Factsheet for Bra035433.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000163.1-P
Bra016679.1-P
Bra017039.1-P
Bra017901.1-P
Bra025448.1-P
Bra026801.1-P
Bra028525.1-P
Bra035433.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G59610.1	Bra016679.1-P	AT1G14830.1	21798944
AT1G59610.1	Bra026801.1-P	AT1G14830.1	21798944
AT1G59610.1	Bra017901.1-P	AT1G59610.1	25462567
AT1G59610.1	Bra035433.1-P	AT1G59610.1	25462567
AT1G59610.1	Bra000163.1-P	AT2G40060.1	20231465
AT1G59610.1	Bra017039.1-P	AT2G40060.1	20231465
AT1G59610.1	Bra025448.1-P	AT5G42080.1	20231465
AT1G59610.1	Bra028525.1-P	AT5G42080.1	20231465

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44550	Canola	cytosol	95.8	99.48
CDY45889	Canola	cytosol	91.11	99.13
AT1G59610.1	Thale cress	cytosol	88.41	96.2
Bra017901.1-P	Field mustard	cytosol	89.31	94.6
Bra018449.1-P	Field mustard	cytosol	81.82	89.7
Bra031707.1-P	Field mustard	cytosol	81.72	89.4
Bra019950.1-P	Field mustard	cytosol	83.12	88.6
VIT_18s0089g00350.t01	Wine grape	cytosol	74.33	79.91
KRH27552	Soybean	cytosol	71.73	77.87
KRH36411	Soybean	endoplasmic reticulum, nucleus	71.63	77.77
GSMUA_Achr7P05530_001	Banana	nucleus	70.13	76.22
GSMUA_Achr1P18350_001	Banana	cytosol	67.93	76.06
GSMUA_Achr4P20040_001	Banana	cytosol	69.53	75.73
EER88160	Sorghum	cytosol, endoplasmic reticulum, nucleus	67.83	74.37
GSMUA_Achr3P01090_001	Banana	nucleus	68.03	74.18
VIT_15s0107g00170.t01	Wine grape	cytosol	17.38	74.04
Zm00001d037279_P005	Maize	plasma membrane	67.53	74.04
EES05560	Sorghum	nucleus	67.63	73.51
Zm00001d017979_P002	Maize	extracellular, mitochondrion	67.63	73.51
Zm00001d044757_P006	Maize	cytosol, nucleus, plasma membrane	66.83	73.27
TraesCS7D01G200900.1	Wheat	golgi, unclear	65.83	72.98
TraesCS7A01G198100.1	Wheat	cytosol, nucleus, plasma membrane	65.73	72.87
TraesCS7B01G104500.1	Wheat	golgi, unclear	65.63	72.76
Os06t0247800-01	Rice	plasma membrane	66.03	72.56
HORVU7Hr1G040670.2	Barley	cytosol, nucleus, plasma membrane	65.33	72.51
TraesCS6D01G291700.1	Wheat	nucleus	65.13	72.2
Os02t0738900-01	Rice	plasma membrane	66.33	71.94
TraesCS6A01G312300.3	Wheat	nucleus	65.23	71.76
TraesCS6B01G342500.2	Wheat	cytosol	63.24	68.58
KXG25176	Sorghum	cytosol	51.15	68.09
Os08t0425100-01	Rice	plasma membrane	52.05	68.02
HORVU6Hr1G077000.1	Barley	cytosol, mitochondrion, nucleus	65.73	67.77
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	17.38	65.66
Zm00001d032256_P001	Maize	cytosol	53.15	57.2
Zm00001d051815_P002	Maize	cytosol	29.57	53.92
Bra007513.1-P	Field mustard	cytosol	18.58	29.76
Bra014507.1-P	Field mustard	cytosol	18.48	29.55
Bra003469.1-P	Field mustard	cytosol	16.78	29.22
Bra037643.1-P	Field mustard	cytosol	17.88	28.96
Bra026801.1-P	Field mustard	cytosol	17.38	28.34
Bra028525.1-P	Field mustard	cytosol	17.18	28.2
Bra016679.1-P	Field mustard	cytosol	17.28	28.18
Bra025448.1-P	Field mustard	cytosol	16.18	27.79
Bra036991.1-P	Field mustard	cytosol	15.28	18.96
Bra011458.1-P	Field mustard	cytosol	15.18	18.84
Bra034579.1-P	Field mustard	cytosol	15.08	18.71
Bra010250.1-P	Field mustard	cytosol	6.29	15.95
Bra027151.1-P	Field mustard	cytosol	10.69	15.85
Bra031505.1-P	Field mustard	cytosol	8.99	15.73
Bra031502.1-P	Field mustard	cytosol	10.19	15.6
Bra038229.1-P	Field mustard	cytosol	10.99	13.99
Bra038100.1-P	Field mustard	cytosol	10.59	12.93
Bra037604.1-P	Field mustard	plastid	8.69	11.3
HORVU4Hr1G074040.2	Barley	nucleus	2.6	10.16
HORVU5Hr1G092990.14	Barley	cytosol	2.6	9.81
Bra031511.1-P	Field mustard	cytosol	5.99	9.71
HORVU4Hr1G073960.12	Barley	cytosol	3.6	9.02

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:2.30.29.30	MapMan:22.1.7.2	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra035433	EnsemblPlants:Bra035433.1
EnsemblPlants:Bra035433.1-P	ncoils:Coil	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF	InterPro:Dynamin_central
InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR001849	InterPro:IPR011993
InterPro:IPR020850	InterPro:IPR030381	UniProt:M4F2Y3	InterPro:P-loop_NTPase	PFAM:PF00169	PFAM:PF00350
PFAM:PF01031	PFAM:PF02212	InterPro:PH-like_dom_sf	InterPro:PH_domain	PRINTS:PR00195	ScanProsite:PS00410
PFscan:PS50003	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF57	SMART:SM00053
SMART:SM00233	SUPFAM:SSF50729	SUPFAM:SSF52540	UniParc:UPI00025448DD	SEG:seg	:

Description

AT1G59610 (E=0.0) ADL3, CF1 | ADL3 (ARABIDOPSIS DYNAMIN-LIKE 3); GTPase

Coordinates

chrA01:+:16321481..16330230

Molecular Weight (calculated)

108420.0 Da

IEP (calculated)

9.186

GRAVY (calculated)

-0.492

Length

1001 amino acids

Sequence
(BLAST)

0001: MEAIDELSQL SDSMRQAAAL LADEDPDESS SSSRRPATSL NVVALGNVGA GKSAVLNSLI GHPVLPTGEN GATRAPIIID LSREESLSSK AIILQIDNKS
0101: QQVSASALRH SLQDRLSKGA TGRGRDEIYL KLRTSTAPPL KLIDLPGLDQ RIVDDSMIGE HAQHNDAILL VVVPASQASE ISSSRALKIA KEYDSDSTRT
0201: VGIISKIDQA AENPKALAAV QALLSNQGPP KTTDIPWVAL IGQSVAIASA QSGGSENSLE TAWRAESESL KSILTGAPQS KLGRIALVDT LASQIRSRMK
0301: LRLPNILSGL QGKSQIVQDE LSRLGEQLVS SAEGTRAIAL ELCREFEDKF LLHLAGGEGS GWKVVASFEG NFPNRIKQLP LDRYFDLNNV KRIVLEADGY
0401: QPYLISPEKG WRSLIKIVLE LAKDPARLCV DEVHRVLVDI VSASANATPG LGRYPPFKRE VVAIASAALD GFKNEAKKMV VALVDMERAF VPPQHFIRLV
0501: QRRMERQRRE DELKGRSSRK GQDAEQSLLN RASSPQPEGS STGGSLKSLK DKFLPQDKDK DKDKETPEVS GLKTAGPEGE ITAGYLLKKS AKTNGWSRRW
0601: FVLNEKTGKL GYTKKQEERN FRGTVTLEEC SIEEISDDDG EKSKSSKDKK SNGPDSKGPG LVFKITCRVP YKTVLKAHNA LVLKAESMVD KNEWINKLQK
0701: VIQARGGQVG GASMRQSFSE GSLDKMVRKP VDPEEELRWM SQEVRGYVEA VLNSLAANVP KAVVLCQVEK SKEDMLNQLY SSISAIGNER IESLIQEDQN
0801: VKRKRDRYEK QSSLLSKLTR QLSIHDNRAA AASSWSDSGT ESSPKTNGGS TGEDWMNAFN AAASGQDSLK RYGSGGHSRR YSDPAQNGED DSSGSGGSNR
0901: RTTPNRLPPA PPQSGGSSYR GPQASGEHNL SPVGLTSPSP GGLSGPCTSS VKISLANISD VSIHTVLSIV KYIPGTGDEA RVNRLTIPLT EHFNFKGCTV
1001: V

Best Arabidopsis Sequence Match ( AT1G59610.1 )
(BLAST)

001: MEAIDELSQL SDSMRQAASL LADEDPDETS SSRRPATSLN VVALGNVGAG KSAVLNSLIG HPVLPTGENG ATRAPIIIDL SREESLSSKA IILQIDNKNQ
101: QVSASALRHS LQDRLSKGAS GRGRDEIYLK LRTSTAPPLK LIDLPGLDQR IVDDSMIGEH AQHNDAILLV VVPASQASEI SSSRALKIAK EYDPESTRTV
201: GIISKIDQAA ENPKSLAAVQ ALLSNQGPPK TTDIPWVALI GQSVSIASAQ SGGSENSLET AWRAESESLK SILTGAPQSK LGRIALVDTL ASQIRSRMKL
301: RLPNILTGLQ GKSQIVQDEL ARLGEQLVSS AEGTRAIALE LCREFEDKFL LHLAGGEGSG WKVVASFEGN FPNRIKKLPL DRHFDLNNVK RIVLEADGYQ
401: PYLISPEKGL RSLIKTVLEL AKDPARLCVD EVHRVLVDIV SASANATPGL GRYPPFKREV VAIASAALDG FKNEAKKMVV ALVDMERAFV PPQHFIRLVQ
501: RRMERQRREE ELKGRSSKKG QDAEQSLLNR ATSPQPDGPS STGGSLKSLR DKLMPQDKDK DKEKETPEVS GLKTAGPEGE ITAGYLMKKS AKTNGWSRRW
601: FVLNEKTGKL GYTKKQEERN FRGTVTLEEC SIEEISDDEG EKSKSSKDKK SNGPDSKGPG LVFKITCRVP YKTVLKAHNA LVLKAESMVD KNEWINKLQK
701: VIQARGGQVG SASMRQSLSE GSLDKMVRKP VDPEEELRWM SQEVRGYVEA VLNSLAANVP KAVVLCQVEK SKEDMLNQLY SSISAIGNER IESLIQEDQN
801: VKRRRDRYQK QSSLLSKLTR QLSIHDNRAA AASSWSDNSG TESSPRTNGG SSGEDWMNAF NAAASGPDSL KRYGSGGHSR RYSDPAQNGE DSSGSGGSSR
901: RTTPNRLPPA PPQSGSSYRY

Arabidopsis Description

DRP2BDynamin-2B [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ55]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.