Factsheet for Zm00001d032879_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
cytosol 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	extracellular
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023982_P001	Maize	cytosol	40.55	22.62
Zm00001d009353_P001	Maize	cytosol	11.98	21.49
Zm00001d015981_P001	Maize	peroxisome	11.98	16.99
Zm00001d004245_P003	Maize	cytosol	11.06	12.5
Zm00001d049872_P001	Maize	cytosol	28.57	11.29
Zm00001d015278_P001	Maize	mitochondrion	14.75	9.52
Zm00001d031667_P006	Maize	cytosol	34.56	9.11
Zm00001d021087_P003	Maize	cytosol	32.72	8.48
Zm00001d051187_P009	Maize	plastid	24.42	7.52
Zm00001d016932_P001	Maize	endoplasmic reticulum	2.76	3.28
Zm00001d031462_P001	Maize	endoplasmic reticulum, extracellular	2.76	3.14
Zm00001d030031_P002	Maize	plastid	5.07	2.28
Zm00001d047020_P002	Maize	cytosol	3.69	1.82
Zm00001d007856_P001	Maize	cytosol	1.84	1.47
Zm00001d046873_P001	Maize	cytosol, plastid	3.23	1.32
Zm00001d016547_P001	Maize	cytosol, plastid	3.23	1.32
Zm00001d051030_P001	Maize	cytosol, plastid	3.23	1.32
Zm00001d012827_P002	Maize	cytosol	2.3	1.19
VIT_00s0250g00050.t01	Wine grape	plastid	2.3	1.17
Zm00001d034885_P002	Maize	cytosol	1.84	0.96
Zm00001d047793_P001	Maize	extracellular, plasma membrane	1.84	0.88
Zm00001d028656_P001	Maize	mitochondrion	1.84	0.88
AT2G37550.1	Thale cress	mitochondrion	1.84	0.88
AT3G53710.2	Thale cress	cytosol	1.84	0.87
Solyc10g084690.1.1	Tomato	mitochondrion	1.84	0.87
PGSC0003DMT400028571	Potato	mitochondrion	1.84	0.87
Solyc09g010520.2.1	Tomato	nucleus	1.84	0.86
PGSC0003DMT400023046	Potato	mitochondrion	1.84	0.86
KRH32302	Soybean	mitochondrion	1.84	0.84
KRH19707	Soybean	cytosol	1.84	0.83
KRH67539	Soybean	mitochondrion	1.84	0.82
KRG95812	Soybean	endoplasmic reticulum	1.84	0.82
GSMUA_Achr7P10440_001	Banana	cytosol, plastid	1.38	0.76
GSMUA_Achr10P...	Banana	mitochondrion	1.38	0.76
Zm00001d021802_P001	Maize	cytosol	1.38	0.63
Zm00001d006602_P001	Maize	cytosol	1.38	0.6
CDY26647	Canola	plastid	0.46	0.55
Bra026910.1-P	Field mustard	plastid	0.46	0.55
Zm00001d049871_P001	Maize	cytosol	0.0	0.0
CDY23645	Canola	cytosol	0.0	0.0
CDY16083	Canola	cytosol	0.0	0.0
Zm00001d051188_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d032879_P001	EnsemblPlants:Zm00001d032879_T001	EnsemblPlantsGene:Zm00001d032879	Gene3D:1.25.40.1040	InterPro:Kinase-like_dom_sf	PANTHER:PTHR22767
PANTHER:PTHR22767:SF2	ProteinID:ONM06280.1	SUPFAM:SSF56112	UniParc:UPI0008431947	UniProt:A0A1D6KUP0	MapMan:50.2.7

Description

ADP-ribosylation factor GTPase-activating protein AGD1

Coordinates

chr1:-:241278557..241284062

Molecular Weight (calculated)

24803.9 Da

IEP (calculated)

7.322

GRAVY (calculated)

-0.340

Length

217 amino acids

Sequence
(BLAST)

001: MSSYAALIFY FSSFTQTQMR DLSGFVETRQ QLLSLKPNHR MNWIGFAVAH HLNSDSSKAV EVLEAYEGTL EDDYPPENER YEHNEMLLYK MTTAISIEDV
101: RREVKILKAL SGHSNLVKFY DALSPEAKDF VKRLLNKDYR KRMTAAQALL VGRGDLCMSP VEFEPSVSDD LVLEKKSGNG QHDVRGTHHH RTSMKPEKPI
201: DLLRKLMAII CVLTVVL

Best Arabidopsis Sequence Match ( AT1G80410.1 )
(BLAST)

001: MGASLPPKEA NLFKLIVKSY ETKQYKKGLK AADAILKKFP DHGETLSMKG LTLNCMDRKT EAYELVRLGV KNDIKSHVCW HVLGLLYRSD REYREAIKCY
101: RNALRIDPDN LEILRDLSLL QAQMRDLSGF VETRQQLLTL KPNHRMNWIG FAVSQHLNAN ASKAVEILEA YEGTLEDDYP PENELIEHTE MILYKVSLLE
201: ESGSFDKALE ELHKKEPKIV DKLSYKEQEV SLLSKVGRLE EANKLYRVLL SMNPDNYRYH EGLQKCLGLY SESGQYSSDQ IEKLNALYQS LSEQYTRSSA
301: VKRIPLDFLQ DENFKEAVAK YIKPLLTKGV PSLFSDLSSL YDHPRKPDIL EQLVVEMKHS IGTTGSFPGS DVKEPPSTLL WTLFFLAQHY DRRGQYDVAL
401: CKIDEAIAHT PTVIDLYSVK SRIMKHAGDL TAAAALADEA RGMDLADRYI NSECVKRMLQ ADQVPLAEKT AVLFTKEGDQ LNNLHDMQCM WYDLASGDSY
501: FRQGDLGRAL KKFLAVEKHY ADISEDQFDF HSYCLRKMTL RSYVDMLKFQ DRLHSFPYFH KAAIRAIRCY LKLHDSPKST AGEDEMSKLA PAQKKKIKKQ
601: KKAEARAKKE AESKSEESTA SGASKSGKRN VKPVDPDPHG QKLIQVEEPM AEASKYLRLL QKHSPNSLET HLLSFEVNMR KQKFLLAFQA VKQLLKLGAE
701: NPDSHRSLVK FFLMTESISA PTTEAEKLRW RVLEAERPSI SQLQNKSLME ANKEFLGRHE DSLVHRAAYA EMLYILDPSK KTEAIKIIED STNKVVQTNE
801: ALGQAREWKL KDCIAVHTLL DTVLLDSQAA SRWKSRCAEY FPCSTHFEGK HCSLMPDSVY NSSRKSNENG DTPNHPMGQT ELSDGQLEAF KSLSVAT

Arabidopsis Description

EMB2753Tetratricopeptide repeat (TPR)-containing protein [Source:UniProtKB/TrEMBL;Acc:F4HS68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.