
Zm00001d023982_P001 Maize cytosol 19.56 41.39
TraesCS2A01G203600.1 Wheat cytosol 10.69 18.53
TraesCS1A01G193000.1 Wheat cytosol 8.38 17.04
TraesCS4A01G323700.1 Wheat cytosol, nucleus, peroxisome, plastid 7.65 15.22
TraesCS4A01G099400.1 Wheat mitochondrion 7.41 13.09
CDY08879 Canola cytosol 2.67 6.98
Protein Annotations
Gene3D:1.20.1270.60Gene3D:1.25.40.20MapMan:22.3.4.1Gene3D:3.30.40.160InterPro:AGD1/2/3/4_BAR_plantInterPro:AH/BAR_dom_sf
InterPro:ARFGAP/RecOInterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sfInterPro:ArfGAP_domInterPro:ArfGAP_dom_sf
InterPro:BAR_domncoils:CoilGO:GO:0003674GO:GO:0005096GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0030234
InterPro:IPR001164InterPro:IPR001849InterPro:IPR002110InterPro:IPR004148InterPro:IPR020683InterPro:IPR027267
InterPro:IPR036770InterPro:IPR038508PFAM:PF00169PFAM:PF01412PFAM:PF12796PFAM:PF16746
InterPro:PH_domainPRINTS:PR00405PFscan:PS50003PFscan:PS50088PFscan:PS50115PFscan:PS50297
PANTHER:PTHR23180PANTHER:PTHR23180:SF242SMART:SM00105SMART:SM00233SMART:SM00248SMART:SM00721
SUPFAM:SSF103657SUPFAM:SSF48403SUPFAM:SSF50729SUPFAM:SSF57863EnsemblPlantsGene:TraesCS7A01G263800EnsemblPlants:TraesCS7A01G263800.2
TIGR:cd00204TIGR:cd07606TIGR:cd13250SEG:seg::
Description
No Description!
Coordinates
chr7A:-:262139201..262148734
Molecular Weight (calculated)
92789.6 Da
IEP (calculated)
7.406
GRAVY (calculated)
-0.524
Length
823 amino acids
Sequence
(BLAST)
001: MYFARLDDSP MFRTQIQSLE ESAEVLRERC LKFHKGCRKY TEGLGEAYDG DIAFASALET FGGGHNDPIS VAFGGPVMNK FTIALREIGT YKEVLRSQVE
101: HMLNDRLLNF VDVDLHDVKD ARKRFDKASL VYDQIREKYL SLKKGTRADI TTAIEEELHS ARSSFEQARF NLVTAISHIE AKKRFEFLEA VSATMDSHLR
201: YFKQGYELLH QMEPYINQVL AYSQQSRERA NKEQASLLER MHEYKKQIER DSRSSGNGLN VSPNVDGIQT IGRSSHKMIE AVMQSSTKGK VQTIRQGYLS
301: KRSSNLRGDW KRRFFVLDSR GMLYYYRKQI NRPAGVSQVQ RTNNTPEHGS GLLSRLFSSH YHGIHDEKSV ARHTVNLLTS TIKVDAEQSD LRFCFRIISP
401: MKIYTLQAES ALDQMDWIEK ITGVIASLLN AQSPEQCLHS PRSCGHDRSA SESSSYTSSV ELETSTSEDL TLEKNTGNGQ HHHRTNIKPE KPIDLLRRVD
501: GNTICADCGA AEPDWASLNL GALLCIECSG VHRNLGVHIS KVRSLTLDVR VWEPSVINLF QSLGNMFVNR VWEETLPSSN NGSSVDNTST NGSQAAQYLT
601: TTKPKHSDPF SAKEKFIHAK YADKEFVWRH SIDEIHIAQQ MWDSVTANDK KGVYNLIVAS HANVNLVYGQ MASGLLLNLG KALKQEQPTS PPDGSPRFFD
701: CNSHEKVSPR ESLSPPSTSS HVDELDDRYE GFSLLHLACR VADVGMVELL LQYGASVNVS DSRGRMPLHH CILKGRHLHA KLLLSRGADT HAIDRDGRSA
801: LQYAMDRSTS DEDMLALLEE HFR
Best Arabidopsis Sequence Match ( AT1G10870.1 )
(BLAST)
001: MATFINLEDS PMFQKQVCSL EGTADELKDR CQKLYKGVKK FMGTLGEASK GESAFAACLE EFGGGPDDPI SLSIGGPVIS KFINALRELA SYKEFLCSQV
101: EHVLLERLMN FISVDLQEAK ESRHRFDKAA HSYDQSREKF VSLKKNTRGE IVAELEEDLE NSKSTFEKSR FNLVNSLMTI EAKKKYEFLE SISAIMDAHL
201: RYFKLGYDLL NQLEPFIHQI LTYAQQSKEQ SKIEQDRLAR RIQEFRTQSE LDSQQLVANA ESSGANGNRV GGNIPYKNTE TSLTADKEVI KQGYLLKRSS
301: SLRTDWKRKF FVLDSHGSMY YYRTNGNKSM GSHHHYSGSS DHNTGVFGRF RARHNRSGSL TEGSLGYNTI DLRTSLIKLD AEDMDLRLCF RIISPQKTYT
401: LQAENGADRM DWVNKITKAI GTLLNSHFLQ QSPVRYLDKD NSSSAPANAV VSGDQIRHND SRQNIGDDVS TILRGLPGNN ACAECNAPEP DWASLNLGVL
501: LCIQCSGVHR NLGVHISKVR SLSLDVKVWE PTILDLFRNL GNVYCNSLWE GLLHLDDDCE DGSALSHASV SKPCPEDSFS VKEKYILGKY LEKALVIKDE
601: SEANLSAASR IWEAVQSRNI REIYRLIVTT GDVNIINTKF DDITDIDAYH HIDAAEKAVK KRHDPTVCQR IKESNEPRSC LQGCSLLHVA CHIGDSVLLE
701: LLLQFGADLN IRDYHGRTPL HHCISSGNHK FAKILLRRGA RPSIEDDGGL SVLERAMEMG AITDEELFLL LAECA
Arabidopsis Description
AGD4ARF-GAP domain 4 [Source:TAIR;Acc:AT1G10870]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.