Factsheet for Zm00001d021087_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004245_P003
Zm00001d009353_P001
Zm00001d009504_P002
Zm00001d013705_P001
Zm00001d013996_P003
Zm00001d015278_P001
Zm00001d015981_P001
Zm00001d021087_P003
Zm00001d023982_P001
Zm00001d030661_P001
Zm00001d031667_P006
Zm00001d033283_P001
Zm00001d038955_P001
Zm00001d039404_P001
Zm00001d045530_P001
Zm00001d049871_P001
Zm00001d049872_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13300.1	Zm00001d013705_P001	AT3G63300.1	19363154
AT5G13300.1	Zm00001d030661_P001	AT3G63300.1	19363154
AT5G13300.1	Zm00001d033283_P001	AT3G63300.1	19363154
AT5G13300.1	Zm00001d004245_P003	AT5G13300.1	15743878
AT5G13300.1	Zm00001d009353_P001	AT5G13300.1	15743878
AT5G13300.1	Zm00001d015278_P001	AT5G13300.1	15743878
AT5G13300.1	Zm00001d015981_P001	AT5G13300.1	15743878
AT5G13300.1	Zm00001d021087_P003	AT5G13300.1	15743878
AT5G13300.1	Zm00001d023982_P001	AT5G13300.1	15743878
AT5G13300.1	Zm00001d031667_P006	AT5G13300.1	15743878
AT5G13300.1	Zm00001d049871_P001	AT5G13300.1	15743878
AT5G13300.1	Zm00001d049872_P001	AT5G13300.1	15743878
AT5G13300.1	Zm00001d013996_P003	AT5G26980.1	15743878
AT5G13300.1	Zm00001d039404_P001	AT5G26980.1	15743878
AT5G13300.1	Zm00001d045530_P001	AT5G26980.1	15743878
AT5G13300.1	Zm00001d009504_P002	AT5G42080.1	15923323
AT5G13300.1	Zm00001d038955_P001	AT5G42080.1	15923323

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99172	Sorghum	cytosol	96.65	96.77
Os09t0510700-01	Rice	cytosol	89.49	89.59
TraesCS5B01G292200.1	Wheat	cytosol	87.57	87.89
TraesCS5A01G293000.1	Wheat	cytosol	86.86	87.48
TraesCS5D01G300300.2	Wheat	cytosol	87.34	87.02
HORVU5Hr1G077570.15	Barley	cytosol	86.14	86.14
Zm00001d049872_P001	Maize	cytosol	52.81	80.51
CDX70496	Canola	cytosol	52.21	79.02
Zm00001d031667_P006	Maize	cytosol	75.27	76.55
GSMUA_Achr11P...	Banana	cytosol	74.19	76.1
Zm00001d009353_P001	Maize	cytosol	10.75	74.38
GSMUA_Achr4P00060_001	Banana	cytosol	73.84	73.84
Solyc12g042180.1.1	Tomato	cytosol	19.47	72.77
KRH45201	Soybean	cytosol	70.37	71.57
VIT_01s0150g00030.t01	Wine grape	cytosol	69.77	70.19
CDY09784	Canola	cytosol	66.55	69.8
AT5G13300.1	Thale cress	cytosol	68.46	69.29
Zm00001d015981_P001	Maize	peroxisome	12.66	69.28
PGSC0003DMT400005756	Potato	cytosol	67.62	69.28
KRH01512	Soybean	cytosol	69.06	68.89
Solyc05g023750.2.1	Tomato	cytosol	67.14	68.79
CDX69650	Canola	cytosol	67.62	68.52
CDX78515	Canola	cytosol	67.86	68.35
Bra008838.1-P	Field mustard	cytosol	67.38	68.28
Bra006193.1-P	Field mustard	cytosol	66.31	68.27
GSMUA_Achr7P22530_001	Banana	endoplasmic reticulum	59.62	67.43
Zm00001d016932_P001	Maize	endoplasmic reticulum	14.7	67.21
Zm00001d049871_P001	Maize	cytosol	14.93	65.44
Zm00001d031462_P001	Maize	endoplasmic reticulum, extracellular	14.7	64.4
Solyc03g118260.1.1	Tomato	cytosol	59.38	62.12
VIT_17s0000g00310.t01	Wine grape	cytosol	60.69	61.43
AT5G61980.1	Thale cress	cytosol	60.57	61.23
Zm00001d004245_P003	Maize	cytosol	13.98	60.94
CDY00242	Canola	cytosol	56.87	60.48
Bra010046.1-P	Field mustard	cytosol	56.15	59.42
Bra029295.1-P	Field mustard	cytosol	61.05	59.28
CDY30689	Canola	cytosol	60.93	59.16
PGSC0003DMT400036762	Potato	cytosol	41.22	59.08
CDX86943	Canola	cytosol	48.98	57.58
KRH59741	Soybean	cytosol	54.6	57.12
KRH63858	Soybean	cytosol	53.17	56.69
Solyc12g042170.1.1	Tomato	cytosol	36.56	56.46
Zm00001d015278_P001	Maize	mitochondrion	21.27	52.98
KRH54108	Soybean	cytosol	44.68	50.68
CDY53619	Canola	cytosol	18.16	45.1
Zm00001d051187_P009	Maize	plastid	37.28	44.26
Zm00001d023982_P001	Maize	cytosol	17.8	38.3
Zm00001d051188_P001	Maize	cytosol	5.5	34.85
Zm00001d032879_P001	Maize	extracellular	8.48	32.72
Zm00001d021802_P001	Maize	cytosol	11.11	19.42
Zm00001d006602_P001	Maize	cytosol	11.47	19.35
Zm00001d034885_P002	Maize	cytosol	7.41	14.9
Zm00001d007856_P001	Maize	cytosol	4.78	14.71
Zm00001d016547_P001	Maize	cytosol, plastid	9.08	14.29
Zm00001d046873_P001	Maize	cytosol, plastid	9.08	14.29
Zm00001d051030_P001	Maize	cytosol, plastid	9.08	14.29
Zm00001d012827_P002	Maize	cytosol	7.05	14.01
Zm00001d047793_P001	Maize	extracellular, plasma membrane	7.41	13.69
Zm00001d030031_P002	Maize	plastid	7.77	13.46
Zm00001d028656_P001	Maize	mitochondrion	7.29	13.44
Zm00001d047020_P002	Maize	cytosol	7.05	13.41
CDY08879	Canola	cytosol	2.75	7.3

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:1.25.40.20	EntrezGene:103632959	MapMan:22.3.4.1	Gene3D:3.30.40.160	UniProt:A0A1D6I8A5
InterPro:AGD1/2/3/4_BAR_plant	InterPro:AH/BAR_dom_sf	InterPro:ARFGAP/RecO	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
InterPro:ArfGAP_dom	InterPro:ArfGAP_dom_sf	InterPro:BAR_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005096
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0030234	GO:GO:0043547	GO:GO:0046872	InterPro:IPR001164	InterPro:IPR001849
InterPro:IPR002110	InterPro:IPR004148	InterPro:IPR020683	InterPro:IPR027267	InterPro:IPR036770	InterPro:IPR038508
ProteinID:ONM56275.1	PFAM:PF00169	PFAM:PF01412	PFAM:PF12796	PFAM:PF16746	InterPro:PH_domain
PRINTS:PR00405	PFscan:PS50003	PFscan:PS50088	PFscan:PS50115	PFscan:PS50297	PANTHER:PTHR23180
PANTHER:PTHR23180:SF242	SMART:SM00105	SMART:SM00233	SMART:SM00248	SMART:SM00721	SUPFAM:SSF103657
SUPFAM:SSF48403	SUPFAM:SSF50729	SUPFAM:SSF57863	UniParc:UPI0002215A1C	EnsemblPlantsGene:Zm00001d021087	EnsemblPlants:Zm00001d021087_P003
EnsemblPlants:Zm00001d021087_T003	SEG:seg	:	:	:	:

Description

Discolored-paralog3 Discolored-paralog3

Coordinates

chr7:-:142484402..142493269

Molecular Weight (calculated)

93751.5 Da

IEP (calculated)

7.341

GRAVY (calculated)

-0.538

Length

837 amino acids

Sequence
(BLAST)

001: MFFSRLDDSP MFRKQMQSLE EGAELLRERC LKFHKGCRKY TEGLGEAYDG DIAFASSLET FGGGHNDPIS VTFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HMLNDKLLQF VDIDLHEMKD ARKRFDKATL LYDQAREKYL SLKKGTRTDV ATAVEDELHS ARSLFEQARF NLVTALSNIE AKKRFEFLEA VSGTMDAHLR
201: YFKQGYELLH QMEPYINQVL AFAQQSRERS NYEQAALLER MQEFKRQIDR ESRWSPNGMN DSPNGDGIQT IGRSSHKMIE EAMQSASKGK VQTIRQGYLS
301: KRSSNLRGDW KRRFFVLDSR GMLYYYRKQN SRPSSGYSNQ RTSIPSEHGS GLLSRWFSSH YHGGVHDEKS VARHTVNLLT STIKVDADQS DLRFCFRIIS
401: PTKNYTLQAE SAMDQMDWIE KITGVIASLL SSQSPERHLI SSPKGSSHHR TASSSSSFSS STELEHSISE DCMLEKNSGS GYFEHSARVA QHHRTSMMKP
501: DKPIDLLRKV AGNNCCADCG ASEPDWASLN LGILLCIECS GVHRNMGVHI SKVRSLTLDV RVWEQSVINL FQSIGNTFAN SVWEEMLPSS SCVDHGDISR
601: ADGLENMSHG FAPKKPKQSD SIAVKEKFIH AKYAEKDFVR KHNMDGIQLA EQMWDNVSSN NKKGVYSLIV GSNADVNFSY GHTSFNSALT LGKALLLQEQ
701: SASPSNGSSR CFDRNPLEKG CTGDSVSPAS TSARIDGPDD YVEGLSLLHL ACRAADLGMV ELLLQYGANV NSTDSRGRTP LHHSIMKGRH VYAKLLLSRG
801: ADSQAADRDG RTALQYAIDS GTIEDEEILV LLEDPSR

Best Arabidopsis Sequence Match ( AT5G13300.1 )
(BLAST)

001: MHFTKLDDSP MFRKQLQSME ESAEILRERS LKFYKGCRKY TEGLGEAYDG DIAFASALET FGGGHNDPIS VAFGGPVMTK FTIALREIGT YKEVLRSQVE
101: HILNDRLLQF ANMDLHEVKE ARKRFDKASL TYDQAREKFL SLRKGTKSDV AAALEQELHT SRSMFEQARF NLVTALSNVE AKKRFEFLEA VSGTMDAHLR
201: YFKQGYELLH QMEPYINQVL TYAQQSRERS NYEQAALNEK MQEYKRQVDR ESRWGSNGSN GSPNGDGIQA IGRSSHKMID AVMQSAARGK VQTIRQGYLS
301: KRSSNLRGDW KRRFFVLDSR GMLYYYRKQC SKPSGSGSQL SGQRNSSELG SGLLSRWLSS NNHGHGGVHD EKSVARHTVN LLTSTIKVDA DQSDLRFCFR
401: IISPTKNYTL QAESALDQMD WIEKITGVIA SLLSSQVPEQ RLPGSPMGSG HHRSASESSS YESSEYDHPT TEEFVCERSF LGYNERPSRS FQPQRSIRKG
501: EKPIDALRKV CGNDKCADCG APEPDWASLN LGVLVCIECS GVHRNLGVHI SKVRSLTLDV KVWEPSVISL FQALGNTFAN TVWEELLHSR SAIHFDPGLT
601: VSDKSRVMVT GKPSYADMIS IKEKYIQAKY AEKLFVRRSR DSDFPQSAAQ QMWDAVSGND KKAVYRLIVN GDADVNYVYD QTSSSSLTLS RVILVPERPK
701: REDVLLRLRN ELLDRTGSSS NISPEGSGGS SLLHCACEKA DLGMVELLLQ YGANVNASDS SGQTPLHCCL LRGKVTIARL LLTRGADPEA MNREGKTALD
801: IAAESNFTDP EVLALLSDTN GYNHRQC

Arabidopsis Description

AGD3ADP-ribosylation factor GTPase-activating protein AGD3 [Source:UniProtKB/Swiss-Prot;Acc:Q5W7F2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.