Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- golgi 2
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30849 | Canola | cytosol | 83.88 | 85.94 |
| Bra039812.1-P | Field mustard | cytosol | 83.66 | 85.14 |
| CDX76193 | Canola | cytosol | 83.66 | 85.14 |
| CDX78196 | Canola | cytosol | 82.35 | 84.94 |
| CDX73533 | Canola | cytosol | 81.7 | 84.08 |
| Bra007020.1-P | Field mustard | cytosol | 82.79 | 83.7 |
| AT2G37550.1 | Thale cress | mitochondrion | 78.0 | 78.51 |
| VIT_08s0007g00010.t01 | Wine grape | mitochondrion | 67.97 | 67.1 |
| PGSC0003DMT400023046 | Potato | mitochondrion | 64.49 | 63.38 |
| Solyc09g010520.2.1 | Tomato | nucleus | 64.49 | 63.38 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 57.73 | 62.5 |
| Zm00001d007856_P001 | Maize | cytosol | 37.04 | 62.5 |
| KRG95812 | Soybean | endoplasmic reticulum | 66.45 | 62.37 |
| Solyc10g084690.1.1 | Tomato | mitochondrion | 62.31 | 62.31 |
| KRH32302 | Soybean | mitochondrion | 64.71 | 62.0 |
| KRH19707 | Soybean | cytosol | 64.92 | 61.95 |
| PGSC0003DMT400028571 | Potato | mitochondrion | 61.87 | 61.87 |
| Os03t0278400-01 | Rice | plasma membrane | 61.0 | 61.81 |
| KRH67539 | Soybean | mitochondrion | 65.36 | 61.73 |
| Zm00001d047793_P001 | Maize | extracellular, plasma membrane | 59.91 | 60.71 |
| EER92462 | Sorghum | mitochondrion | 59.91 | 60.18 |
| Zm00001d028656_P001 | Maize | mitochondrion | 59.26 | 59.91 |
| TraesCS4A01G099400.1 | Wheat | mitochondrion | 60.35 | 59.44 |
| GSMUA_Achr7P15230_001 | Banana | cytosol | 56.43 | 59.27 |
| TraesCS4D01G205800.1 | Wheat | mitochondrion | 60.35 | 59.19 |
| TraesCS4B01G204900.1 | Wheat | mitochondrion | 59.26 | 58.62 |
| GSMUA_Achr9P04020_001 | Banana | mitochondrion | 60.35 | 57.59 |
| GSMUA_Achr10P... | Banana | mitochondrion | 49.46 | 57.18 |
| GSMUA_Achr5P28610_001 | Banana | endoplasmic reticulum, vacuole | 54.9 | 55.38 |
| GSMUA_Achr7P10440_001 | Banana | cytosol, plastid | 44.88 | 52.02 |
| VIT_00s0250g00050.t01 | Wine grape | plastid | 45.53 | 48.72 |
| HORVU4Hr1G059060.2 | Barley | mitochondrion | 60.57 | 48.26 |
| AT3G17660.2 | Thale cress | nucleus | 12.64 | 23.58 |
| AT5G46750.1 | Thale cress | cytosol | 20.26 | 23.13 |
| AT4G17890.1 | Thale cress | cytosol | 20.48 | 22.76 |
| AT2G35210.1 | Thale cress | cytosol | 17.86 | 20.76 |
| AT5G54310.1 | Thale cress | cytosol | 18.74 | 17.81 |
| AT5G13300.1 | Thale cress | cytosol | 13.94 | 7.74 |
| AT5G61980.1 | Thale cress | cytosol | 13.73 | 7.61 |
| AT1G60860.1 | Thale cress | cytosol | 12.2 | 7.22 |
| AT1G10870.2 | Thale cress | cytosol | 11.55 | 6.79 |
| Zm00001d032879_P001 | Maize | extracellular | 0.87 | 1.84 |
Protein Annotations
| MapMan:22.3.4.2 | Gene3D:3.30.40.160 | EntrezGene:824538 | ProteinID:AEE79130.1 | ProteinID:AEE79131.1 | EMBL:AF184146 |
| Symbol:AGD6 | ProteinID:ANM64695.1 | InterPro:ARFGAP/RecO | ArrayExpress:AT3G53710 | EnsemblPlantsGene:AT3G53710 | RefSeq:AT3G53710 |
| TAIR:AT3G53710 | RefSeq:AT3G53710-TAIR-G | EnsemblPlants:AT3G53710.2 | TAIR:AT3G53710.2 | InterPro:ArfGAP_dom | InterPro:ArfGAP_dom_sf |
| Unigene:At.48765 | EMBL:BT030393 | ProteinID:CAB88333.1 | GO:GO:0003674 | GO:GO:0005096 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043547 | GO:GO:0046872 | InterPro:IPR001164 | InterPro:IPR038508 |
| RefSeq:NP_001030854.1 | RefSeq:NP_001319740.1 | RefSeq:NP_190939.1 | PFAM:PF01412 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00405 | PFscan:PS50115 | PANTHER:PTHR23180 | PANTHER:PTHR23180:SF35 |
| UniProt:Q9M354 | SMART:SM00105 | SUPFAM:SSF57863 | UniParc:UPI00000A2849 | SEG:seg | : |
Description
AGD6Probable ADP-ribosylation factor GTPase-activating protein AGD6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M354]
Coordinates
chr3:-:19903234..19905515
Molecular Weight (calculated)
49726.5 Da
IEP (calculated)
7.282
GRAVY (calculated)
-0.938
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATRQLRTL QSQPENKVCV DCAQKNPQWA SVSYGIFMCL ECSGKHRGLG VHISFVRSVT MDSWSAIQIK KMEAGGNERL NKFFAQYGIA KETDIISKYN
101: SNAASVYRDR IQALAEGRPW NDPPVVKEAN KKPPLAQGGY GNNNNNNNGG WDSWDNDDSY KSDMRRNQSA NDFRASGNRE GAHVKSKSSE DIYTRSQLEA
201: SAAGKESFFA RRMAENESKP EGLPPSQGGK YVGFGSSSAP PPRNNQQDDV FSVVSQGFGR LSLVAASAAQ SAASVVQTGT KEFTSKVKEG GYDHKVSETV
301: NVVANKTTEI GHRTWGIMKG VMAMATQKVE EFTKEGSTSW NQQSENEGNG YYQNFGNGNK AANSSVGGGR PQSSSTSGHY NNSQNSNSWD SWGENENKKT
401: EAVAPKGSSA SNDDDGWTGW DDHDAKDDGF DGHYQSAGDK KSAGHNGKSD TAWTGGGFL
101: SNAASVYRDR IQALAEGRPW NDPPVVKEAN KKPPLAQGGY GNNNNNNNGG WDSWDNDDSY KSDMRRNQSA NDFRASGNRE GAHVKSKSSE DIYTRSQLEA
201: SAAGKESFFA RRMAENESKP EGLPPSQGGK YVGFGSSSAP PPRNNQQDDV FSVVSQGFGR LSLVAASAAQ SAASVVQTGT KEFTSKVKEG GYDHKVSETV
301: NVVANKTTEI GHRTWGIMKG VMAMATQKVE EFTKEGSTSW NQQSENEGNG YYQNFGNGNK AANSSVGGGR PQSSSTSGHY NNSQNSNSWD SWGENENKKT
401: EAVAPKGSSA SNDDDGWTGW DDHDAKDDGF DGHYQSAGDK KSAGHNGKSD TAWTGGGFL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.