Factsheet for Bra025448.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra008838.1-P
Bra017901.1-P
Bra018615.1-P
Bra025448.1-P
Bra028525.1-P
Bra030733.1-P
Bra035381.1-P
Bra035433.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42080.1	Bra018615.1-P	AT1G08560.1	19959995
AT5G42080.1	Bra030733.1-P	AT1G08560.1	19959995
AT5G42080.1	Bra017901.1-P	AT1G59610.1	20231465
AT5G42080.1	Bra035433.1-P	AT1G59610.1	20231465
AT5G42080.1	Bra008838.1-P	AT5G13300.1	15923323
AT5G42080.1	Bra035381.1-P	AT5G35750.1	18642946
AT5G42080.1	Bra025448.1-P	AT5G42080.1	19144001
AT5G42080.1	Bra028525.1-P	AT5G42080.1	19144001
AT5G42080.1	Bra025448.1-P	AT5G42080.1	20231465
AT5G42080.1	Bra028525.1-P	AT5G42080.1	20231465

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27661	Canola	cytosol	99.14	94.75
CDX99702	Canola	cytosol	98.8	94.43
CDY13364	Canola	cytosol	98.8	94.43
Bra028525.1-P	Field mustard	cytosol	98.8	94.43
AT5G42080.1	Thale cress	cytosol	97.43	93.11
KRH27831	Soybean	cytosol, endoplasmic reticulum, nucleus	86.96	83.11
KRH77654	Soybean	endoplasmic reticulum	86.96	83.11
KRH60047	Soybean	endoplasmic reticulum	86.11	82.3
KRH41321	Soybean	endoplasmic reticulum, nucleus	85.59	81.8
GSMUA_Achr1P04880_001	Banana	cytosol	84.56	80.82
Os05t0556100-01	Rice	plasma membrane	84.05	80.46
EES19921	Sorghum	cytosol	83.53	79.97
Os01t0681100-01	Rice	cytosol, plasma membrane	25.21	79.89
TraesCS1B01G411700.3	Wheat	cytosol	82.5	78.98
TraesCS1A01G385400.2	Wheat	cytosol, golgi, nucleus, unclear	82.16	78.65
TraesCS1D01G393000.2	Wheat	cytosol	82.16	78.65
Bra003469.1-P	Field mustard	cytosol	76.16	77.22
EES01270	Sorghum	cytosol	80.62	77.18
Zm00001d009504_P002	Maize	cytosol	83.7	74.39
Zm00001d038955_P001	Maize	cytosol, mitochondrion, plasma membrane	83.53	72.69
HORVU1Hr1G084970.2	Barley	plasma membrane	82.5	71.15
Bra007513.1-P	Field mustard	cytosol	67.75	63.2
Bra026801.1-P	Field mustard	cytosol	66.55	63.19
Bra016679.1-P	Field mustard	cytosol	66.04	62.7
Bra014507.1-P	Field mustard	cytosol	66.55	61.98
Bra037643.1-P	Field mustard	cytosol	64.32	60.68
TraesCS6B01G443600.1	Wheat	cytosol	41.68	46.46
TraesCS6D01G385300.1	Wheat	cytosol	37.74	44.44
Bra034579.1-P	Field mustard	cytosol	34.99	25.28
Bra011458.1-P	Field mustard	cytosol	34.99	25.28
Bra036991.1-P	Field mustard	cytosol	34.82	25.15
Bra031505.1-P	Field mustard	cytosol	23.33	23.78
Bra027151.1-P	Field mustard	cytosol	26.76	23.11
Bra031502.1-P	Field mustard	cytosol	25.21	22.48
Bra010250.1-P	Field mustard	cytosol	14.41	21.27
Bra018449.1-P	Field mustard	cytosol	28.3	18.07
Bra031707.1-P	Field mustard	cytosol	27.79	17.7
Bra019950.1-P	Field mustard	cytosol	27.79	17.25
Bra017901.1-P	Field mustard	cytosol	27.62	17.04
Bra035433.1-P	Field mustard	cytosol	27.79	16.18
Bra038229.1-P	Field mustard	cytosol	19.9	14.76
Bra038100.1-P	Field mustard	cytosol	20.58	14.63
Bra037604.1-P	Field mustard	plastid	15.78	11.95
Bra031511.1-P	Field mustard	cytosol	11.32	10.68

Protein Annotations

Gene3D:1.20.120.1240	MapMan:22.1.7.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra025448	EnsemblPlants:Bra025448.1	EnsemblPlants:Bra025448.1-P
InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381	UniProt:M4E9J2	InterPro:P-loop_NTPase
PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS51388
PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF58	SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540
UniParc:UPI0002543876	SEG:seg	:	:	:	:

Description

AT5G42080 (E=1e-283) ADL1, ADL1A, AG68, DRP1A, RSW9 | ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding / GTPase/ protein binding

Coordinates

chrA04:-:8679708..8684101

Molecular Weight (calculated)

65291.7 Da

IEP (calculated)

8.026

GRAVY (calculated)

-0.302

Length

583 amino acids

Sequence
(BLAST)

001: MENLISLVNK IQRACTALGD HGDSSALPTL WDSLPAIAVV GGQSSGKSSV LESIVGKDFL PRGSGIVTRR PLVLQLQKID DGAREYAEFL HLPRKRFTDF
101: AAVRKEIQDE TDRETGRSKA ISSVPIHLSI YSPNVVNLTL IDLPGLTKVA VEGQSENIVK DIENMVRSYI EKPNCIILAI SPANQDLATS DAIKISREVD
201: PSGERTFGVL TKIDLMDKGT DAVEILEGKS FKLKYPWVGV VNRSQADINK NVDMIAARRR EREYFSNTTE YRHLAHKMGS EHLAKMLSKH LEHVIKSRIP
301: GIQSLINKTV LELESELSRL GKPIAADAGG KLYSIMEICR LFDQIFKEHL DGVRAGGEKV YNVFDNQLPA ALKRLQFDKQ LAMDNIRKLV TEADGYQPHL
401: IAPEQGYRRL IESSIVSIRG PAEASVDTVH AILKDLVHKS VTETVELKQY PALRVEVTNA AIESLDKMRE GSKKATLQLV DMECSYLTVD FFRKLPQDAE
501: KGGNPTHSIF DRYNDSYLRR IAREAKRILL DHFFAELGTM DMKRLSSLLN EDPAIMERRS AISKRLELYR AAQSEIDAVA WSK

Best Arabidopsis Sequence Match ( AT5G42080.1 )
(BLAST)

001: MENLISLVNK IQRACTALGD HGDSSALPTL WDSLPAIAVV GGQSSGKSSV LESIVGKDFL PRGSGIVTRR PLVLQLQKID DGTREYAEFL HLPRKKFTDF
101: AAVRKEIQDE TDRETGRSKA ISSVPIHLSI YSPNVVNLTL IDLPGLTKVA VDGQSDSIVK DIENMVRSYI EKPNCIILAI SPANQDLATS DAIKISREVD
201: PSGDRTFGVL TKIDLMDKGT DAVEILEGRS FKLKYPWVGV VNRSQADINK NVDMIAARKR EREYFSNTTE YRHLANKMGS EHLAKMLSKH LERVIKSRIP
301: GIQSLINKTV LELETELSRL GKPIAADAGG KLYSIMEICR LFDQIFKEHL DGVRAGGEKV YNVFDNQLPA ALKRLQFDKQ LAMDNIRKLV TEADGYQPHL
401: IAPEQGYRRL IESSIVSIRG PAEASVDTVH AILKDLVHKS VNETVELKQY PALRVEVTNA AIESLDKMRE GSKKATLQLV DMECSYLTVD FFRKLPQDVE
501: KGGNPTHSIF DRYNDSYLRR IGSNVLSYVN MVCAGLRNSI PKSIVYCQVR EAKRSLLDHF FAELGTMDMK RLSSLLNEDP AIMERRSAIS KRLELYRAAQ
601: SEIDAVAWSK

Arabidopsis Description

DRP1ARSW9 [Source:UniProtKB/TrEMBL;Acc:A0A178UEJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.