Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
27297264
plasma membrane: 27341663 |
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19921 | Sorghum | cytosol | 89.85 | 98.85 |
| Zm00001d009504_P002 | Maize | cytosol | 94.18 | 96.19 |
| Os05t0556100-01 | Rice | plasma membrane | 85.67 | 94.25 |
| TraesCS1B01G411700.3 | Wheat | cytosol | 84.18 | 92.61 |
| TraesCS1D01G393000.2 | Wheat | cytosol | 84.03 | 92.45 |
| TraesCS1A01G385400.2 | Wheat | cytosol, golgi, nucleus, unclear | 84.03 | 92.45 |
| GSMUA_Achr8P27540_001 | Banana | cytosol | 80.6 | 88.67 |
| VIT_02s0025g01570.t01 | Wine grape | cytosol, extracellular | 79.4 | 87.36 |
| GSMUA_Achr6P26600_001 | Banana | cytosol | 79.4 | 87.36 |
| KRH41321 | Soybean | endoplasmic reticulum, nucleus | 78.21 | 85.9 |
| Solyc05g050600.2.1 | Tomato | nucleus, plastid | 78.06 | 85.88 |
| KRH60047 | Soybean | endoplasmic reticulum | 78.06 | 85.74 |
| PGSC0003DMT400000646 | Potato | cytosol | 77.31 | 84.92 |
| CDX67862 | Canola | cytosol | 77.16 | 84.75 |
| CDY25074 | Canola | cytosol | 77.16 | 84.75 |
| Solyc01g095970.2.1 | Tomato | plastid | 77.16 | 84.75 |
| Bra003469.1-P | Field mustard | cytosol | 72.69 | 84.7 |
| CDX67529 | Canola | cytosol | 77.01 | 84.59 |
| Bra028525.1-P | Field mustard | cytosol | 76.87 | 84.43 |
| CDY13364 | Canola | cytosol | 76.87 | 84.43 |
| AT5G42080.1 | Thale cress | cytosol | 76.72 | 84.26 |
| AT3G61760.1 | Thale cress | cytosol | 76.72 | 84.26 |
| CDY27661 | Canola | cytosol | 76.57 | 84.1 |
| KRH77654 | Soybean | endoplasmic reticulum | 76.42 | 83.93 |
| KRH27831 | Soybean | cytosol, endoplasmic reticulum, nucleus | 76.12 | 83.61 |
| CDX99702 | Canola | cytosol | 76.12 | 83.61 |
| HORVU1Hr1G084970.2 | Barley | plasma membrane | 84.33 | 83.58 |
| Bra025448.1-P | Field mustard | cytosol | 72.69 | 83.53 |
| KRH47905 | Soybean | cytosol, endoplasmic reticulum | 75.52 | 83.09 |
| KRH06461 | Soybean | cytosol | 60.15 | 77.65 |
| Zm00001d013426_P002 | Maize | plasma membrane | 62.84 | 68.9 |
| Zm00001d033751_P003 | Maize | plasma membrane | 62.54 | 68.58 |
| Zm00001d005306_P002 | Maize | cytosol, extracellular, mitochondrion | 59.7 | 63.69 |
| Zm00001d030005_P002 | Maize | cytosol, mitochondrion | 38.21 | 63.68 |
| Zm00001d042338_P002 | Maize | extracellular, mitochondrion | 33.43 | 27.42 |
| Zm00001d012027_P002 | Maize | cytosol | 33.43 | 26.35 |
| Zm00001d028495_P001 | Maize | cytosol | 23.28 | 23.15 |
| Zm00001d028497_P001 | Maize | cytosol | 18.51 | 19.87 |
| Zm00001d017979_P002 | Maize | extracellular, mitochondrion | 25.82 | 18.78 |
| Zm00001d037279_P005 | Maize | plasma membrane | 25.22 | 18.51 |
| Zm00001d044757_P006 | Maize | cytosol, nucleus, plasma membrane | 25.22 | 18.51 |
| Zm00001d004012_P001 | Maize | cytosol | 29.85 | 18.28 |
| Zm00001d032256_P001 | Maize | cytosol | 24.18 | 17.42 |
| Zm00001d043451_P001 | Maize | plastid | 19.85 | 16.16 |
| Zm00001d023583_P005 | Maize | plastid | 17.46 | 15.44 |
| Zm00001d012752_P006 | Maize | plastid | 18.81 | 15.02 |
| Zm00001d051815_P002 | Maize | cytosol | 9.4 | 11.48 |
Protein Annotations
| Gene3D:1.20.120.1240 | MapMan:22.1.7.1 | UniProt:A0A1D6MC12 | ProteinID:AQK88296.1 | InterPro:Dynamin_GTPase | InterPro:Dynamin_GTPase_CS |
| InterPro:Dynamin_SF | InterPro:Dynamin_central | InterPro:GED | InterPro:GED_dom | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | InterPro:G_DYNAMIN_dom | InterPro:IPR020850 | InterPro:IPR030381 | InterPro:P-loop_NTPase |
| PFAM:PF00350 | PFAM:PF01031 | PFAM:PF02212 | PRINTS:PR00195 | ScanProsite:PS00410 | PFscan:PS51388 |
| PFscan:PS51718 | PANTHER:PTHR11566 | PANTHER:PTHR11566:SF138 | SMART:SM00053 | SMART:SM00302 | SUPFAM:SSF52540 |
| TMHMM:TMhelix | UniParc:UPI0008439E81 | EnsemblPlantsGene:Zm00001d038955 | EnsemblPlants:Zm00001d038955_P001 | EnsemblPlants:Zm00001d038955_T001 | : |
Description
Dynamin-related protein 1A
Coordinates
chr6:-:167632187..167638875
Molecular Weight (calculated)
75248.0 Da
IEP (calculated)
8.650
GRAVY (calculated)
-0.260
Length
670 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNLITLVNK LQRACTALGD HGEESALPTL WDSLPAIAVV GGQVPFFPSR ARFFALVLIG SGAVAPASWV WISRVAGGTA RSSGKSSVLE SVVGKDFLPR
101: GSGIVTRRPL VLQLHRIDGD REYAEFMHLP RKRFTDFAAV RKEIADETDR ETGRSKQIST VPIHLSIFSP HGKMQTLEGY IVTVALSHLN CPLPIVNLTL
201: IDLPGLTKVA VDGQPESIVH DIENMVRSYI EKPNCIILAV SPANQDLATS DAIKISREVD PKGERTFGVL TKIDLMDKGT DAVDILEGRS YRLQTPWVGV
301: VNRSQQDINK NVDMIAARRR EREYFASTPE YKHMASRMGS EYLGKMLSKH LEQVIKSRIP GIQSLITKTI AELETELNRL GKPIANDAGG KLYTIMEICR
401: MFDGIYKEHL DGVRPGGEKV YHVFDNQFPV AIKRLQFDKQ LSMENVRKLI TEADGYQPHL IAPEQGYRRL IESCLISIRG PAEAAVDAVH AILKDLVRKA
501: INETHELKQF PTLRVEVGNA AFESLDRMRD ESKKNTLKLV DMECSYLTVD FFRKLPQDVE KGGNPSHSIF DRYNDSYLRR IGQTVLSYVN MVCSTLRNSI
601: PKSIVYCQVR EAKRSLLDHF FTELGAREMK QLSKLLDEDP AVMERRTNLA KRLELYRSAQ SEIDAVAWSK
101: GSGIVTRRPL VLQLHRIDGD REYAEFMHLP RKRFTDFAAV RKEIADETDR ETGRSKQIST VPIHLSIFSP HGKMQTLEGY IVTVALSHLN CPLPIVNLTL
201: IDLPGLTKVA VDGQPESIVH DIENMVRSYI EKPNCIILAV SPANQDLATS DAIKISREVD PKGERTFGVL TKIDLMDKGT DAVDILEGRS YRLQTPWVGV
301: VNRSQQDINK NVDMIAARRR EREYFASTPE YKHMASRMGS EYLGKMLSKH LEQVIKSRIP GIQSLITKTI AELETELNRL GKPIANDAGG KLYTIMEICR
401: MFDGIYKEHL DGVRPGGEKV YHVFDNQFPV AIKRLQFDKQ LSMENVRKLI TEADGYQPHL IAPEQGYRRL IESCLISIRG PAEAAVDAVH AILKDLVRKA
501: INETHELKQF PTLRVEVGNA AFESLDRMRD ESKKNTLKLV DMECSYLTVD FFRKLPQDVE KGGNPSHSIF DRYNDSYLRR IGQTVLSYVN MVCSTLRNSI
601: PKSIVYCQVR EAKRSLLDHF FTELGAREMK QLSKLLDEDP AVMERRTNLA KRLELYRSAQ SEIDAVAWSK
001: MENLISLVNK IQRACTALGD HGDSSALPTL WDSLPAIAVV GGQSSGKSSV LESIVGKDFL PRGSGIVTRR PLVLQLQKID DGTREYAEFL HLPRKKFTDF
101: AAVRKEIQDE TDRETGRSKA ISSVPIHLSI YSPNVVNLTL IDLPGLTKVA VDGQSDSIVK DIENMVRSYI EKPNCIILAI SPANQDLATS DAIKISREVD
201: PSGDRTFGVL TKIDLMDKGT DAVEILEGRS FKLKYPWVGV VNRSQADINK NVDMIAARKR EREYFSNTTE YRHLANKMGS EHLAKMLSKH LERVIKSRIP
301: GIQSLINKTV LELETELSRL GKPIAADAGG KLYSIMEICR LFDQIFKEHL DGVRAGGEKV YNVFDNQLPA ALKRLQFDKQ LAMDNIRKLV TEADGYQPHL
401: IAPEQGYRRL IESSIVSIRG PAEASVDTVH AILKDLVHKS VNETVELKQY PALRVEVTNA AIESLDKMRE GSKKATLQLV DMECSYLTVD FFRKLPQDVE
501: KGGNPTHSIF DRYNDSYLRR IGSNVLSYVN MVCAGLRNSI PKSIVYCQVR EAKRSLLDHF FAELGTMDMK RLSSLLNEDP AIMERRSAIS KRLELYRAAQ
601: SEIDAVAWSK
101: AAVRKEIQDE TDRETGRSKA ISSVPIHLSI YSPNVVNLTL IDLPGLTKVA VDGQSDSIVK DIENMVRSYI EKPNCIILAI SPANQDLATS DAIKISREVD
201: PSGDRTFGVL TKIDLMDKGT DAVEILEGRS FKLKYPWVGV VNRSQADINK NVDMIAARKR EREYFSNTTE YRHLANKMGS EHLAKMLSKH LERVIKSRIP
301: GIQSLINKTV LELETELSRL GKPIAADAGG KLYSIMEICR LFDQIFKEHL DGVRAGGEKV YNVFDNQLPA ALKRLQFDKQ LAMDNIRKLV TEADGYQPHL
401: IAPEQGYRRL IESSIVSIRG PAEASVDTVH AILKDLVHKS VNETVELKQY PALRVEVTNA AIESLDKMRE GSKKATLQLV DMECSYLTVD FFRKLPQDVE
501: KGGNPTHSIF DRYNDSYLRR IGSNVLSYVN MVCAGLRNSI PKSIVYCQVR EAKRSLLDHF FAELGTMDMK RLSSLLNEDP AIMERRSAIS KRLELYRAAQ
601: SEIDAVAWSK
Arabidopsis Description
DRP1ARSW9 [Source:UniProtKB/TrEMBL;Acc:A0A178UEJ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.