Factsheet for AT5G61980.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029295.1-P	Field mustard	cytosol	94.57	90.84
Bra010046.1-P	Field mustard	cytosol	86.59	90.64
CDY30689	Canola	cytosol	94.32	90.6
CDY00242	Canola	cytosol	84.3	88.69
CDX86943	Canola	cytosol	75.36	87.64
Zm00001d049872_P001	Maize	cytosol	45.29	68.31
GSMUA_Achr11P...	Banana	cytosol	63.16	64.09
AT5G13300.1	Thale cress	cytosol	63.16	63.24
VIT_17s0000g00310.t01	Wine grape	cytosol	62.68	62.76
GSMUA_Achr4P00060_001	Banana	cytosol	62.56	61.89
TraesCS5A01G293000.1	Wheat	cytosol	61.47	61.25
TraesCS5B01G292200.1	Wheat	cytosol	61.47	61.03
Os09t0510700-01	Rice	cytosol	61.59	61.0
TraesCS7A01G263800.2	Wheat	cytosol	60.63	61.0
EER99172	Sorghum	cytosol	61.35	60.77
TraesCS5D01G300300.2	Wheat	cytosol	61.47	60.6
Zm00001d021087_P003	Maize	cytosol	61.23	60.57
HORVU7Hr1G055220.21	Barley	cytosol	60.51	60.29
Solyc03g118260.1.1	Tomato	cytosol	58.21	60.25
OQU80812	Sorghum	cytosol	59.66	59.95
Zm00001d031667_P006	Maize	cytosol	59.54	59.9
HORVU5Hr1G077570.15	Barley	cytosol	60.51	59.86
Os08t0537600-01	Rice	plasma membrane	59.9	59.69
TraesCS7B01G161800.1	Wheat	endoplasmic reticulum	59.78	58.44
TraesCS7D01G264700.1	Wheat	endoplasmic reticulum	59.78	58.44
Zm00001d009353_P001	Maize	cytosol	8.45	57.85
PGSC0003DMT400036762	Potato	cytosol	40.22	57.02
GSMUA_Achr7P22530_001	Banana	endoplasmic reticulum	49.4	55.27
Zm00001d015981_P001	Maize	peroxisome	10.02	54.25
Zm00001d004245_P003	Maize	cytosol	11.11	47.92
Zm00001d015278_P001	Maize	mitochondrion	19.32	47.62
AT1G60860.1	Thale cress	cytosol	39.73	42.4
AT1G10870.2	Thale cress	cytosol	39.73	42.18
Zm00001d049871_P001	Maize	cytosol	9.18	39.79
Zm00001d023982_P001	Maize	cytosol	15.46	32.9
AT3G17660.2	Thale cress	nucleus	7.37	24.8
AT5G54310.1	Thale cress	cytosol	10.51	18.01
AT5G46750.1	Thale cress	cytosol	7.85	16.17
AT4G17890.1	Thale cress	cytosol	7.73	15.5
AT2G35210.1	Thale cress	cytosol	6.64	13.92
AT3G53710.2	Thale cress	cytosol	7.61	13.73
AT2G37550.1	Thale cress	mitochondrion	7.49	13.6

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:1.25.40.20	MapMan:22.3.4.1	Gene3D:3.30.40.160	EntrezGene:836319	UniProt:A0A178ULW4
ProteinID:AED97545.1	Symbol:AGD1	InterPro:AGD1/2/3/4_BAR_plant	InterPro:AH/BAR_dom_sf	InterPro:ARFGAP/RecO	ArrayExpress:AT5G61980
EnsemblPlantsGene:AT5G61980	RefSeq:AT5G61980	TAIR:AT5G61980	RefSeq:AT5G61980-TAIR-G	EnsemblPlants:AT5G61980.1	TAIR:AT5G61980.1
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	ProteinID:BAB10160.1
InterPro:BAR_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005096	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0007010
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0030139	GO:GO:0030234	GO:GO:0043547
GO:GO:0046872	InterPro:IPR001164	InterPro:IPR001849	InterPro:IPR002110	InterPro:IPR004148	InterPro:IPR020683
InterPro:IPR027267	InterPro:IPR036770	InterPro:IPR038508	RefSeq:NP_201004.2	ProteinID:OAO94550.1	PFAM:PF00169
PFAM:PF01412	PFAM:PF13637	PFAM:PF16746	InterPro:PH_domain	PO:PO:0000037	PO:PO:0000084
PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009001	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009052	PO:PO:0020100	PO:PO:0025022	PO:PO:0025195
PO:PO:0025281	PRINTS:PR00405	PFscan:PS50003	PFscan:PS50088	PFscan:PS50115	PFscan:PS50297
PANTHER:PTHR23180	PANTHER:PTHR23180:SF373	UniProt:Q9FIT8	SMART:SM00105	SMART:SM00233	SMART:SM00248
SMART:SM00721	SUPFAM:SSF103657	SUPFAM:SSF48403	SUPFAM:SSF50729	SUPFAM:SSF57863	UniParc:UPI00018132C7
SEG:seg	:	:	:	:	:

Description

AGD1ADP-ribosylation factor GTPase-activating protein AGD1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIT8]

Coordinates

chr5:+:24894053..24899973

Molecular Weight (calculated)

93610.0 Da

IEP (calculated)

7.474

GRAVY (calculated)

-0.488

Length

828 amino acids

Sequence
(BLAST)

001: MHFAKLDDSP MFRQQMQSME ESAELLRLRC LRFYKGCRKY TEGLGEGYDA DIGFVNALES FGGGHNDPVC VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HMLSDRLLQF VNGDVHEVKE ARKRFDKATI TYDQAREKYL SLRKSTRLDV AATIEEDLHS ARTTFEQARF HLVSALSNAE SKKRFEFLEA VSGTMDAHLR
201: FFKQGYELLH QMEPFINQVL AYAHQSRECA NYEMASLNER MQEYQRQVDR ETRNSCVSPT GDGMRHNSRN SQKVIEAVMQ SAAKGKVQTI RQGYLSKRSS
301: NLRGDWKRRF FILDSRGMLY YYRKPWNWSS GNGSRSVVHR NMASENSPGL LSRWLSSHYH GGVHDEKPVA RHTVNLLTST IKVDADQTDL RFCFRIISPT
401: KVYTLQAENA QDQMDWIEKI TGVIASLLSF QTPERAIMRL STVDGGDTFS ASDSGSLADP YDIEQAESGE STVEHPMTGG NRSRFSGCLQ QHDMVKTEKP
501: IDVLTRVLGN ERCADCGAPE PDWASLNLGV LICIECSGIH RNLGVHISKV RSLTLDVKVW EPSVLTLFQS LGNVYVNSVW EELLNSESRT SSASRSSGTP
601: KSDRPRKLLV RKPGFNDPIS VKELFIHAKY SERIFVRKAI DSQHFQAVFQ EIWENVRAND KKSVYRHIVC SEADVNALRG QASYTVSLPL SKMMQMEETL
701: EAKFKSIEEE FQENPAGYSN SRGDGESMVR EETSNDCSLL HLACLSADIG MVELLLQYGA KINATDSKGR TPLHHCIISR RYAIARLLLM RGGDPNAVDK
801: DSNIPVKYAS QTDLNDSELI ALLTDSKR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.